Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.99□□□□□ -1.61
SMC1BQ8NDV3 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.99□□□□□ -1.61
SMC1BQ8NDV3 AC021146.3-201ENST00000511911 260 ntBASIC4.99□□□□□ -1.61
SMC1BQ8NDV3 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.99□□□□□ -1.61
SMC1BQ8NDV3 RNU6-718P-201ENST00000516166 105 ntBASIC4.99□□□□□ -1.61
SMC1BQ8NDV3 RN7SKP57-201ENST00000517248 293 ntBASIC4.99□□□□□ -1.61
SMC1BQ8NDV3 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.99□□□□□ -1.61
SMC1BQ8NDV3 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC4.99□□□□□ -1.61
SMC1BQ8NDV3 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
SMC1BQ8NDV3 AC068446.3-201ENST00000555285 382 ntBASIC4.99□□□□□ -1.61
SMC1BQ8NDV3 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.99□□□□□ -1.61
SMC1BQ8NDV3 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.99□□□□□ -1.61
SMC1BQ8NDV3 AC079597.1-201ENST00000624306 508 ntBASIC4.99□□□□□ -1.61
SMC1BQ8NDV3 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SMC1BQ8NDV3 MIR6863-201ENST00000636112 90 ntBASIC4.99□□□□□ -1.61
SMC1BQ8NDV3 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SMC1BQ8NDV3 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.99□□□□□ -1.61
SMC1BQ8NDV3 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
SMC1BQ8NDV3 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SMC1BQ8NDV3 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
SMC1BQ8NDV3 AC092435.4-201ENST00000623012 4159 ntBASIC4.99□□□□□ -1.61
SMC1BQ8NDV3 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SMC1BQ8NDV3 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.99□□□□□ -1.61
SMC1BQ8NDV3 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
SMC1BQ8NDV3 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
SMC1BQ8NDV3 AC093535.2-201ENST00000624769 2326 ntBASIC4.98□□□□□ -1.61
SMC1BQ8NDV3 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SMC1BQ8NDV3 PABPC1P7-201ENST00000413177 1513 ntBASIC4.98□□□□□ -1.61
SMC1BQ8NDV3 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.98□□□□□ -1.61
SMC1BQ8NDV3 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
SMC1BQ8NDV3 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SMC1BQ8NDV3 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.98□□□□□ -1.61
SMC1BQ8NDV3 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SMC1BQ8NDV3 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.98□□□□□ -1.61
SMC1BQ8NDV3 RNU6-195P-201ENST00000411352 109 ntBASIC4.98□□□□□ -1.61
SMC1BQ8NDV3 AC022028.1-201ENST00000412054 408 ntBASIC4.98□□□□□ -1.61
SMC1BQ8NDV3 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.98□□□□□ -1.61
SMC1BQ8NDV3 USP9YP36-201ENST00000424581 829 ntBASIC4.98□□□□□ -1.61
SMC1BQ8NDV3 AC233728.2-201ENST00000425348 757 ntBASIC4.98□□□□□ -1.61
SMC1BQ8NDV3 AL589872.1-201ENST00000426602 288 ntBASIC4.98□□□□□ -1.61
SMC1BQ8NDV3 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.98□□□□□ -1.61
SMC1BQ8NDV3 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC4.98□□□□□ -1.61
SMC1BQ8NDV3 AL358934.1-201ENST00000432346 324 ntBASIC4.98□□□□□ -1.61
SMC1BQ8NDV3 AL159987.2-201ENST00000432754 307 ntBASIC4.98□□□□□ -1.61
SMC1BQ8NDV3 AL596276.1-201ENST00000434465 418 ntBASIC4.98□□□□□ -1.61
SMC1BQ8NDV3 UBE2V1P13-201ENST00000436983 439 ntBASIC4.98□□□□□ -1.61
SMC1BQ8NDV3 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.98□□□□□ -1.61
SMC1BQ8NDV3 MTATP6P30-201ENST00000443540 664 ntBASIC4.98□□□□□ -1.61
SMC1BQ8NDV3 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SMC1BQ8NDV3 IFNWP4-201ENST00000453148 294 ntBASIC4.98□□□□□ -1.61
SMC1BQ8NDV3 RBM43P1-201ENST00000476891 1081 ntBASIC4.98□□□□□ -1.61
SMC1BQ8NDV3 AF213884.1-201ENST00000488102 463 ntBASIC4.98□□□□□ -1.61
SMC1BQ8NDV3 MTAPP1-201ENST00000489154 819 ntBASIC4.98□□□□□ -1.61
SMC1BQ8NDV3 RN7SL323P-201ENST00000494712 295 ntBASIC4.98□□□□□ -1.61
SMC1BQ8NDV3 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SMC1BQ8NDV3 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC4.98□□□□□ -1.61
SMC1BQ8NDV3 RN7SKP234-201ENST00000517173 224 ntBASIC4.98□□□□□ -1.61
SMC1BQ8NDV3 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC4.98□□□□□ -1.61
SMC1BQ8NDV3 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.98□□□□□ -1.61
SMC1BQ8NDV3 AC009101.1-201ENST00000568135 242 ntBASIC4.98□□□□□ -1.61
SMC1BQ8NDV3 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.98□□□□□ -1.61
SMC1BQ8NDV3 AL161734.1-201ENST00000609720 557 ntBASIC4.98□□□□□ -1.61
SMC1BQ8NDV3 AL158196.1-201ENST00000616786 434 ntBASIC4.98□□□□□ -1.61
SMC1BQ8NDV3 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC4.98□□□□□ -1.61
SMC1BQ8NDV3 FP236240.3-201ENST00000623061 327 ntBASIC4.98□□□□□ -1.61
SMC1BQ8NDV3 AL157786.1-207ENST00000627771 695 ntBASIC4.98□□□□□ -1.61
SMC1BQ8NDV3 AC055839.1-201ENST00000634467 498 ntBASIC4.98□□□□□ -1.61
SMC1BQ8NDV3 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.98□□□□□ -1.61
SMC1BQ8NDV3 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.98□□□□□ -1.61
SMC1BQ8NDV3 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.98□□□□□ -1.61
SMC1BQ8NDV3 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SMC1BQ8NDV3 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SMC1BQ8NDV3 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
SMC1BQ8NDV3 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
SMC1BQ8NDV3 RNU6-359P-201ENST00000365466 108 ntBASIC4.97□□□□□ -1.61
SMC1BQ8NDV3 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC4.97□□□□□ -1.61
SMC1BQ8NDV3 U3.20-201ENST00000390909 217 ntBASIC4.97□□□□□ -1.61
SMC1BQ8NDV3 AC078974.1-201ENST00000411597 223 ntBASIC4.97□□□□□ -1.61
SMC1BQ8NDV3 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC4.97□□□□□ -1.61
SMC1BQ8NDV3 DPPA2P1-201ENST00000428060 556 ntBASIC4.97□□□□□ -1.61
SMC1BQ8NDV3 TIMM9P3-201ENST00000428659 274 ntBASIC4.97□□□□□ -1.61
SMC1BQ8NDV3 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC4.97□□□□□ -1.61
SMC1BQ8NDV3 HSPD1P21-201ENST00000436541 245 ntBASIC4.97□□□□□ -1.61
SMC1BQ8NDV3 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.97□□□□□ -1.61
SMC1BQ8NDV3 MTND4P18-201ENST00000447010 465 ntBASIC4.97□□□□□ -1.61
SMC1BQ8NDV3 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC4.97□□□□□ -1.61
SMC1BQ8NDV3 BX510359.1-201ENST00000456973 237 ntBASIC4.97□□□□□ -1.61
SMC1BQ8NDV3 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC4.97□□□□□ -1.61
SMC1BQ8NDV3 RPL37P6-202ENST00000464216 403 ntBASIC4.97□□□□□ -1.61
SMC1BQ8NDV3 MTCO3P38-201ENST00000468910 766 ntBASIC4.97□□□□□ -1.61
SMC1BQ8NDV3 AC021382.1-201ENST00000483523 359 ntBASIC4.97□□□□□ -1.61
SMC1BQ8NDV3 COX7A2P2-201ENST00000505291 250 ntBASIC4.97□□□□□ -1.61
SMC1BQ8NDV3 HMGB1P29-201ENST00000505659 499 ntBASIC4.97□□□□□ -1.61
SMC1BQ8NDV3 MTCO3P44-201ENST00000510977 541 ntBASIC4.97□□□□□ -1.61
SMC1BQ8NDV3 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC4.97□□□□□ -1.61
SMC1BQ8NDV3 AP003181.2-201ENST00000528941 181 ntBASIC4.97□□□□□ -1.61
SMC1BQ8NDV3 AL161713.1-201ENST00000555538 145 ntBASIC4.97□□□□□ -1.61
SMC1BQ8NDV3 AP005205.1-201ENST00000563503 508 ntBASIC4.97□□□□□ -1.61
SMC1BQ8NDV3 AC099489.2-201ENST00000574976 260 ntBASIC4.97□□□□□ -1.61
SMC1BQ8NDV3 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms