Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 MAPK10-372ENST00000641954 3413 ntBASIC4.31□□□□□ -1.72
PPP4R4Q6NUP7 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.31□□□□□ -1.72
PPP4R4Q6NUP7 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
PPP4R4Q6NUP7 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.31□□□□□ -1.72
PPP4R4Q6NUP7 AC008568.2-201ENST00000623862 2313 ntBASIC4.31□□□□□ -1.72
PPP4R4Q6NUP7 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PPP4R4Q6NUP7 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.31□□□□□ -1.72
PPP4R4Q6NUP7 AL590240.1-201ENST00000334118 313 ntBASIC4.31□□□□□ -1.72
PPP4R4Q6NUP7 SNORD6-201ENST00000365444 73 ntBASIC4.31□□□□□ -1.72
PPP4R4Q6NUP7 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
PPP4R4Q6NUP7 MIR514A1-201ENST00000385133 98 ntBASIC4.31□□□□□ -1.72
PPP4R4Q6NUP7 MIR493-201ENST00000385254 89 ntBASIC4.31□□□□□ -1.72
PPP4R4Q6NUP7 Y_RNA.582-201ENST00000391023 95 ntBASIC4.31□□□□□ -1.72
PPP4R4Q6NUP7 U3.30-201ENST00000391308 210 ntBASIC4.31□□□□□ -1.72
PPP4R4Q6NUP7 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PPP4R4Q6NUP7 MIR298-201ENST00000401212 88 ntBASIC4.31□□□□□ -1.72
PPP4R4Q6NUP7 RNA5SP113-201ENST00000410486 84 ntBASIC4.31□□□□□ -1.72
PPP4R4Q6NUP7 RPL23AP26-201ENST00000412728 464 ntBASIC4.31□□□□□ -1.72
PPP4R4Q6NUP7 MTND3P17-201ENST00000416968 344 ntBASIC4.31□□□□□ -1.72
PPP4R4Q6NUP7 ZNF885P-201ENST00000420174 1098 ntBASIC4.31□□□□□ -1.72
PPP4R4Q6NUP7 NDUFB4P7-201ENST00000423198 363 ntBASIC4.31□□□□□ -1.72
PPP4R4Q6NUP7 AC008850.1-201ENST00000427546 362 ntBASIC4.31□□□□□ -1.72
PPP4R4Q6NUP7 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.31□□□□□ -1.72
PPP4R4Q6NUP7 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.31□□□□□ -1.72
PPP4R4Q6NUP7 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.31□□□□□ -1.72
PPP4R4Q6NUP7 AC073614.1-201ENST00000438690 650 ntBASIC4.31□□□□□ -1.72
PPP4R4Q6NUP7 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.31□□□□□ -1.72
PPP4R4Q6NUP7 ELOCP30-201ENST00000447108 299 ntBASIC4.31□□□□□ -1.72
PPP4R4Q6NUP7 GAPDHP27-201ENST00000447427 1020 ntBASIC4.31□□□□□ -1.72
PPP4R4Q6NUP7 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC4.31□□□□□ -1.72
PPP4R4Q6NUP7 FABP3P2-201ENST00000453169 399 ntBASIC4.31□□□□□ -1.72
PPP4R4Q6NUP7 NANOGP10-201ENST00000453325 895 ntBASIC4.31□□□□□ -1.72
PPP4R4Q6NUP7 MTCYBP1-201ENST00000454315 1119 ntBASIC4.31□□□□□ -1.72
PPP4R4Q6NUP7 AC108059.3-201ENST00000456388 214 ntBASIC4.31□□□□□ -1.72
PPP4R4Q6NUP7 RN7SL354P-201ENST00000469282 294 ntBASIC4.31□□□□□ -1.72
PPP4R4Q6NUP7 AC068305.1-201ENST00000497406 726 ntBASIC4.31□□□□□ -1.72
PPP4R4Q6NUP7 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC4.31□□□□□ -1.72
PPP4R4Q6NUP7 CDC42P4-201ENST00000510507 563 ntBASIC4.31□□□□□ -1.72
PPP4R4Q6NUP7 AC091133.4-201ENST00000511142 308 ntBASIC4.31□□□□□ -1.72
PPP4R4Q6NUP7 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC4.31□□□□□ -1.72
PPP4R4Q6NUP7 SNORA70.14-201ENST00000516205 110 ntBASIC4.31□□□□□ -1.72
PPP4R4Q6NUP7 RNA5SP337-201ENST00000517007 109 ntBASIC4.31□□□□□ -1.72
PPP4R4Q6NUP7 RNU6-64P-201ENST00000517119 105 ntBASIC4.31□□□□□ -1.72
PPP4R4Q6NUP7 RNU6-1220P-201ENST00000517126 108 ntBASIC4.31□□□□□ -1.72
PPP4R4Q6NUP7 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
PPP4R4Q6NUP7 MTCO2P4-201ENST00000517968 247 ntBASIC4.31□□□□□ -1.72
PPP4R4Q6NUP7 DUXAP2-201ENST00000519198 589 ntBASIC4.31□□□□□ -1.72
PPP4R4Q6NUP7 IFITM8P-201ENST00000522529 394 ntBASIC4.31□□□□□ -1.72
PPP4R4Q6NUP7 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.31□□□□□ -1.72
PPP4R4Q6NUP7 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.31□□□□□ -1.72
PPP4R4Q6NUP7 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC4.31□□□□□ -1.72
PPP4R4Q6NUP7 MIR5699-201ENST00000578903 90 ntBASIC4.31□□□□□ -1.72
PPP4R4Q6NUP7 AC022726.1-201ENST00000587475 207 ntBASIC4.31□□□□□ -1.72
PPP4R4Q6NUP7 AC234771.5-201ENST00000600161 514 ntBASIC4.31□□□□□ -1.72
PPP4R4Q6NUP7 AC010201.1-201ENST00000605051 540 ntBASIC4.31□□□□□ -1.72
PPP4R4Q6NUP7 AP000860.1-201ENST00000605250 559 ntBASIC4.31□□□□□ -1.72
PPP4R4Q6NUP7 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC4.31□□□□□ -1.72
PPP4R4Q6NUP7 AL031666.3-201ENST00000609320 1006 ntBASIC4.31□□□□□ -1.72
PPP4R4Q6NUP7 AC015540.1-201ENST00000615828 501 ntBASIC4.31□□□□□ -1.72
PPP4R4Q6NUP7 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.31□□□□□ -1.72
PPP4R4Q6NUP7 AL136313.1-201ENST00000624804 202 ntBASIC4.31□□□□□ -1.72
PPP4R4Q6NUP7 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC4.31□□□□□ -1.72
PPP4R4Q6NUP7 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
PPP4R4Q6NUP7 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
PPP4R4Q6NUP7 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PPP4R4Q6NUP7 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PPP4R4Q6NUP7 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PPP4R4Q6NUP7 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PPP4R4Q6NUP7 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.3□□□□□ -1.72
PPP4R4Q6NUP7 AL442639.1-201ENST00000625030 1899 ntBASIC4.3□□□□□ -1.72
PPP4R4Q6NUP7 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.3□□□□□ -1.72
PPP4R4Q6NUP7 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.3□□□□□ -1.72
PPP4R4Q6NUP7 AC138915.3-201ENST00000562908 1389 ntBASIC4.3□□□□□ -1.72
PPP4R4Q6NUP7 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
PPP4R4Q6NUP7 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
PPP4R4Q6NUP7 RN7SKP115-201ENST00000363177 317 ntBASIC4.3□□□□□ -1.72
PPP4R4Q6NUP7 RNY3P13-201ENST00000365542 102 ntBASIC4.3□□□□□ -1.72
PPP4R4Q6NUP7 RPL7P60-201ENST00000397636 735 ntBASIC4.3□□□□□ -1.72
PPP4R4Q6NUP7 RN7SKP106-201ENST00000410832 272 ntBASIC4.3□□□□□ -1.72
PPP4R4Q6NUP7 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC4.3□□□□□ -1.72
PPP4R4Q6NUP7 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.3□□□□□ -1.72
PPP4R4Q6NUP7 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.3□□□□□ -1.72
PPP4R4Q6NUP7 RPL7P28-201ENST00000437739 740 ntBASIC4.3□□□□□ -1.72
PPP4R4Q6NUP7 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.3□□□□□ -1.72
PPP4R4Q6NUP7 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC4.3□□□□□ -1.72
PPP4R4Q6NUP7 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC4.3□□□□□ -1.72
PPP4R4Q6NUP7 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.3□□□□□ -1.72
PPP4R4Q6NUP7 AL049714.1-201ENST00000466686 347 ntBASIC4.3□□□□□ -1.72
PPP4R4Q6NUP7 AC106872.2-201ENST00000494303 480 ntBASIC4.3□□□□□ -1.72
PPP4R4Q6NUP7 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.3□□□□□ -1.72
PPP4R4Q6NUP7 AC091868.1-201ENST00000508746 304 ntBASIC4.3□□□□□ -1.72
PPP4R4Q6NUP7 SCARNA15.2-201ENST00000516409 127 ntBASIC4.3□□□□□ -1.72
PPP4R4Q6NUP7 AC100870.1-201ENST00000522035 505 ntBASIC4.3□□□□□ -1.72
PPP4R4Q6NUP7 AP001804.3-201ENST00000525146 880 ntBASIC4.3□□□□□ -1.72
PPP4R4Q6NUP7 AP003033.1-201ENST00000527244 415 ntBASIC4.3□□□□□ -1.72
PPP4R4Q6NUP7 AP003392.2-201ENST00000527269 208 ntBASIC4.3□□□□□ -1.72
PPP4R4Q6NUP7 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC4.3□□□□□ -1.72
PPP4R4Q6NUP7 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC4.3□□□□□ -1.72
PPP4R4Q6NUP7 EIF1P4-201ENST00000572664 335 ntBASIC4.3□□□□□ -1.72
PPP4R4Q6NUP7 MIR3682-201ENST00000581338 84 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms