Protein–RNA interactions for Protein: Q63HN8

RNF213, E3 ubiquitin-protein ligase RNF213, humanhuman

Predictions only

Length 5,207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213Q63HN8 RPL30P3-201ENST00000424262 333 ntBASIC1.03□□□□□ -2.24
RNF213Q63HN8 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC1.03□□□□□ -2.24
RNF213Q63HN8 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC1.03□□□□□ -2.24
RNF213Q63HN8 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.03□□□□□ -2.24
RNF213Q63HN8 AL356575.1-201ENST00000603008 283 ntBASIC1.03□□□□□ -2.24
RNF213Q63HN8 SNORD21-201ENST00000383953 95 ntBASIC1.03□□□□□ -2.24
RNF213Q63HN8 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.03□□□□□ -2.24
RNF213Q63HN8 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC1.03□□□□□ -2.24
RNF213Q63HN8 AC073387.2-201ENST00000604797 784 ntBASIC1.03□□□□□ -2.24
RNF213Q63HN8 HPVC1-201ENST00000629899 1198 ntBASIC1.03□□□□□ -2.24
RNF213Q63HN8 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
RNF213Q63HN8 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC1.03□□□□□ -2.24
RNF213Q63HN8 RNU2-6P-201ENST00000411404 190 ntBASIC1.03□□□□□ -2.24
RNF213Q63HN8 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC1.03□□□□□ -2.24
RNF213Q63HN8 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.03□□□□□ -2.24
RNF213Q63HN8 AC114786.4-201ENST00000508771 728 ntBASIC1.03□□□□□ -2.24
RNF213Q63HN8 AC114797.1-201ENST00000514003 728 ntBASIC1.03□□□□□ -2.24
RNF213Q63HN8 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC1.03□□□□□ -2.24
RNF213Q63HN8 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC1.03□□□□□ -2.24
RNF213Q63HN8 AL356280.1-201ENST00000603614 379 ntBASIC1.03□□□□□ -2.24
RNF213Q63HN8 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
RNF213Q63HN8 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
RNF213Q63HN8 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC1.03□□□□□ -2.24
RNF213Q63HN8 EZH2P1-201ENST00000431167 291 ntBASIC1.03□□□□□ -2.24
RNF213Q63HN8 AP001207.1-201ENST00000524051 481 ntBASIC1.03□□□□□ -2.24
RNF213Q63HN8 MIR5092-201ENST00000583139 88 ntBASIC1.03□□□□□ -2.24
RNF213Q63HN8 AC025016.1-201ENST00000616746 682 ntBASIC1.03□□□□□ -2.24
RNF213Q63HN8 MIR6132-201ENST00000622083 109 ntBASIC1.03□□□□□ -2.24
RNF213Q63HN8 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
RNF213Q63HN8 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.25
RNF213Q63HN8 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.25
RNF213Q63HN8 AC105402.2-201ENST00000438503 358 ntBASIC1.02□□□□□ -2.25
RNF213Q63HN8 AC009263.1-201ENST00000441193 1239 ntBASIC1.02□□□□□ -2.25
RNF213Q63HN8 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC1.02□□□□□ -2.25
RNF213Q63HN8 RPS15AP36-201ENST00000492022 382 ntBASIC1.02□□□□□ -2.25
RNF213Q63HN8 AC022447.3-201ENST00000506865 495 ntBASIC1.02□□□□□ -2.25
RNF213Q63HN8 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC1.02□□□□□ -2.25
RNF213Q63HN8 AC022790.1-201ENST00000522872 204 ntBASIC1.02□□□□□ -2.25
RNF213Q63HN8 AC036111.3-201ENST00000526389 112 ntBASIC1.02□□□□□ -2.25
RNF213Q63HN8 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC1.02□□□□□ -2.25
RNF213Q63HN8 RPS3AP23-202ENST00000574601 686 ntBASIC1.02□□□□□ -2.25
RNF213Q63HN8 MIR6766-201ENST00000622641 72 ntBASIC1.02□□□□□ -2.25
RNF213Q63HN8 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
RNF213Q63HN8 HMGB3P23-201ENST00000414981 585 ntBASIC1.02□□□□□ -2.25
RNF213Q63HN8 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.02□□□□□ -2.25
RNF213Q63HN8 YWHAZP7-201ENST00000436906 631 ntBASIC1.02□□□□□ -2.25
RNF213Q63HN8 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.02□□□□□ -2.25
RNF213Q63HN8 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC1.02□□□□□ -2.25
RNF213Q63HN8 EEF1B2P4-201ENST00000551398 348 ntBASIC1.02□□□□□ -2.25
RNF213Q63HN8 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC1.02□□□□□ -2.25
RNF213Q63HN8 MTATP6P3-201ENST00000581686 676 ntBASIC1.02□□□□□ -2.25
RNF213Q63HN8 AC105245.1-201ENST00000581934 244 ntBASIC1.02□□□□□ -2.25
RNF213Q63HN8 AC010678.1-201ENST00000614118 713 ntBASIC1.02□□□□□ -2.25
RNF213Q63HN8 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.02□□□□□ -2.25
RNF213Q63HN8 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC1.02□□□□□ -2.25
RNF213Q63HN8 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC1.02□□□□□ -2.25
RNF213Q63HN8 AC007342.9-201ENST00000623877 1385 ntBASIC1.02□□□□□ -2.25
RNF213Q63HN8 ARPC3P1-201ENST00000437218 533 ntBASIC1.02□□□□□ -2.25
RNF213Q63HN8 AC009969.1-201ENST00000438726 172 ntBASIC1.02□□□□□ -2.25
RNF213Q63HN8 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
RNF213Q63HN8 FABP5P5-201ENST00000515537 406 ntBASIC1.02□□□□□ -2.25
RNF213Q63HN8 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.02□□□□□ -2.25
RNF213Q63HN8 SETP7-201ENST00000552169 453 ntBASIC1.02□□□□□ -2.25
RNF213Q63HN8 MIR6788-201ENST00000618842 66 ntBASIC1.02□□□□□ -2.25
RNF213Q63HN8 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC1.02□□□□□ -2.25
RNF213Q63HN8 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC1.02□□□□□ -2.25
RNF213Q63HN8 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
RNF213Q63HN8 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
RNF213Q63HN8 Y_RNA.258-201ENST00000364613 105 ntBASIC1.02□□□□□ -2.25
RNF213Q63HN8 AC018630.2-202ENST00000422992 927 ntBASIC1.02□□□□□ -2.25
RNF213Q63HN8 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.02□□□□□ -2.25
RNF213Q63HN8 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.02□□□□□ -2.25
RNF213Q63HN8 FAM106DP-201ENST00000586416 501 ntBASIC1.02□□□□□ -2.25
RNF213Q63HN8 AC096772.1-201ENST00000609146 564 ntBASIC1.02□□□□□ -2.25
RNF213Q63HN8 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC1.02□□□□□ -2.25
RNF213Q63HN8 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
RNF213Q63HN8 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.02□□□□□ -2.25
RNF213Q63HN8 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
RNF213Q63HN8 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
RNF213Q63HN8 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
RNF213Q63HN8 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC1.02□□□□□ -2.25
RNF213Q63HN8 RPL21P3-201ENST00000395517 478 ntBASIC1.02□□□□□ -2.25
RNF213Q63HN8 USP9YP8-201ENST00000441913 500 ntBASIC1.02□□□□□ -2.25
RNF213Q63HN8 AC011979.1-201ENST00000472300 483 ntBASIC1.02□□□□□ -2.25
RNF213Q63HN8 AP000852.1-201ENST00000472460 573 ntBASIC1.02□□□□□ -2.25
RNF213Q63HN8 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.02□□□□□ -2.25
RNF213Q63HN8 AL161670.1-201ENST00000554348 137 ntBASIC1.02□□□□□ -2.25
RNF213Q63HN8 AL158196.1-201ENST00000616786 434 ntBASIC1.02□□□□□ -2.25
RNF213Q63HN8 AC009237.17-201ENST00000618111 748 ntBASIC1.02□□□□□ -2.25
RNF213Q63HN8 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC1.01□□□□□ -2.25
RNF213Q63HN8 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC1.01□□□□□ -2.25
RNF213Q63HN8 AC123912.3-201ENST00000600907 1367 ntBASIC1.01□□□□□ -2.25
RNF213Q63HN8 RNA5SP210-201ENST00000391034 120 ntBASIC1.01□□□□□ -2.25
RNF213Q63HN8 RPL31P1-201ENST00000398116 372 ntBASIC1.01□□□□□ -2.25
RNF213Q63HN8 AL136133.1-201ENST00000413694 376 ntBASIC1.01□□□□□ -2.25
RNF213Q63HN8 RPL31P35-201ENST00000431058 377 ntBASIC1.01□□□□□ -2.25
RNF213Q63HN8 AL365400.1-201ENST00000431854 640 ntBASIC1.01□□□□□ -2.25
RNF213Q63HN8 AL138799.3-201ENST00000438968 350 ntBASIC1.01□□□□□ -2.25
RNF213Q63HN8 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC1.01□□□□□ -2.25
RNF213Q63HN8 AC092451.2-201ENST00000538746 658 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms