Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
VPS13DQ5THJ4 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.27□□□□□ -2.21
VPS13DQ5THJ4 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.27□□□□□ -2.21
VPS13DQ5THJ4 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
VPS13DQ5THJ4 SNORA48.3-201ENST00000391081 134 ntBASIC1.27□□□□□ -2.21
VPS13DQ5THJ4 FGF7P8-201ENST00000402994 292 ntBASIC1.27□□□□□ -2.21
VPS13DQ5THJ4 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC1.27□□□□□ -2.21
VPS13DQ5THJ4 TVP23BP2-201ENST00000455082 615 ntBASIC1.27□□□□□ -2.21
VPS13DQ5THJ4 MTND4LP22-201ENST00000508209 276 ntBASIC1.27□□□□□ -2.21
VPS13DQ5THJ4 AC016877.3-201ENST00000606778 504 ntBASIC1.27□□□□□ -2.21
VPS13DQ5THJ4 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC1.27□□□□□ -2.21
VPS13DQ5THJ4 AC244517.12-201ENST00000623581 663 ntBASIC1.27□□□□□ -2.21
VPS13DQ5THJ4 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC1.27□□□□□ -2.21
VPS13DQ5THJ4 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC1.27□□□□□ -2.21
VPS13DQ5THJ4 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.27□□□□□ -2.21
VPS13DQ5THJ4 RNU6-53P-201ENST00000365367 106 ntBASIC1.27□□□□□ -2.21
VPS13DQ5THJ4 RNA5SP338-201ENST00000410495 85 ntBASIC1.27□□□□□ -2.21
VPS13DQ5THJ4 RPS3AP9-201ENST00000417027 792 ntBASIC1.27□□□□□ -2.21
VPS13DQ5THJ4 AC011753.1-201ENST00000451001 220 ntBASIC1.27□□□□□ -2.21
VPS13DQ5THJ4 SSXP1-201ENST00000453640 473 ntBASIC1.27□□□□□ -2.21
VPS13DQ5THJ4 RPL7P5-201ENST00000471472 736 ntBASIC1.27□□□□□ -2.21
VPS13DQ5THJ4 RN7SKP49-201ENST00000516675 260 ntBASIC1.27□□□□□ -2.21
VPS13DQ5THJ4 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC1.27□□□□□ -2.21
VPS13DQ5THJ4 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC1.27□□□□□ -2.21
VPS13DQ5THJ4 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC1.27□□□□□ -2.21
VPS13DQ5THJ4 AC007620.3-201ENST00000608131 497 ntBASIC1.27□□□□□ -2.21
VPS13DQ5THJ4 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC1.27□□□□□ -2.21
VPS13DQ5THJ4 AC138649.5-201ENST00000637456 137 ntBASIC1.27□□□□□ -2.21
VPS13DQ5THJ4 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
VPS13DQ5THJ4 AC013404.1-201ENST00000413068 249 ntBASIC1.26□□□□□ -2.21
VPS13DQ5THJ4 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC1.26□□□□□ -2.21
VPS13DQ5THJ4 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC1.26□□□□□ -2.21
VPS13DQ5THJ4 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC1.26□□□□□ -2.21
VPS13DQ5THJ4 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.26□□□□□ -2.21
VPS13DQ5THJ4 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.26□□□□□ -2.21
VPS13DQ5THJ4 U6.98-201ENST00000637157 84 ntBASIC1.26□□□□□ -2.21
VPS13DQ5THJ4 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC1.26□□□□□ -2.21
VPS13DQ5THJ4 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
VPS13DQ5THJ4 AC068700.1-201ENST00000565862 3754 ntBASIC1.26□□□□□ -2.21
VPS13DQ5THJ4 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
VPS13DQ5THJ4 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.26□□□□□ -2.21
VPS13DQ5THJ4 AL627390.1-201ENST00000396055 340 ntBASIC1.26□□□□□ -2.21
VPS13DQ5THJ4 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC1.26□□□□□ -2.21
VPS13DQ5THJ4 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC1.26□□□□□ -2.21
VPS13DQ5THJ4 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC1.26□□□□□ -2.21
VPS13DQ5THJ4 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC1.26□□□□□ -2.21
VPS13DQ5THJ4 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC1.26□□□□□ -2.21
VPS13DQ5THJ4 AP000553.5-201ENST00000641933 54 ntBASIC1.26□□□□□ -2.21
VPS13DQ5THJ4 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.26□□□□□ -2.21
VPS13DQ5THJ4 AL118496.1-201ENST00000440201 1812 ntBASIC1.26□□□□□ -2.21
VPS13DQ5THJ4 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
VPS13DQ5THJ4 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.26□□□□□ -2.21
VPS13DQ5THJ4 U8.10-201ENST00000384260 133 ntBASIC1.26□□□□□ -2.21
VPS13DQ5THJ4 RNU2-20P-201ENST00000410425 191 ntBASIC1.26□□□□□ -2.21
VPS13DQ5THJ4 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC1.26□□□□□ -2.21
VPS13DQ5THJ4 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC1.26□□□□□ -2.21
VPS13DQ5THJ4 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.26□□□□□ -2.21
VPS13DQ5THJ4 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC1.26□□□□□ -2.21
VPS13DQ5THJ4 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.26□□□□□ -2.21
VPS13DQ5THJ4 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.26□□□□□ -2.21
VPS13DQ5THJ4 REXO2-218ENST00000544827 880 ntTSL 3 BASIC1.26□□□□□ -2.21
VPS13DQ5THJ4 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC1.26□□□□□ -2.21
VPS13DQ5THJ4 AC108479.2-201ENST00000617314 601 ntBASIC1.26□□□□□ -2.21
VPS13DQ5THJ4 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
VPS13DQ5THJ4 RNU1-57P-201ENST00000384491 166 ntBASIC1.25□□□□□ -2.21
VPS13DQ5THJ4 HIGD1AP11-201ENST00000438361 280 ntBASIC1.25□□□□□ -2.21
VPS13DQ5THJ4 LTV1P1-201ENST00000510683 1237 ntBASIC1.25□□□□□ -2.21
VPS13DQ5THJ4 RNU6-826P-201ENST00000516827 104 ntBASIC1.25□□□□□ -2.21
VPS13DQ5THJ4 IGLV3-17-201ENST00000519099 244 ntBASIC1.25□□□□□ -2.21
VPS13DQ5THJ4 RPAP2P1-201ENST00000603626 1168 ntBASIC1.25□□□□□ -2.21
VPS13DQ5THJ4 FO624990.1-201ENST00000636373 85 ntBASIC1.25□□□□□ -2.21
VPS13DQ5THJ4 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.25□□□□□ -2.21
VPS13DQ5THJ4 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC1.25□□□□□ -2.21
VPS13DQ5THJ4 AC010329.2-201ENST00000595195 2737 ntBASIC1.25□□□□□ -2.21
VPS13DQ5THJ4 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC1.25□□□□□ -2.21
VPS13DQ5THJ4 RSL24D1P2-201ENST00000445584 366 ntBASIC1.25□□□□□ -2.21
VPS13DQ5THJ4 C1GALT1P2-201ENST00000510813 1104 ntBASIC1.25□□□□□ -2.21
VPS13DQ5THJ4 AC107393.1-201ENST00000512403 346 ntBASIC1.25□□□□□ -2.21
VPS13DQ5THJ4 AC025281.1-201ENST00000567026 265 ntBASIC1.25□□□□□ -2.21
VPS13DQ5THJ4 AC106730.3-201ENST00000624568 641 ntBASIC1.25□□□□□ -2.21
VPS13DQ5THJ4 AC092159.4-201ENST00000624944 550 ntBASIC1.25□□□□□ -2.21
VPS13DQ5THJ4 AL121594.5-201ENST00000631724 573 ntBASIC1.25□□□□□ -2.21
VPS13DQ5THJ4 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
VPS13DQ5THJ4 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
VPS13DQ5THJ4 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
VPS13DQ5THJ4 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC1.25□□□□□ -2.21
VPS13DQ5THJ4 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.25□□□□□ -2.21
VPS13DQ5THJ4 AL353093.1-201ENST00000441292 436 ntBASIC1.25□□□□□ -2.21
VPS13DQ5THJ4 RPS26P21-201ENST00000475397 348 ntBASIC1.25□□□□□ -2.21
VPS13DQ5THJ4 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC1.25□□□□□ -2.21
VPS13DQ5THJ4 LRRC37A5P-203ENST00000580181 585 ntBASIC1.25□□□□□ -2.21
VPS13DQ5THJ4 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC1.25□□□□□ -2.21
VPS13DQ5THJ4 AC073348.1-201ENST00000623002 331 ntBASIC1.25□□□□□ -2.21
VPS13DQ5THJ4 AK9-203ENST00000368948 2478 ntTSL 5 BASIC1.25□□□□□ -2.21
VPS13DQ5THJ4 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
VPS13DQ5THJ4 RNY1P10-201ENST00000363268 113 ntBASIC1.24□□□□□ -2.21
VPS13DQ5THJ4 RNU4-74P-201ENST00000411280 161 ntBASIC1.24□□□□□ -2.21
VPS13DQ5THJ4 AL138785.1-201ENST00000425821 331 ntBASIC1.24□□□□□ -2.21
VPS13DQ5THJ4 RPL21P2-201ENST00000440049 481 ntBASIC1.24□□□□□ -2.21
VPS13DQ5THJ4 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms