Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 AP001486.2-201ENST00000561652 5113 ntBASIC4.13□□□□□ -1.75
VPS52Q8N1B4 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.13□□□□□ -1.75
VPS52Q8N1B4 AC090337.1-201ENST00000579651 2074 ntBASIC4.13□□□□□ -1.75
VPS52Q8N1B4 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
VPS52Q8N1B4 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.13□□□□□ -1.75
VPS52Q8N1B4 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.13□□□□□ -1.75
VPS52Q8N1B4 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
VPS52Q8N1B4 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
VPS52Q8N1B4 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.12□□□□□ -1.75
VPS52Q8N1B4 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
VPS52Q8N1B4 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.12□□□□□ -1.75
VPS52Q8N1B4 NMD3P1-201ENST00000439704 1488 ntBASIC4.12□□□□□ -1.75
VPS52Q8N1B4 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
VPS52Q8N1B4 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
VPS52Q8N1B4 FGF7P2-201ENST00000332473 296 ntBASIC4.12□□□□□ -1.75
VPS52Q8N1B4 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
VPS52Q8N1B4 RNU6-339P-201ENST00000384310 107 ntBASIC4.12□□□□□ -1.75
VPS52Q8N1B4 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC4.12□□□□□ -1.75
VPS52Q8N1B4 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
VPS52Q8N1B4 RPL17P12-201ENST00000413391 526 ntBASIC4.12□□□□□ -1.75
VPS52Q8N1B4 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC4.12□□□□□ -1.75
VPS52Q8N1B4 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC4.12□□□□□ -1.75
VPS52Q8N1B4 SLC44A3-AS1-205ENST00000424505 612 ntBASIC4.12□□□□□ -1.75
VPS52Q8N1B4 AC007742.1-201ENST00000425789 329 ntBASIC4.12□□□□□ -1.75
VPS52Q8N1B4 AL445669.1-201ENST00000426743 755 ntBASIC4.12□□□□□ -1.75
VPS52Q8N1B4 PSMA2P3-201ENST00000429685 675 ntBASIC4.12□□□□□ -1.75
VPS52Q8N1B4 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC4.12□□□□□ -1.75
VPS52Q8N1B4 AL590233.1-201ENST00000430017 456 ntBASIC4.12□□□□□ -1.75
VPS52Q8N1B4 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC4.12□□□□□ -1.75
VPS52Q8N1B4 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.12□□□□□ -1.75
VPS52Q8N1B4 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC4.12□□□□□ -1.75
VPS52Q8N1B4 RPL37P21-201ENST00000435890 276 ntBASIC4.12□□□□□ -1.75
VPS52Q8N1B4 ELOCP26-201ENST00000436067 329 ntBASIC4.12□□□□□ -1.75
VPS52Q8N1B4 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC4.12□□□□□ -1.75
VPS52Q8N1B4 HSPD1P21-201ENST00000436541 245 ntBASIC4.12□□□□□ -1.75
VPS52Q8N1B4 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.12□□□□□ -1.75
VPS52Q8N1B4 RNU6-956P-201ENST00000458868 103 ntBASIC4.12□□□□□ -1.75
VPS52Q8N1B4 RPL9P32-201ENST00000464118 620 ntBASIC4.12□□□□□ -1.75
VPS52Q8N1B4 AC087312.1-201ENST00000471411 480 ntBASIC4.12□□□□□ -1.75
VPS52Q8N1B4 AC017015.1-201ENST00000477387 286 ntBASIC4.12□□□□□ -1.75
VPS52Q8N1B4 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.12□□□□□ -1.75
VPS52Q8N1B4 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.12□□□□□ -1.75
VPS52Q8N1B4 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.12□□□□□ -1.75
VPS52Q8N1B4 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC4.12□□□□□ -1.75
VPS52Q8N1B4 AC104619.4-201ENST00000510773 249 ntBASIC4.12□□□□□ -1.75
VPS52Q8N1B4 AC093677.1-201ENST00000514414 678 ntBASIC4.12□□□□□ -1.75
VPS52Q8N1B4 IGKV2D-36-201ENST00000518643 226 ntBASIC4.12□□□□□ -1.75
VPS52Q8N1B4 AC022695.1-201ENST00000522089 237 ntBASIC4.12□□□□□ -1.75
VPS52Q8N1B4 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
VPS52Q8N1B4 AC013828.2-201ENST00000532487 235 ntBASIC4.12□□□□□ -1.75
VPS52Q8N1B4 OR8L1P-201ENST00000534005 955 ntBASIC4.12□□□□□ -1.75
VPS52Q8N1B4 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC4.12□□□□□ -1.75
VPS52Q8N1B4 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.12□□□□□ -1.75
VPS52Q8N1B4 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.12□□□□□ -1.75
VPS52Q8N1B4 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.12□□□□□ -1.75
VPS52Q8N1B4 BNIP3P23-201ENST00000599655 511 ntBASIC4.12□□□□□ -1.75
VPS52Q8N1B4 AL009028.1-201ENST00000604895 802 ntBASIC4.12□□□□□ -1.75
VPS52Q8N1B4 AL390208.1-201ENST00000605885 644 ntBASIC4.12□□□□□ -1.75
VPS52Q8N1B4 AC103710.4-201ENST00000609301 899 ntBASIC4.12□□□□□ -1.75
VPS52Q8N1B4 DLEU2_1.1-201ENST00000612089 120 ntBASIC4.12□□□□□ -1.75
VPS52Q8N1B4 DLEU2_1.2-201ENST00000614667 120 ntBASIC4.12□□□□□ -1.75
VPS52Q8N1B4 AL591424.2-201ENST00000617023 128 ntBASIC4.12□□□□□ -1.75
VPS52Q8N1B4 AC015967.1-201ENST00000619893 476 ntBASIC4.12□□□□□ -1.75
VPS52Q8N1B4 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC4.12□□□□□ -1.75
VPS52Q8N1B4 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
VPS52Q8N1B4 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
VPS52Q8N1B4 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.11□□□□□ -1.75
VPS52Q8N1B4 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.11□□□□□ -1.75
VPS52Q8N1B4 MTCO1P24-201ENST00000515438 1558 ntBASIC4.11□□□□□ -1.75
VPS52Q8N1B4 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
VPS52Q8N1B4 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.11□□□□□ -1.75
VPS52Q8N1B4 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
VPS52Q8N1B4 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
VPS52Q8N1B4 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC4.11□□□□□ -1.75
VPS52Q8N1B4 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
VPS52Q8N1B4 RNU6-769P-201ENST00000384407 104 ntBASIC4.11□□□□□ -1.75
VPS52Q8N1B4 RNY3P10-201ENST00000384764 102 ntBASIC4.11□□□□□ -1.75
VPS52Q8N1B4 U3.29-201ENST00000391296 212 ntBASIC4.11□□□□□ -1.75
VPS52Q8N1B4 AMD1P2-201ENST00000412936 992 ntBASIC4.11□□□□□ -1.75
VPS52Q8N1B4 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.11□□□□□ -1.75
VPS52Q8N1B4 MTATP6P27-201ENST00000416987 621 ntBASIC4.11□□□□□ -1.75
VPS52Q8N1B4 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC4.11□□□□□ -1.75
VPS52Q8N1B4 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC4.11□□□□□ -1.75
VPS52Q8N1B4 PSMA6P3-201ENST00000428242 164 ntBASIC4.11□□□□□ -1.75
VPS52Q8N1B4 AC109583.1-201ENST00000432156 268 ntBASIC4.11□□□□□ -1.75
VPS52Q8N1B4 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.11□□□□□ -1.75
VPS52Q8N1B4 MTND1P28-201ENST00000435623 950 ntBASIC4.11□□□□□ -1.75
VPS52Q8N1B4 Z74696.2-201ENST00000436514 498 ntBASIC4.11□□□□□ -1.75
VPS52Q8N1B4 AC083863.1-201ENST00000438811 231 ntBASIC4.11□□□□□ -1.75
VPS52Q8N1B4 AL138799.3-201ENST00000438968 350 ntBASIC4.11□□□□□ -1.75
VPS52Q8N1B4 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC4.11□□□□□ -1.75
VPS52Q8N1B4 RPL29P29-201ENST00000448725 423 ntBASIC4.11□□□□□ -1.75
VPS52Q8N1B4 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.11□□□□□ -1.75
VPS52Q8N1B4 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.11□□□□□ -1.75
VPS52Q8N1B4 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC4.11□□□□□ -1.75
VPS52Q8N1B4 AC104563.1-201ENST00000476147 376 ntBASIC4.11□□□□□ -1.75
VPS52Q8N1B4 AP000797.1-201ENST00000478870 387 ntBASIC4.11□□□□□ -1.75
VPS52Q8N1B4 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC4.11□□□□□ -1.75
VPS52Q8N1B4 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.11□□□□□ -1.75
VPS52Q8N1B4 LAMTOR3P2-201ENST00000504479 232 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 125.4 ms