Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.55□□□□□ -1.84
PTCH1Q13635 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.55□□□□□ -1.84
PTCH1Q13635 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.55□□□□□ -1.84
PTCH1Q13635 MTND2P31-201ENST00000512602 616 ntBASIC3.55□□□□□ -1.84
PTCH1Q13635 RNA5SP76-201ENST00000516277 87 ntBASIC3.55□□□□□ -1.84
PTCH1Q13635 AP004371.1-201ENST00000525240 214 ntBASIC3.55□□□□□ -1.84
PTCH1Q13635 OR4A45P-201ENST00000529954 901 ntBASIC3.55□□□□□ -1.84
PTCH1Q13635 AC109635.4-202ENST00000531666 412 ntBASIC3.55□□□□□ -1.84
PTCH1Q13635 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.55□□□□□ -1.84
PTCH1Q13635 MIR3908-201ENST00000579798 126 ntBASIC3.55□□□□□ -1.84
PTCH1Q13635 AC012119.1-201ENST00000603184 222 ntBASIC3.55□□□□□ -1.84
PTCH1Q13635 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
PTCH1Q13635 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.55□□□□□ -1.84
PTCH1Q13635 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
PTCH1Q13635 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PTCH1Q13635 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.55□□□□□ -1.84
PTCH1Q13635 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
PTCH1Q13635 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
PTCH1Q13635 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
PTCH1Q13635 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PTCH1Q13635 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PTCH1Q13635 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PTCH1Q13635 RNU1-100P-201ENST00000365255 165 ntBASIC3.54□□□□□ -1.84
PTCH1Q13635 AC107081.1-201ENST00000414975 361 ntBASIC3.54□□□□□ -1.84
PTCH1Q13635 DPH3P2-201ENST00000422618 250 ntBASIC3.54□□□□□ -1.84
PTCH1Q13635 AC012497.1-201ENST00000429392 575 ntBASIC3.54□□□□□ -1.84
PTCH1Q13635 AL512661.1-201ENST00000434586 1253 ntBASIC3.54□□□□□ -1.84
PTCH1Q13635 AC009969.1-201ENST00000438726 172 ntBASIC3.54□□□□□ -1.84
PTCH1Q13635 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.54□□□□□ -1.84
PTCH1Q13635 RPS12P2-201ENST00000439728 269 ntBASIC3.54□□□□□ -1.84
PTCH1Q13635 AC011816.1-201ENST00000441346 546 ntBASIC3.54□□□□□ -1.84
PTCH1Q13635 HSFY3P-201ENST00000444242 1191 ntBASIC3.54□□□□□ -1.84
PTCH1Q13635 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.54□□□□□ -1.84
PTCH1Q13635 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PTCH1Q13635 CKS1BP2-201ENST00000497342 240 ntBASIC3.54□□□□□ -1.84
PTCH1Q13635 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PTCH1Q13635 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PTCH1Q13635 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PTCH1Q13635 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PTCH1Q13635 RNU6-416P-201ENST00000516265 103 ntBASIC3.54□□□□□ -1.84
PTCH1Q13635 RNU6-1073P-201ENST00000517182 106 ntBASIC3.54□□□□□ -1.84
PTCH1Q13635 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC3.54□□□□□ -1.84
PTCH1Q13635 AP001207.1-201ENST00000524051 481 ntBASIC3.54□□□□□ -1.84
PTCH1Q13635 AP003385.6-201ENST00000531603 374 ntBASIC3.54□□□□□ -1.84
PTCH1Q13635 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
PTCH1Q13635 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC3.54□□□□□ -1.84
PTCH1Q13635 AL355812.1-201ENST00000603215 216 ntBASIC3.54□□□□□ -1.84
PTCH1Q13635 DPRXP5-201ENST00000604662 539 ntBASIC3.54□□□□□ -1.84
PTCH1Q13635 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.54□□□□□ -1.84
PTCH1Q13635 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC3.54□□□□□ -1.84
PTCH1Q13635 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC3.54□□□□□ -1.84
PTCH1Q13635 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.54□□□□□ -1.84
PTCH1Q13635 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
PTCH1Q13635 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PTCH1Q13635 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PTCH1Q13635 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PTCH1Q13635 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PTCH1Q13635 AC138915.3-201ENST00000562908 1389 ntBASIC3.53□□□□□ -1.84
PTCH1Q13635 RNU6-481P-201ENST00000384194 107 ntBASIC3.53□□□□□ -1.84
PTCH1Q13635 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PTCH1Q13635 AL079342.1-201ENST00000401460 267 ntBASIC3.53□□□□□ -1.84
PTCH1Q13635 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.53□□□□□ -1.84
PTCH1Q13635 HIGD1AP2-201ENST00000446367 280 ntBASIC3.53□□□□□ -1.84
PTCH1Q13635 AL096803.2-201ENST00000450032 677 ntBASIC3.53□□□□□ -1.84
PTCH1Q13635 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.53□□□□□ -1.84
PTCH1Q13635 POU5F1P7-201ENST00000508759 541 ntBASIC3.53□□□□□ -1.84
PTCH1Q13635 COL6A4P2-205ENST00000509855 506 ntBASIC3.53□□□□□ -1.84
PTCH1Q13635 PRELID3BP4-201ENST00000515476 571 ntBASIC3.53□□□□□ -1.84
PTCH1Q13635 IGLVIV-66-1-201ENST00000521832 460 ntBASIC3.53□□□□□ -1.84
PTCH1Q13635 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.53□□□□□ -1.84
PTCH1Q13635 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
PTCH1Q13635 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC3.53□□□□□ -1.84
PTCH1Q13635 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
PTCH1Q13635 AL845331.3-202ENST00000562856 261 ntBASIC3.53□□□□□ -1.84
PTCH1Q13635 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC3.53□□□□□ -1.84
PTCH1Q13635 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.53□□□□□ -1.84
PTCH1Q13635 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.53□□□□□ -1.84
PTCH1Q13635 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC3.53□□□□□ -1.84
PTCH1Q13635 AC011468.4-201ENST00000603942 409 ntBASIC3.53□□□□□ -1.84
PTCH1Q13635 AC013468.1-201ENST00000608680 598 ntBASIC3.53□□□□□ -1.84
PTCH1Q13635 AP004247.3-201ENST00000608682 624 ntBASIC3.53□□□□□ -1.84
PTCH1Q13635 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.53□□□□□ -1.84
PTCH1Q13635 AC097460.3-201ENST00000623099 442 ntBASIC3.53□□□□□ -1.84
PTCH1Q13635 AC092184.1-201ENST00000625042 715 ntBASIC3.53□□□□□ -1.84
PTCH1Q13635 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.53□□□□□ -1.84
PTCH1Q13635 MTND5P31-201ENST00000419366 1374 ntBASIC3.53□□□□□ -1.84
PTCH1Q13635 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.85
PTCH1Q13635 RNU6-76P-201ENST00000384060 104 ntBASIC3.53□□□□□ -1.85
PTCH1Q13635 RNU6-328P-201ENST00000390887 106 ntBASIC3.53□□□□□ -1.85
PTCH1Q13635 RNU4-78P-201ENST00000410940 126 ntBASIC3.53□□□□□ -1.85
PTCH1Q13635 AL137014.1-201ENST00000420490 1226 ntBASIC3.53□□□□□ -1.85
PTCH1Q13635 AC246680.2-201ENST00000422106 389 ntBASIC3.53□□□□□ -1.85
PTCH1Q13635 RPP40P1-201ENST00000426762 456 ntBASIC3.53□□□□□ -1.85
PTCH1Q13635 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.53□□□□□ -1.85
PTCH1Q13635 GTF2IP12-201ENST00000456547 356 ntBASIC3.53□□□□□ -1.85
PTCH1Q13635 AC132942.1-201ENST00000486753 483 ntBASIC3.53□□□□□ -1.85
PTCH1Q13635 RPL36AP51-201ENST00000487216 318 ntBASIC3.53□□□□□ -1.85
PTCH1Q13635 AC092185.1-201ENST00000491371 97 ntBASIC3.53□□□□□ -1.85
PTCH1Q13635 MTND3P24-201ENST00000506306 329 ntBASIC3.53□□□□□ -1.85
PTCH1Q13635 MTCO2P32-201ENST00000514865 403 ntBASIC3.53□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms