Protein–RNA interactions for Protein: Q8NCR9

CLRN3, Clarin-3, humanhuman

Predictions only

Length 226 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3Q8NCR9 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC4.17□□□□□ -1.74
CLRN3Q8NCR9 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC4.17□□□□□ -1.74
CLRN3Q8NCR9 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
CLRN3Q8NCR9 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC4.17□□□□□ -1.74
CLRN3Q8NCR9 OR11H5P-201ENST00000554039 926 ntBASIC4.17□□□□□ -1.74
CLRN3Q8NCR9 AL118558.2-201ENST00000556294 238 ntBASIC4.17□□□□□ -1.74
CLRN3Q8NCR9 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC4.17□□□□□ -1.74
CLRN3Q8NCR9 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC4.17□□□□□ -1.74
CLRN3Q8NCR9 ATP5J2P6-201ENST00000565203 266 ntBASIC4.17□□□□□ -1.74
CLRN3Q8NCR9 MT1CP-201ENST00000567054 174 ntBASIC4.17□□□□□ -1.74
CLRN3Q8NCR9 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
CLRN3Q8NCR9 RPL23AP87-202ENST00000573039 466 ntBASIC4.17□□□□□ -1.74
CLRN3Q8NCR9 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC4.17□□□□□ -1.74
CLRN3Q8NCR9 MIR4311-201ENST00000580794 100 ntBASIC4.17□□□□□ -1.74
CLRN3Q8NCR9 MIR3941-201ENST00000582572 103 ntBASIC4.17□□□□□ -1.74
CLRN3Q8NCR9 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC4.17□□□□□ -1.74
CLRN3Q8NCR9 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC4.17□□□□□ -1.74
CLRN3Q8NCR9 AL139395.1-201ENST00000603662 160 ntBASIC4.17□□□□□ -1.74
CLRN3Q8NCR9 MIR15A-201ENST00000607334 83 ntBASIC4.17□□□□□ -1.74
CLRN3Q8NCR9 AC007497.1-201ENST00000610421 561 ntBASIC4.17□□□□□ -1.74
CLRN3Q8NCR9 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC4.17□□□□□ -1.74
CLRN3Q8NCR9 AL021918.2-201ENST00000613415 194 ntBASIC4.17□□□□□ -1.74
CLRN3Q8NCR9 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC4.17□□□□□ -1.74
CLRN3Q8NCR9 AC005086.4-201ENST00000623065 213 ntBASIC4.17□□□□□ -1.74
CLRN3Q8NCR9 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC4.17□□□□□ -1.74
CLRN3Q8NCR9 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.17□□□□□ -1.74
CLRN3Q8NCR9 AC011266.1-201ENST00000624119 3569 ntBASIC4.17□□□□□ -1.74
CLRN3Q8NCR9 ANKRD26P2-201ENST00000445530 1710 ntBASIC4.17□□□□□ -1.74
CLRN3Q8NCR9 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
CLRN3Q8NCR9 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.17□□□□□ -1.74
CLRN3Q8NCR9 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.17□□□□□ -1.74
CLRN3Q8NCR9 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CLRN3Q8NCR9 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
CLRN3Q8NCR9 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.16□□□□□ -1.74
CLRN3Q8NCR9 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.16□□□□□ -1.74
CLRN3Q8NCR9 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CLRN3Q8NCR9 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CLRN3Q8NCR9 MARK2P15-201ENST00000432204 2186 ntBASIC4.16□□□□□ -1.74
CLRN3Q8NCR9 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
CLRN3Q8NCR9 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CLRN3Q8NCR9 RNU6-1167P-201ENST00000363227 94 ntBASIC4.16□□□□□ -1.74
CLRN3Q8NCR9 RN7SKP153-201ENST00000365026 316 ntBASIC4.16□□□□□ -1.74
CLRN3Q8NCR9 SNORA64.3-201ENST00000365647 134 ntBASIC4.16□□□□□ -1.74
CLRN3Q8NCR9 Y_RNA.378-201ENST00000365652 113 ntBASIC4.16□□□□□ -1.74
CLRN3Q8NCR9 RNU6-741P-201ENST00000383889 107 ntBASIC4.16□□□□□ -1.74
CLRN3Q8NCR9 Y_RNA.399-201ENST00000383955 105 ntBASIC4.16□□□□□ -1.74
CLRN3Q8NCR9 RNU6-434P-201ENST00000384376 107 ntBASIC4.16□□□□□ -1.74
CLRN3Q8NCR9 RNU6-393P-201ENST00000384475 107 ntBASIC4.16□□□□□ -1.74
CLRN3Q8NCR9 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
CLRN3Q8NCR9 AL157702.1-201ENST00000398764 426 ntBASIC4.16□□□□□ -1.74
CLRN3Q8NCR9 AL133270.1-201ENST00000402635 279 ntBASIC4.16□□□□□ -1.74
CLRN3Q8NCR9 AL009179.1-201ENST00000406085 265 ntBASIC4.16□□□□□ -1.74
CLRN3Q8NCR9 RN7SKP146-201ENST00000410242 334 ntBASIC4.16□□□□□ -1.74
CLRN3Q8NCR9 POLHP1-201ENST00000411806 470 ntBASIC4.16□□□□□ -1.74
CLRN3Q8NCR9 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.16□□□□□ -1.74
CLRN3Q8NCR9 GAS5-202ENST00000414075 413 ntTSL 2 BASIC4.16□□□□□ -1.74
CLRN3Q8NCR9 BX842559.1-201ENST00000419615 532 ntBASIC4.16□□□□□ -1.74
CLRN3Q8NCR9 RPL24P2-201ENST00000421023 475 ntBASIC4.16□□□□□ -1.74
CLRN3Q8NCR9 AL645936.1-201ENST00000441979 518 ntBASIC4.16□□□□□ -1.74
CLRN3Q8NCR9 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC4.16□□□□□ -1.74
CLRN3Q8NCR9 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.16□□□□□ -1.74
CLRN3Q8NCR9 VN1R17P-201ENST00000472048 1090 ntBASIC4.16□□□□□ -1.74
CLRN3Q8NCR9 AC104136.1-201ENST00000512969 394 ntBASIC4.16□□□□□ -1.74
CLRN3Q8NCR9 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.16□□□□□ -1.74
CLRN3Q8NCR9 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC4.16□□□□□ -1.74
CLRN3Q8NCR9 RNU4-49P-201ENST00000516080 140 ntBASIC4.16□□□□□ -1.74
CLRN3Q8NCR9 RNU6-189P-201ENST00000516120 101 ntBASIC4.16□□□□□ -1.74
CLRN3Q8NCR9 RNU6-1038P-201ENST00000516516 104 ntBASIC4.16□□□□□ -1.74
CLRN3Q8NCR9 RNU6-914P-201ENST00000516749 109 ntBASIC4.16□□□□□ -1.74
CLRN3Q8NCR9 RNU7-30P-201ENST00000516835 62 ntBASIC4.16□□□□□ -1.74
CLRN3Q8NCR9 RPL23AP53-201ENST00000521854 457 ntBASIC4.16□□□□□ -1.74
CLRN3Q8NCR9 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC4.16□□□□□ -1.74
CLRN3Q8NCR9 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC4.16□□□□□ -1.74
CLRN3Q8NCR9 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.16□□□□□ -1.74
CLRN3Q8NCR9 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC4.16□□□□□ -1.74
CLRN3Q8NCR9 AC005498.1-201ENST00000592125 465 ntBASIC4.16□□□□□ -1.74
CLRN3Q8NCR9 AC092747.3-201ENST00000603769 301 ntBASIC4.16□□□□□ -1.74
CLRN3Q8NCR9 IGKV2OR2-1-201ENST00000605129 304 ntBASIC4.16□□□□□ -1.74
CLRN3Q8NCR9 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC4.16□□□□□ -1.74
CLRN3Q8NCR9 AC068726.1-201ENST00000610993 341 ntBASIC4.16□□□□□ -1.74
CLRN3Q8NCR9 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC4.16□□□□□ -1.74
CLRN3Q8NCR9 AC090607.5-201ENST00000615692 224 ntBASIC4.16□□□□□ -1.74
CLRN3Q8NCR9 AL445363.3-201ENST00000623080 671 ntBASIC4.16□□□□□ -1.74
CLRN3Q8NCR9 AC010325.3-201ENST00000641084 394 ntBASIC4.16□□□□□ -1.74
CLRN3Q8NCR9 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.16□□□□□ -1.74
CLRN3Q8NCR9 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.16□□□□□ -1.74
CLRN3Q8NCR9 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CLRN3Q8NCR9 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.16□□□□□ -1.74
CLRN3Q8NCR9 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.74
CLRN3Q8NCR9 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.15□□□□□ -1.74
CLRN3Q8NCR9 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CLRN3Q8NCR9 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.15□□□□□ -1.74
CLRN3Q8NCR9 SELENOWP1-201ENST00000322792 252 ntBASIC4.15□□□□□ -1.75
CLRN3Q8NCR9 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.15□□□□□ -1.75
CLRN3Q8NCR9 RNU6-715P-201ENST00000365204 103 ntBASIC4.15□□□□□ -1.75
CLRN3Q8NCR9 Y_RNA.356-201ENST00000365475 113 ntBASIC4.15□□□□□ -1.75
CLRN3Q8NCR9 RNU6-1013P-201ENST00000384180 107 ntBASIC4.15□□□□□ -1.75
CLRN3Q8NCR9 MIR93-201ENST00000385024 80 ntBASIC4.15□□□□□ -1.75
CLRN3Q8NCR9 SNORD70.1-201ENST00000391007 85 ntBASIC4.15□□□□□ -1.75
CLRN3Q8NCR9 AL356432.1-201ENST00000405809 419 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 126.5 ms