Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC5.04□□□□□ -1.6
SSRP1Q08945 CASC19-280ENST00000642102 1351 ntBASIC5.04□□□□□ -1.6
SSRP1Q08945 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC5.04□□□□□ -1.6
SSRP1Q08945 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
SSRP1Q08945 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.04□□□□□ -1.6
SSRP1Q08945 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SSRP1Q08945 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
SSRP1Q08945 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC5.04□□□□□ -1.6
SSRP1Q08945 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SSRP1Q08945 RNU1-15P-201ENST00000353977 144 ntBASIC5.04□□□□□ -1.6
SSRP1Q08945 SNORD56.2-201ENST00000363242 71 ntBASIC5.04□□□□□ -1.6
SSRP1Q08945 SNORA72.1-201ENST00000363485 129 ntBASIC5.04□□□□□ -1.6
SSRP1Q08945 RNA5SP447-201ENST00000363749 119 ntBASIC5.04□□□□□ -1.6
SSRP1Q08945 RNU6-637P-201ENST00000384050 107 ntBASIC5.04□□□□□ -1.6
SSRP1Q08945 MIR1-2-201ENST00000384961 85 ntBASIC5.04□□□□□ -1.6
SSRP1Q08945 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
SSRP1Q08945 SNORD66.1-201ENST00000391230 76 ntBASIC5.04□□□□□ -1.6
SSRP1Q08945 RNU6-876P-201ENST00000391295 104 ntBASIC5.04□□□□□ -1.6
SSRP1Q08945 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SSRP1Q08945 RNU6-908P-201ENST00000410160 94 ntBASIC5.04□□□□□ -1.6
SSRP1Q08945 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.04□□□□□ -1.6
SSRP1Q08945 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC5.04□□□□□ -1.6
SSRP1Q08945 MAP1LC3BP1-201ENST00000417653 379 ntBASIC5.04□□□□□ -1.6
SSRP1Q08945 AL137014.1-201ENST00000420490 1226 ntBASIC5.04□□□□□ -1.6
SSRP1Q08945 RPL23AP38-201ENST00000423801 469 ntBASIC5.04□□□□□ -1.6
SSRP1Q08945 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC5.04□□□□□ -1.6
SSRP1Q08945 CALM1P1-201ENST00000442082 433 ntBASIC5.04□□□□□ -1.6
SSRP1Q08945 MTND5P20-201ENST00000448677 143 ntBASIC5.04□□□□□ -1.6
SSRP1Q08945 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC5.04□□□□□ -1.6
SSRP1Q08945 AC234775.1-201ENST00000454247 670 ntBASIC5.04□□□□□ -1.6
SSRP1Q08945 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SSRP1Q08945 AC068305.1-201ENST00000497406 726 ntBASIC5.04□□□□□ -1.6
SSRP1Q08945 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC5.04□□□□□ -1.6
SSRP1Q08945 AC008549.1-201ENST00000512900 643 ntBASIC5.04□□□□□ -1.6
SSRP1Q08945 RNU4-60P-201ENST00000517239 135 ntBASIC5.04□□□□□ -1.6
SSRP1Q08945 IGLV3-26-201ENST00000520756 302 ntBASIC5.04□□□□□ -1.6
SSRP1Q08945 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.04□□□□□ -1.6
SSRP1Q08945 HMGN1P28-201ENST00000521340 364 ntBASIC5.04□□□□□ -1.6
SSRP1Q08945 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC5.04□□□□□ -1.6
SSRP1Q08945 PHBP17-201ENST00000528576 541 ntBASIC5.04□□□□□ -1.6
SSRP1Q08945 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC5.04□□□□□ -1.6
SSRP1Q08945 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC5.04□□□□□ -1.6
SSRP1Q08945 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC5.04□□□□□ -1.6
SSRP1Q08945 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC5.04□□□□□ -1.6
SSRP1Q08945 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC5.04□□□□□ -1.6
SSRP1Q08945 MIR4330-201ENST00000579077 105 ntBASIC5.04□□□□□ -1.6
SSRP1Q08945 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC5.04□□□□□ -1.6
SSRP1Q08945 AC060780.3-201ENST00000589464 80 ntBASIC5.04□□□□□ -1.6
SSRP1Q08945 MIR3662-201ENST00000637030 95 ntBASIC5.04□□□□□ -1.6
SSRP1Q08945 AP001273.1-201ENST00000624493 3152 ntBASIC5.04□□□□□ -1.6
SSRP1Q08945 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
SSRP1Q08945 ZNF680P1-201ENST00000436625 1469 ntBASIC5.04□□□□□ -1.6
SSRP1Q08945 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
SSRP1Q08945 AC010300.1-201ENST00000600671 5134 ntBASIC5.04□□□□□ -1.6
SSRP1Q08945 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
SSRP1Q08945 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.03□□□□□ -1.6
SSRP1Q08945 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
SSRP1Q08945 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SSRP1Q08945 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
SSRP1Q08945 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.03□□□□□ -1.6
SSRP1Q08945 AC139713.2-214ENST00000642059 1811 ntBASIC5.03□□□□□ -1.6
SSRP1Q08945 Y_RNA.38-201ENST00000362617 102 ntBASIC5.03□□□□□ -1.6
SSRP1Q08945 RNU6-1249P-201ENST00000363237 111 ntBASIC5.03□□□□□ -1.6
SSRP1Q08945 RNU6-74P-201ENST00000384235 107 ntBASIC5.03□□□□□ -1.6
SSRP1Q08945 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
SSRP1Q08945 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC5.03□□□□□ -1.6
SSRP1Q08945 SNRPEP10-201ENST00000420249 274 ntBASIC5.03□□□□□ -1.6
SSRP1Q08945 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC5.03□□□□□ -1.6
SSRP1Q08945 BEND7P1-201ENST00000422058 457 ntBASIC5.03□□□□□ -1.6
SSRP1Q08945 AC245028.1-201ENST00000423259 256 ntBASIC5.03□□□□□ -1.6
SSRP1Q08945 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC5.03□□□□□ -1.6
SSRP1Q08945 AC068287.1-201ENST00000430283 295 ntBASIC5.03□□□□□ -1.6
SSRP1Q08945 AL606489.2-201ENST00000433886 234 ntBASIC5.03□□□□□ -1.6
SSRP1Q08945 AL121601.2-201ENST00000438019 707 ntBASIC5.03□□□□□ -1.6
SSRP1Q08945 SEPT14P3-201ENST00000439401 183 ntBASIC5.03□□□□□ -1.6
SSRP1Q08945 BNIP3P2-201ENST00000441221 577 ntBASIC5.03□□□□□ -1.6
SSRP1Q08945 AL732372.2-207ENST00000445840 183 ntBASIC5.03□□□□□ -1.6
SSRP1Q08945 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC5.03□□□□□ -1.6
SSRP1Q08945 SEPT14P2-201ENST00000453405 183 ntBASIC5.03□□□□□ -1.6
SSRP1Q08945 AC007967.1-201ENST00000455422 1159 ntBASIC5.03□□□□□ -1.6
SSRP1Q08945 RNU6-261P-201ENST00000459506 102 ntBASIC5.03□□□□□ -1.6
SSRP1Q08945 RN7SL98P-201ENST00000462271 300 ntBASIC5.03□□□□□ -1.6
SSRP1Q08945 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC5.03□□□□□ -1.6
SSRP1Q08945 RN7SL810P-201ENST00000493031 276 ntBASIC5.03□□□□□ -1.6
SSRP1Q08945 AC135721.1-201ENST00000497954 479 ntBASIC5.03□□□□□ -1.6
SSRP1Q08945 AC117522.1-201ENST00000509821 380 ntBASIC5.03□□□□□ -1.6
SSRP1Q08945 SEPT14P4-201ENST00000513445 186 ntBASIC5.03□□□□□ -1.6
SSRP1Q08945 AC114797.1-201ENST00000514003 728 ntBASIC5.03□□□□□ -1.6
SSRP1Q08945 Y_RNA.702-201ENST00000516843 96 ntBASIC5.03□□□□□ -1.6
SSRP1Q08945 SNORA20.3-201ENST00000516880 132 ntBASIC5.03□□□□□ -1.6
SSRP1Q08945 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.03□□□□□ -1.6
SSRP1Q08945 FO082796.1-201ENST00000523795 183 ntBASIC5.03□□□□□ -1.6
SSRP1Q08945 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC5.03□□□□□ -1.6
SSRP1Q08945 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC5.03□□□□□ -1.6
SSRP1Q08945 AC034105.3-201ENST00000565294 442 ntBASIC5.03□□□□□ -1.6
SSRP1Q08945 AL354984.3-201ENST00000604803 325 ntBASIC5.03□□□□□ -1.6
SSRP1Q08945 AL049634.3-201ENST00000604968 457 ntBASIC5.03□□□□□ -1.6
SSRP1Q08945 AC093838.1-201ENST00000613014 469 ntBASIC5.03□□□□□ -1.6
SSRP1Q08945 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC5.03□□□□□ -1.6
SSRP1Q08945 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms