Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 RPS4XP13-201ENST00000483219 789 ntBASIC3.18□□□□□ -1.9
CDKL1Q00532 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CDKL1Q00532 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.18□□□□□ -1.9
CDKL1Q00532 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.18□□□□□ -1.9
CDKL1Q00532 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.18□□□□□ -1.9
CDKL1Q00532 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC3.18□□□□□ -1.9
CDKL1Q00532 MLLT10P2-201ENST00000506434 249 ntBASIC3.18□□□□□ -1.9
CDKL1Q00532 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.18□□□□□ -1.9
CDKL1Q00532 KLHL2P1-201ENST00000508691 521 ntBASIC3.18□□□□□ -1.9
CDKL1Q00532 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CDKL1Q00532 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CDKL1Q00532 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.18□□□□□ -1.9
CDKL1Q00532 SNRPGP16-201ENST00000533275 226 ntBASIC3.18□□□□□ -1.9
CDKL1Q00532 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.18□□□□□ -1.9
CDKL1Q00532 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC3.18□□□□□ -1.9
CDKL1Q00532 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC3.18□□□□□ -1.9
CDKL1Q00532 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.18□□□□□ -1.9
CDKL1Q00532 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.18□□□□□ -1.9
CDKL1Q00532 FAM60BP-201ENST00000578364 658 ntBASIC3.18□□□□□ -1.9
CDKL1Q00532 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.18□□□□□ -1.9
CDKL1Q00532 MIR3158-1-201ENST00000583596 81 ntBASIC3.18□□□□□ -1.9
CDKL1Q00532 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC3.18□□□□□ -1.9
CDKL1Q00532 BBIP1P1-201ENST00000602999 279 ntBASIC3.18□□□□□ -1.9
CDKL1Q00532 AC009220.3-201ENST00000604318 586 ntBASIC3.18□□□□□ -1.9
CDKL1Q00532 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC3.18□□□□□ -1.9
CDKL1Q00532 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.18□□□□□ -1.9
CDKL1Q00532 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.18□□□□□ -1.9
CDKL1Q00532 AC015967.1-201ENST00000619893 476 ntBASIC3.18□□□□□ -1.9
CDKL1Q00532 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.18□□□□□ -1.9
CDKL1Q00532 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
CDKL1Q00532 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.18□□□□□ -1.9
CDKL1Q00532 AC008264.2-201ENST00000610193 3731 ntBASIC3.17□□□□□ -1.9
CDKL1Q00532 AL390862.1-201ENST00000635467 1469 ntBASIC3.17□□□□□ -1.9
CDKL1Q00532 RNU6-28P-201ENST00000362378 107 ntBASIC3.17□□□□□ -1.9
CDKL1Q00532 ANAPC10P1-201ENST00000395991 556 ntBASIC3.17□□□□□ -1.9
CDKL1Q00532 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CDKL1Q00532 RNU2-71P-201ENST00000411395 189 ntBASIC3.17□□□□□ -1.9
CDKL1Q00532 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.17□□□□□ -1.9
CDKL1Q00532 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC3.17□□□□□ -1.9
CDKL1Q00532 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.17□□□□□ -1.9
CDKL1Q00532 AC002381.1-201ENST00000447049 280 ntBASIC3.17□□□□□ -1.9
CDKL1Q00532 AC115115.1-201ENST00000449927 248 ntBASIC3.17□□□□□ -1.9
CDKL1Q00532 ELOCP23-201ENST00000452014 332 ntBASIC3.17□□□□□ -1.9
CDKL1Q00532 HMGN2P16-201ENST00000456802 261 ntBASIC3.17□□□□□ -1.9
CDKL1Q00532 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.17□□□□□ -1.9
CDKL1Q00532 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.17□□□□□ -1.9
CDKL1Q00532 SNORA67.7-201ENST00000516664 135 ntBASIC3.17□□□□□ -1.9
CDKL1Q00532 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CDKL1Q00532 HSPA8P13-201ENST00000523715 472 ntBASIC3.17□□□□□ -1.9
CDKL1Q00532 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.17□□□□□ -1.9
CDKL1Q00532 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC3.17□□□□□ -1.9
CDKL1Q00532 CR383656.7-201ENST00000548164 174 ntBASIC3.17□□□□□ -1.9
CDKL1Q00532 HIGD1AP1-201ENST00000550979 275 ntBASIC3.17□□□□□ -1.9
CDKL1Q00532 MTND1P24-201ENST00000552175 861 ntBASIC3.17□□□□□ -1.9
CDKL1Q00532 AC009712.1-201ENST00000564938 316 ntBASIC3.17□□□□□ -1.9
CDKL1Q00532 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.17□□□□□ -1.9
CDKL1Q00532 AC053481.3-201ENST00000577881 843 ntBASIC3.17□□□□□ -1.9
CDKL1Q00532 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.17□□□□□ -1.9
CDKL1Q00532 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.17□□□□□ -1.9
CDKL1Q00532 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.17□□□□□ -1.9
CDKL1Q00532 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC3.17□□□□□ -1.9
CDKL1Q00532 AC004853.1-201ENST00000604902 698 ntBASIC3.17□□□□□ -1.9
CDKL1Q00532 AC080013.4-201ENST00000607624 649 ntBASIC3.17□□□□□ -1.9
CDKL1Q00532 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.17□□□□□ -1.9
CDKL1Q00532 AC099778.2-201ENST00000610904 211 ntBASIC3.17□□□□□ -1.9
CDKL1Q00532 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.17□□□□□ -1.9
CDKL1Q00532 AL353748.2-201ENST00000622148 471 ntBASIC3.17□□□□□ -1.9
CDKL1Q00532 AL161637.1-201ENST00000622380 412 ntBASIC3.17□□□□□ -1.9
CDKL1Q00532 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.17□□□□□ -1.9
CDKL1Q00532 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.17□□□□□ -1.9
CDKL1Q00532 AC005183.1-201ENST00000603687 1979 ntBASIC3.17□□□□□ -1.9
CDKL1Q00532 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.17□□□□□ -1.9
CDKL1Q00532 AL079343.1-201ENST00000572358 1771 ntBASIC3.17□□□□□ -1.9
CDKL1Q00532 AP001148.1-201ENST00000624124 2359 ntBASIC3.17□□□□□ -1.9
CDKL1Q00532 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CDKL1Q00532 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
CDKL1Q00532 AC005539.1-201ENST00000443768 1479 ntBASIC3.16□□□□□ -1.9
CDKL1Q00532 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
CDKL1Q00532 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CDKL1Q00532 RNU6-777P-201ENST00000364265 104 ntBASIC3.16□□□□□ -1.9
CDKL1Q00532 MIR490-201ENST00000384865 128 ntBASIC3.16□□□□□ -1.9
CDKL1Q00532 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CDKL1Q00532 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.16□□□□□ -1.9
CDKL1Q00532 OR1AA1P-201ENST00000419597 916 ntBASIC3.16□□□□□ -1.9
CDKL1Q00532 AL953862.1-201ENST00000423016 168 ntBASIC3.16□□□□□ -1.9
CDKL1Q00532 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.16□□□□□ -1.9
CDKL1Q00532 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.16□□□□□ -1.9
CDKL1Q00532 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.16□□□□□ -1.9
CDKL1Q00532 ZYG11AP1-201ENST00000430329 837 ntBASIC3.16□□□□□ -1.9
CDKL1Q00532 RPL23AP69-201ENST00000431134 458 ntBASIC3.16□□□□□ -1.9
CDKL1Q00532 AL159987.2-201ENST00000432754 307 ntBASIC3.16□□□□□ -1.9
CDKL1Q00532 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC3.16□□□□□ -1.9
CDKL1Q00532 AL117351.1-201ENST00000438864 766 ntBASIC3.16□□□□□ -1.9
CDKL1Q00532 MEMO1P3-201ENST00000459811 302 ntBASIC3.16□□□□□ -1.9
CDKL1Q00532 AC008155.2-201ENST00000464337 397 ntBASIC3.16□□□□□ -1.9
CDKL1Q00532 RPL31P50-201ENST00000471002 296 ntBASIC3.16□□□□□ -1.9
CDKL1Q00532 ST13P14-201ENST00000474095 734 ntBASIC3.16□□□□□ -1.9
CDKL1Q00532 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.16□□□□□ -1.9
CDKL1Q00532 FAM172BP-201ENST00000487497 1089 ntBASIC3.16□□□□□ -1.9
CDKL1Q00532 HMGB1P36-201ENST00000487709 576 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms