Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AC000374.1-201ENST00000434698 1745 ntBASIC5.2□□□□□ -1.58
PCDH1Q08174 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
PCDH1Q08174 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
PCDH1Q08174 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.2□□□□□ -1.58
PCDH1Q08174 AC074029.4-201ENST00000624796 1859 ntBASIC5.2□□□□□ -1.58
PCDH1Q08174 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.19□□□□□ -1.58
PCDH1Q08174 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
PCDH1Q08174 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.19□□□□□ -1.58
PCDH1Q08174 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.19□□□□□ -1.58
PCDH1Q08174 AC104260.2-201ENST00000623551 3497 ntBASIC5.19□□□□□ -1.58
PCDH1Q08174 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PCDH1Q08174 RNU6-238P-201ENST00000363313 106 ntBASIC5.19□□□□□ -1.58
PCDH1Q08174 RNA5SP234-201ENST00000363916 119 ntBASIC5.19□□□□□ -1.58
PCDH1Q08174 RNU1-146P-201ENST00000364015 165 ntBASIC5.19□□□□□ -1.58
PCDH1Q08174 RNU1-115P-201ENST00000365329 160 ntBASIC5.19□□□□□ -1.58
PCDH1Q08174 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PCDH1Q08174 Y_RNA.428-201ENST00000384078 102 ntBASIC5.19□□□□□ -1.58
PCDH1Q08174 SNORA16A-201ENST00000384342 137 ntBASIC5.19□□□□□ -1.58
PCDH1Q08174 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
PCDH1Q08174 Y_RNA.645-201ENST00000391229 102 ntBASIC5.19□□□□□ -1.58
PCDH1Q08174 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC5.19□□□□□ -1.58
PCDH1Q08174 RNA5SP296-201ENST00000410523 111 ntBASIC5.19□□□□□ -1.58
PCDH1Q08174 AC080125.1-201ENST00000414888 684 ntBASIC5.19□□□□□ -1.58
PCDH1Q08174 HMGB1P25-201ENST00000468402 607 ntBASIC5.19□□□□□ -1.58
PCDH1Q08174 AC010631.1-201ENST00000474150 156 ntBASIC5.19□□□□□ -1.58
PCDH1Q08174 RN7SL717P-201ENST00000478343 297 ntBASIC5.19□□□□□ -1.58
PCDH1Q08174 AC023424.1-201ENST00000496058 459 ntBASIC5.19□□□□□ -1.58
PCDH1Q08174 ENPP7P11-201ENST00000505915 627 ntBASIC5.19□□□□□ -1.58
PCDH1Q08174 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.19□□□□□ -1.58
PCDH1Q08174 SCARNA16.4-201ENST00000516956 187 ntBASIC5.19□□□□□ -1.58
PCDH1Q08174 SNORD116.3-201ENST00000517176 78 ntBASIC5.19□□□□□ -1.58
PCDH1Q08174 AC087854.1-201ENST00000519706 414 ntBASIC5.19□□□□□ -1.58
PCDH1Q08174 AC103783.1-201ENST00000520506 373 ntBASIC5.19□□□□□ -1.58
PCDH1Q08174 RN7SL290P-201ENST00000578661 300 ntBASIC5.19□□□□□ -1.58
PCDH1Q08174 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.19□□□□□ -1.58
PCDH1Q08174 AC006254.3-201ENST00000603353 884 ntBASIC5.19□□□□□ -1.58
PCDH1Q08174 AC018889.1-201ENST00000605372 397 ntBASIC5.19□□□□□ -1.58
PCDH1Q08174 AC100812.1-201ENST00000607622 580 ntBASIC5.19□□□□□ -1.58
PCDH1Q08174 AC004696.1-201ENST00000614345 607 ntBASIC5.19□□□□□ -1.58
PCDH1Q08174 AC007998.5-201ENST00000622938 237 ntBASIC5.19□□□□□ -1.58
PCDH1Q08174 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.19□□□□□ -1.58
PCDH1Q08174 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PCDH1Q08174 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
PCDH1Q08174 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PCDH1Q08174 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PCDH1Q08174 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
PCDH1Q08174 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
PCDH1Q08174 AC112198.2-201ENST00000426589 6996 ntBASIC5.19□□□□□ -1.58
PCDH1Q08174 AC083843.2-201ENST00000568248 6253 ntBASIC5.19□□□□□ -1.58
PCDH1Q08174 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PCDH1Q08174 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.18□□□□□ -1.58
PCDH1Q08174 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PCDH1Q08174 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
PCDH1Q08174 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.18□□□□□ -1.58
PCDH1Q08174 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PCDH1Q08174 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
PCDH1Q08174 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PCDH1Q08174 RNU6-989P-201ENST00000362756 107 ntBASIC5.18□□□□□ -1.58
PCDH1Q08174 RNU6-99P-201ENST00000364721 107 ntBASIC5.18□□□□□ -1.58
PCDH1Q08174 RNU6-95P-201ENST00000384697 107 ntBASIC5.18□□□□□ -1.58
PCDH1Q08174 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
PCDH1Q08174 RNA5SP487-201ENST00000410186 122 ntBASIC5.18□□□□□ -1.58
PCDH1Q08174 COX5BP7-201ENST00000414780 274 ntBASIC5.18□□□□□ -1.58
PCDH1Q08174 USMG5P1-201ENST00000425964 177 ntBASIC5.18□□□□□ -1.58
PCDH1Q08174 AL669831.1-202ENST00000428504 417 ntBASIC5.18□□□□□ -1.58
PCDH1Q08174 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC5.18□□□□□ -1.58
PCDH1Q08174 RPL19P16-201ENST00000433839 588 ntBASIC5.18□□□□□ -1.58
PCDH1Q08174 AL390119.1-201ENST00000440329 312 ntBASIC5.18□□□□□ -1.58
PCDH1Q08174 RPL23AP33-201ENST00000442301 452 ntBASIC5.18□□□□□ -1.58
PCDH1Q08174 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.18□□□□□ -1.58
PCDH1Q08174 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC5.18□□□□□ -1.58
PCDH1Q08174 ABCC13-202ENST00000463099 3842 ntBASIC5.18□□□□□ -1.58
PCDH1Q08174 AC092451.1-201ENST00000480211 153 ntBASIC5.18□□□□□ -1.58
PCDH1Q08174 NDUFB5P1-201ENST00000508134 564 ntBASIC5.18□□□□□ -1.58
PCDH1Q08174 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.18□□□□□ -1.58
PCDH1Q08174 CYCSP27-201ENST00000527643 293 ntBASIC5.18□□□□□ -1.58
PCDH1Q08174 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.18□□□□□ -1.58
PCDH1Q08174 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.18□□□□□ -1.58
PCDH1Q08174 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC5.18□□□□□ -1.58
PCDH1Q08174 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
PCDH1Q08174 AC000068.2-201ENST00000608816 460 ntBASIC5.18□□□□□ -1.58
PCDH1Q08174 MIR6839-201ENST00000620425 113 ntBASIC5.18□□□□□ -1.58
PCDH1Q08174 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PCDH1Q08174 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.18□□□□□ -1.58
PCDH1Q08174 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.18□□□□□ -1.58
PCDH1Q08174 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PCDH1Q08174 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
PCDH1Q08174 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC5.17□□□□□ -1.58
PCDH1Q08174 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.17□□□□□ -1.58
PCDH1Q08174 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PCDH1Q08174 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PCDH1Q08174 AC104118.1-201ENST00000607625 1589 ntBASIC5.17□□□□□ -1.58
PCDH1Q08174 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
PCDH1Q08174 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PCDH1Q08174 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.17□□□□□ -1.58
PCDH1Q08174 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.17□□□□□ -1.58
PCDH1Q08174 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
PCDH1Q08174 RN7SKP124-201ENST00000364730 341 ntBASIC5.17□□□□□ -1.58
PCDH1Q08174 RN7SKP153-201ENST00000365026 316 ntBASIC5.17□□□□□ -1.58
PCDH1Q08174 OR1L6-202ENST00000373684 1044 ntBASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 129.4 ms