Protein–RNA interactions for Protein: Q6TFL3

CCDC171, Coiled-coil domain-containing protein 171, humanhuman

Predictions only

Length 1,326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171Q6TFL3 AL137014.1-201ENST00000420490 1226 ntBASIC2.56□□□□□ -2
CCDC171Q6TFL3 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.56□□□□□ -2
CCDC171Q6TFL3 HMGB3P12-201ENST00000438745 556 ntBASIC2.56□□□□□ -2
CCDC171Q6TFL3 AL591719.1-201ENST00000444669 744 ntBASIC2.56□□□□□ -2
CCDC171Q6TFL3 FTH1P25-201ENST00000447665 469 ntBASIC2.56□□□□□ -2
CCDC171Q6TFL3 UBL5P3-201ENST00000475112 231 ntBASIC2.56□□□□□ -2
CCDC171Q6TFL3 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC2.56□□□□□ -2
CCDC171Q6TFL3 AC104090.1-201ENST00000506341 1171 ntBASIC2.56□□□□□ -2
CCDC171Q6TFL3 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC2.56□□□□□ -2
CCDC171Q6TFL3 RNU6-1073P-201ENST00000517182 106 ntBASIC2.56□□□□□ -2
CCDC171Q6TFL3 SUB1P1-201ENST00000524415 382 ntBASIC2.56□□□□□ -2
CCDC171Q6TFL3 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC2.56□□□□□ -2
CCDC171Q6TFL3 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC2.56□□□□□ -2
CCDC171Q6TFL3 AC121758.2-201ENST00000553271 193 ntBASIC2.56□□□□□ -2
CCDC171Q6TFL3 AL121917.1-203ENST00000605534 577 ntBASIC2.56□□□□□ -2
CCDC171Q6TFL3 TUG1_1.1-201ENST00000610654 145 ntBASIC2.56□□□□□ -2
CCDC171Q6TFL3 AC008083.4-201ENST00000615076 444 ntBASIC2.56□□□□□ -2
CCDC171Q6TFL3 AL162233.1-201ENST00000620014 944 ntBASIC2.56□□□□□ -2
CCDC171Q6TFL3 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
CCDC171Q6TFL3 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.55□□□□□ -2
CCDC171Q6TFL3 AC080100.1-201ENST00000624239 5356 ntBASIC2.55□□□□□ -2
CCDC171Q6TFL3 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CCDC171Q6TFL3 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
CCDC171Q6TFL3 SNORA51.11-201ENST00000384442 131 ntBASIC2.55□□□□□ -2
CCDC171Q6TFL3 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.55□□□□□ -2
CCDC171Q6TFL3 SNORA11.4-201ENST00000408823 129 ntBASIC2.55□□□□□ -2
CCDC171Q6TFL3 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
CCDC171Q6TFL3 AC233728.2-201ENST00000425348 757 ntBASIC2.55□□□□□ -2
CCDC171Q6TFL3 MTATP6P4-201ENST00000427725 675 ntBASIC2.55□□□□□ -2
CCDC171Q6TFL3 WASF1P1-201ENST00000447560 1131 ntBASIC2.55□□□□□ -2
CCDC171Q6TFL3 RPL30P9-201ENST00000465586 330 ntBASIC2.55□□□□□ -2
CCDC171Q6TFL3 HMGB1P38-201ENST00000490557 577 ntBASIC2.55□□□□□ -2
CCDC171Q6TFL3 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.55□□□□□ -2
CCDC171Q6TFL3 AC090255.1-201ENST00000495779 349 ntBASIC2.55□□□□□ -2
CCDC171Q6TFL3 AC092436.1-201ENST00000506450 503 ntBASIC2.55□□□□□ -2
CCDC171Q6TFL3 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
CCDC171Q6TFL3 AP000916.1-201ENST00000533869 835 ntBASIC2.55□□□□□ -2
CCDC171Q6TFL3 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.55□□□□□ -2
CCDC171Q6TFL3 AC069304.3-201ENST00000603938 1084 ntBASIC2.55□□□□□ -2
CCDC171Q6TFL3 AC104763.2-201ENST00000604179 382 ntBASIC2.55□□□□□ -2
CCDC171Q6TFL3 AC006329.2-201ENST00000611491 394 ntBASIC2.55□□□□□ -2
CCDC171Q6TFL3 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.55□□□□□ -2
CCDC171Q6TFL3 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.55□□□□□ -2
CCDC171Q6TFL3 CU459211.1-201ENST00000635667 749 ntBASIC2.55□□□□□ -2
CCDC171Q6TFL3 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC2.55□□□□□ -2
CCDC171Q6TFL3 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.55□□□□□ -2
CCDC171Q6TFL3 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.55□□□□□ -2
CCDC171Q6TFL3 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
CCDC171Q6TFL3 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CCDC171Q6TFL3 RNU6-253P-201ENST00000384730 105 ntBASIC2.54□□□□□ -2
CCDC171Q6TFL3 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.54□□□□□ -2
CCDC171Q6TFL3 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.54□□□□□ -2
CCDC171Q6TFL3 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC2.54□□□□□ -2
CCDC171Q6TFL3 HMGN2P30-201ENST00000423237 256 ntBASIC2.54□□□□□ -2
CCDC171Q6TFL3 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.54□□□□□ -2
CCDC171Q6TFL3 AC008481.1-201ENST00000463278 396 ntBASIC2.54□□□□□ -2
CCDC171Q6TFL3 AC090096.1-201ENST00000489168 390 ntBASIC2.54□□□□□ -2
CCDC171Q6TFL3 RPL9P6-201ENST00000492764 598 ntBASIC2.54□□□□□ -2
CCDC171Q6TFL3 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.54□□□□□ -2
CCDC171Q6TFL3 RN7SKP40-201ENST00000517211 242 ntBASIC2.54□□□□□ -2
CCDC171Q6TFL3 AC087808.1-201ENST00000520501 361 ntBASIC2.54□□□□□ -2
CCDC171Q6TFL3 AC104115.2-201ENST00000523026 687 ntBASIC2.54□□□□□ -2
CCDC171Q6TFL3 AP000873.5-201ENST00000533906 236 ntBASIC2.54□□□□□ -2
CCDC171Q6TFL3 OSBPL9P3-201ENST00000534523 595 ntBASIC2.54□□□□□ -2
CCDC171Q6TFL3 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.54□□□□□ -2
CCDC171Q6TFL3 AC010378.1-201ENST00000619270 362 ntBASIC2.54□□□□□ -2
CCDC171Q6TFL3 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC2.54□□□□□ -2
CCDC171Q6TFL3 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.54□□□□□ -2
CCDC171Q6TFL3 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC2.54□□□□□ -2
CCDC171Q6TFL3 AP000553.5-201ENST00000641933 54 ntBASIC2.54□□□□□ -2
CCDC171Q6TFL3 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2.54□□□□□ -2
CCDC171Q6TFL3 AC104454.1-201ENST00000421341 1401 ntBASIC2.54□□□□□ -2
CCDC171Q6TFL3 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CCDC171Q6TFL3 AC092881.1-201ENST00000638218 2733 ntBASIC2.53□□□□□ -2
CCDC171Q6TFL3 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.53□□□□□ -2
CCDC171Q6TFL3 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.53□□□□□ -2
CCDC171Q6TFL3 SNORA64-201ENST00000384674 134 ntBASIC2.53□□□□□ -2
CCDC171Q6TFL3 AL023284.1-201ENST00000403956 276 ntBASIC2.53□□□□□ -2
CCDC171Q6TFL3 HMGB3P2-201ENST00000411913 584 ntBASIC2.53□□□□□ -2
CCDC171Q6TFL3 OR51A3P-201ENST00000413596 924 ntBASIC2.53□□□□□ -2
CCDC171Q6TFL3 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.53□□□□□ -2
CCDC171Q6TFL3 FDX1P2-201ENST00000450769 375 ntBASIC2.53□□□□□ -2
CCDC171Q6TFL3 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.53□□□□□ -2
CCDC171Q6TFL3 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.53□□□□□ -2
CCDC171Q6TFL3 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC2.53□□□□□ -2
CCDC171Q6TFL3 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.53□□□□□ -2
CCDC171Q6TFL3 CDC42P4-201ENST00000510507 563 ntBASIC2.53□□□□□ -2
CCDC171Q6TFL3 HMGB3P3-201ENST00000510526 400 ntBASIC2.53□□□□□ -2
CCDC171Q6TFL3 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.53□□□□□ -2
CCDC171Q6TFL3 AC068313.1-201ENST00000604028 1008 ntBASIC2.53□□□□□ -2
CCDC171Q6TFL3 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.53□□□□□ -2
CCDC171Q6TFL3 MIR4496-201ENST00000635896 61 ntBASIC2.53□□□□□ -2
CCDC171Q6TFL3 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.52□□□□□ -2.01
CCDC171Q6TFL3 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CCDC171Q6TFL3 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CCDC171Q6TFL3 RNU6-50P-201ENST00000362356 103 ntBASIC2.52□□□□□ -2.01
CCDC171Q6TFL3 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.52□□□□□ -2.01
CCDC171Q6TFL3 AC244033.1-201ENST00000426826 870 ntBASIC2.52□□□□□ -2.01
CCDC171Q6TFL3 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CCDC171Q6TFL3 AL157827.1-201ENST00000447622 132 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms