Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 AP003181.2-201ENST00000528941 181 ntBASIC4.42□□□□□ -1.7
SLC44A4Q53GD3 AC100770.1-201ENST00000532310 322 ntBASIC4.42□□□□□ -1.7
SLC44A4Q53GD3 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC4.42□□□□□ -1.7
SLC44A4Q53GD3 ADI1P3-201ENST00000549509 470 ntBASIC4.42□□□□□ -1.7
SLC44A4Q53GD3 AL121579.1-201ENST00000555129 305 ntBASIC4.42□□□□□ -1.7
SLC44A4Q53GD3 ZNF519P2-201ENST00000557032 169 ntBASIC4.42□□□□□ -1.7
SLC44A4Q53GD3 AC107954.1-201ENST00000565906 727 ntBASIC4.42□□□□□ -1.7
SLC44A4Q53GD3 RN7SL703P-201ENST00000578485 302 ntBASIC4.42□□□□□ -1.7
SLC44A4Q53GD3 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SLC44A4Q53GD3 AC012417.1-201ENST00000582307 1039 ntBASIC4.42□□□□□ -1.7
SLC44A4Q53GD3 AL354984.3-201ENST00000604803 325 ntBASIC4.42□□□□□ -1.7
SLC44A4Q53GD3 AL391813.2-201ENST00000609113 322 ntBASIC4.42□□□□□ -1.7
SLC44A4Q53GD3 AC091834.1-201ENST00000614543 472 ntBASIC4.42□□□□□ -1.7
SLC44A4Q53GD3 AP001506.1-201ENST00000615444 211 ntBASIC4.42□□□□□ -1.7
SLC44A4Q53GD3 AC108479.2-201ENST00000617314 601 ntBASIC4.42□□□□□ -1.7
SLC44A4Q53GD3 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
SLC44A4Q53GD3 AC079597.1-201ENST00000624306 508 ntBASIC4.42□□□□□ -1.7
SLC44A4Q53GD3 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
SLC44A4Q53GD3 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.42□□□□□ -1.7
SLC44A4Q53GD3 NMD3P1-201ENST00000439704 1488 ntBASIC4.42□□□□□ -1.7
SLC44A4Q53GD3 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.42□□□□□ -1.7
SLC44A4Q53GD3 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.42□□□□□ -1.7
SLC44A4Q53GD3 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SLC44A4Q53GD3 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.41□□□□□ -1.7
SLC44A4Q53GD3 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SLC44A4Q53GD3 MIR208A-201ENST00000362287 71 ntBASIC4.41□□□□□ -1.7
SLC44A4Q53GD3 SNORA71.3-201ENST00000362582 128 ntBASIC4.41□□□□□ -1.7
SLC44A4Q53GD3 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
SLC44A4Q53GD3 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.41□□□□□ -1.7
SLC44A4Q53GD3 AC092447.6-201ENST00000414578 210 ntBASIC4.41□□□□□ -1.7
SLC44A4Q53GD3 SPA17P1-201ENST00000416656 452 ntBASIC4.41□□□□□ -1.7
SLC44A4Q53GD3 ZNF863P-201ENST00000426746 417 ntBASIC4.41□□□□□ -1.7
SLC44A4Q53GD3 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.41□□□□□ -1.7
SLC44A4Q53GD3 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC4.41□□□□□ -1.7
SLC44A4Q53GD3 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.41□□□□□ -1.7
SLC44A4Q53GD3 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.41□□□□□ -1.7
SLC44A4Q53GD3 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC4.41□□□□□ -1.7
SLC44A4Q53GD3 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC4.41□□□□□ -1.7
SLC44A4Q53GD3 RPL35AP15-201ENST00000468042 339 ntBASIC4.41□□□□□ -1.7
SLC44A4Q53GD3 RPL31P58-201ENST00000469001 379 ntBASIC4.41□□□□□ -1.7
SLC44A4Q53GD3 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC4.41□□□□□ -1.7
SLC44A4Q53GD3 AC092989.1-201ENST00000481235 277 ntBASIC4.41□□□□□ -1.7
SLC44A4Q53GD3 MTND1P3-201ENST00000484956 952 ntBASIC4.41□□□□□ -1.7
SLC44A4Q53GD3 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.41□□□□□ -1.7
SLC44A4Q53GD3 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SLC44A4Q53GD3 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC4.41□□□□□ -1.7
SLC44A4Q53GD3 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.41□□□□□ -1.7
SLC44A4Q53GD3 AC006390.1-201ENST00000508068 283 ntBASIC4.41□□□□□ -1.7
SLC44A4Q53GD3 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.41□□□□□ -1.7
SLC44A4Q53GD3 AP003467.2-201ENST00000520175 319 ntBASIC4.41□□□□□ -1.7
SLC44A4Q53GD3 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC4.41□□□□□ -1.7
SLC44A4Q53GD3 AC123904.2-201ENST00000548059 300 ntBASIC4.41□□□□□ -1.7
SLC44A4Q53GD3 AC124947.2-202ENST00000552735 133 ntBASIC4.41□□□□□ -1.7
SLC44A4Q53GD3 CENPUP2-201ENST00000555897 1186 ntBASIC4.41□□□□□ -1.7
SLC44A4Q53GD3 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.41□□□□□ -1.7
SLC44A4Q53GD3 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.41□□□□□ -1.7
SLC44A4Q53GD3 AC090578.1-201ENST00000604955 591 ntBASIC4.41□□□□□ -1.7
SLC44A4Q53GD3 AC004825.2-201ENST00000616634 455 ntBASIC4.41□□□□□ -1.7
SLC44A4Q53GD3 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.41□□□□□ -1.7
SLC44A4Q53GD3 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC4.41□□□□□ -1.7
SLC44A4Q53GD3 AC092794.2-201ENST00000620933 563 ntBASIC4.41□□□□□ -1.7
SLC44A4Q53GD3 AC103858.2-201ENST00000621471 543 ntBASIC4.41□□□□□ -1.7
SLC44A4Q53GD3 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.41□□□□□ -1.7
SLC44A4Q53GD3 AC110994.2-201ENST00000635481 492 ntBASIC4.41□□□□□ -1.7
SLC44A4Q53GD3 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SLC44A4Q53GD3 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.4□□□□□ -1.7
SLC44A4Q53GD3 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
SLC44A4Q53GD3 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
SLC44A4Q53GD3 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
SLC44A4Q53GD3 AC090229.1-201ENST00000590983 1609 ntBASIC4.4□□□□□ -1.7
SLC44A4Q53GD3 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.4□□□□□ -1.7
SLC44A4Q53GD3 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
SLC44A4Q53GD3 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC4.4□□□□□ -1.71
SLC44A4Q53GD3 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SLC44A4Q53GD3 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
SLC44A4Q53GD3 RNA5SP387-201ENST00000364226 106 ntBASIC4.4□□□□□ -1.71
SLC44A4Q53GD3 RNU4-12P-201ENST00000365233 139 ntBASIC4.4□□□□□ -1.71
SLC44A4Q53GD3 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC4.4□□□□□ -1.71
SLC44A4Q53GD3 RNU5A-6P-201ENST00000384136 116 ntBASIC4.4□□□□□ -1.71
SLC44A4Q53GD3 SNORD51-201ENST00000384320 80 ntBASIC4.4□□□□□ -1.71
SLC44A4Q53GD3 SNORD115.1-201ENST00000391109 76 ntBASIC4.4□□□□□ -1.71
SLC44A4Q53GD3 ERMN-204ENST00000409925 556 ntTSL 4 BASIC4.4□□□□□ -1.71
SLC44A4Q53GD3 USP9YP6-201ENST00000413550 854 ntBASIC4.4□□□□□ -1.71
SLC44A4Q53GD3 MTCYBP24-201ENST00000420387 1106 ntBASIC4.4□□□□□ -1.71
SLC44A4Q53GD3 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SLC44A4Q53GD3 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.4□□□□□ -1.71
SLC44A4Q53GD3 EZH2P1-201ENST00000431167 291 ntBASIC4.4□□□□□ -1.71
SLC44A4Q53GD3 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.4□□□□□ -1.71
SLC44A4Q53GD3 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC4.4□□□□□ -1.71
SLC44A4Q53GD3 AL662791.1-201ENST00000441992 928 ntBASIC4.4□□□□□ -1.71
SLC44A4Q53GD3 RPL17P49-201ENST00000443728 411 ntBASIC4.4□□□□□ -1.71
SLC44A4Q53GD3 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.4□□□□□ -1.71
SLC44A4Q53GD3 GAPDHP17-201ENST00000449858 1001 ntBASIC4.4□□□□□ -1.71
SLC44A4Q53GD3 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC4.4□□□□□ -1.71
SLC44A4Q53GD3 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.4□□□□□ -1.71
SLC44A4Q53GD3 AC104308.1-201ENST00000454621 333 ntBASIC4.4□□□□□ -1.71
SLC44A4Q53GD3 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC4.4□□□□□ -1.71
SLC44A4Q53GD3 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC4.4□□□□□ -1.71
SLC44A4Q53GD3 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.4□□□□□ -1.71
SLC44A4Q53GD3 RPL23AP65-201ENST00000475608 468 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 138 ms