Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 Y_RNA.557-201ENST00000384680 107 ntBASIC4.78□□□□□ -1.64
YBX1P67809 AL357515.1-201ENST00000402967 542 ntBASIC4.78□□□□□ -1.64
YBX1P67809 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
YBX1P67809 PSMA6P3-201ENST00000428242 164 ntBASIC4.78□□□□□ -1.64
YBX1P67809 EIF4A1P11-201ENST00000451239 222 ntBASIC4.78□□□□□ -1.64
YBX1P67809 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC4.78□□□□□ -1.64
YBX1P67809 CECR9-201ENST00000453421 199 ntBASIC4.78□□□□□ -1.64
YBX1P67809 AC009963.2-201ENST00000453431 138 ntBASIC4.78□□□□□ -1.64
YBX1P67809 AC108059.3-201ENST00000456388 214 ntBASIC4.78□□□□□ -1.64
YBX1P67809 AP001992.1-205ENST00000462248 379 ntBASIC4.78□□□□□ -1.64
YBX1P67809 AL136126.1-201ENST00000473603 402 ntBASIC4.78□□□□□ -1.64
YBX1P67809 AC140172.1-201ENST00000502928 141 ntBASIC4.78□□□□□ -1.64
YBX1P67809 AC093767.1-201ENST00000504523 156 ntBASIC4.78□□□□□ -1.64
YBX1P67809 CCDC34P1-201ENST00000507441 517 ntBASIC4.78□□□□□ -1.64
YBX1P67809 ENPP7P9-201ENST00000514456 627 ntBASIC4.78□□□□□ -1.64
YBX1P67809 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC4.78□□□□□ -1.64
YBX1P67809 RNU6-976P-201ENST00000516086 111 ntBASIC4.78□□□□□ -1.64
YBX1P67809 RNA5SP464-201ENST00000516251 108 ntBASIC4.78□□□□□ -1.64
YBX1P67809 RNU6-764P-201ENST00000516396 105 ntBASIC4.78□□□□□ -1.64
YBX1P67809 RNU6-347P-201ENST00000516658 105 ntBASIC4.78□□□□□ -1.64
YBX1P67809 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC4.78□□□□□ -1.64
YBX1P67809 AP001922.4-201ENST00000526967 290 ntBASIC4.78□□□□□ -1.64
YBX1P67809 AC109635.4-202ENST00000531666 412 ntBASIC4.78□□□□□ -1.64
YBX1P67809 AC008033.2-201ENST00000542626 177 ntBASIC4.78□□□□□ -1.64
YBX1P67809 IMMP1LP2-201ENST00000552954 492 ntBASIC4.78□□□□□ -1.64
YBX1P67809 AC010653.1-201ENST00000571108 881 ntBASIC4.78□□□□□ -1.64
YBX1P67809 MIR4703-201ENST00000577728 79 ntBASIC4.78□□□□□ -1.64
YBX1P67809 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.78□□□□□ -1.64
YBX1P67809 MIR4436B2-201ENST00000581415 91 ntBASIC4.78□□□□□ -1.64
YBX1P67809 AC069061.3-201ENST00000582254 823 ntBASIC4.78□□□□□ -1.64
YBX1P67809 MIR4436B1-201ENST00000583272 91 ntBASIC4.78□□□□□ -1.64
YBX1P67809 RN7SL435P-201ENST00000584418 282 ntBASIC4.78□□□□□ -1.64
YBX1P67809 AL670379.11-201ENST00000604059 253 ntBASIC4.78□□□□□ -1.64
YBX1P67809 AL670379.10-201ENST00000604330 253 ntBASIC4.78□□□□□ -1.64
YBX1P67809 AL670379.12-201ENST00000605291 253 ntBASIC4.78□□□□□ -1.64
YBX1P67809 AL670379.9-201ENST00000605428 253 ntBASIC4.78□□□□□ -1.64
YBX1P67809 AC010424.2-201ENST00000607594 443 ntBASIC4.78□□□□□ -1.64
YBX1P67809 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.78□□□□□ -1.64
YBX1P67809 AL022401.1-201ENST00000619498 108 ntBASIC4.78□□□□□ -1.64
YBX1P67809 AC087385.3-201ENST00000620477 187 ntBASIC4.78□□□□□ -1.64
YBX1P67809 Z69720.2-201ENST00000624755 279 ntBASIC4.78□□□□□ -1.64
YBX1P67809 U6.114-201ENST00000636407 96 ntBASIC4.78□□□□□ -1.64
YBX1P67809 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
YBX1P67809 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
YBX1P67809 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.78□□□□□ -1.64
YBX1P67809 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
YBX1P67809 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.77□□□□□ -1.65
YBX1P67809 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
YBX1P67809 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
YBX1P67809 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.77□□□□□ -1.65
YBX1P67809 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
YBX1P67809 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
YBX1P67809 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.77□□□□□ -1.65
YBX1P67809 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
YBX1P67809 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC4.77□□□□□ -1.65
YBX1P67809 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.77□□□□□ -1.65
YBX1P67809 Y_RNA.476-201ENST00000384347 108 ntBASIC4.77□□□□□ -1.65
YBX1P67809 RNU6-1222P-201ENST00000384615 107 ntBASIC4.77□□□□□ -1.65
YBX1P67809 RNU6-278P-201ENST00000390945 109 ntBASIC4.77□□□□□ -1.65
YBX1P67809 MRPL42P3-201ENST00000401492 326 ntBASIC4.77□□□□□ -1.65
YBX1P67809 MIR1271-201ENST00000408537 86 ntBASIC4.77□□□□□ -1.65
YBX1P67809 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
YBX1P67809 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.77□□□□□ -1.65
YBX1P67809 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.77□□□□□ -1.65
YBX1P67809 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.77□□□□□ -1.65
YBX1P67809 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.77□□□□□ -1.65
YBX1P67809 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.77□□□□□ -1.65
YBX1P67809 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC4.77□□□□□ -1.65
YBX1P67809 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.77□□□□□ -1.65
YBX1P67809 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.77□□□□□ -1.65
YBX1P67809 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.77□□□□□ -1.65
YBX1P67809 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.77□□□□□ -1.65
YBX1P67809 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC4.77□□□□□ -1.65
YBX1P67809 AL162395.1-201ENST00000457882 422 ntBASIC4.77□□□□□ -1.65
YBX1P67809 RPL23AP56-201ENST00000460778 453 ntBASIC4.77□□□□□ -1.65
YBX1P67809 AC087879.1-201ENST00000474343 374 ntBASIC4.77□□□□□ -1.65
YBX1P67809 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.77□□□□□ -1.65
YBX1P67809 RN7SL591P-201ENST00000496150 292 ntBASIC4.77□□□□□ -1.65
YBX1P67809 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.77□□□□□ -1.65
YBX1P67809 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
YBX1P67809 Y_RNA.654-201ENST00000497848 106 ntBASIC4.77□□□□□ -1.65
YBX1P67809 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC4.77□□□□□ -1.65
YBX1P67809 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC4.77□□□□□ -1.65
YBX1P67809 AC017037.2-201ENST00000513850 890 ntBASIC4.77□□□□□ -1.65
YBX1P67809 HMGB1P19-201ENST00000517578 577 ntBASIC4.77□□□□□ -1.65
YBX1P67809 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.77□□□□□ -1.65
YBX1P67809 CYCSP40-201ENST00000575927 294 ntBASIC4.77□□□□□ -1.65
YBX1P67809 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.77□□□□□ -1.65
YBX1P67809 AC073539.2-201ENST00000597113 165 ntBASIC4.77□□□□□ -1.65
YBX1P67809 AC087783.2-201ENST00000605070 562 ntBASIC4.77□□□□□ -1.65
YBX1P67809 Z82243.1-201ENST00000609432 473 ntBASIC4.77□□□□□ -1.65
YBX1P67809 AC091905.4-201ENST00000623432 202 ntBASIC4.77□□□□□ -1.65
YBX1P67809 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC4.77□□□□□ -1.65
YBX1P67809 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
YBX1P67809 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
YBX1P67809 AC005005.4-201ENST00000623789 16698 ntBASIC4.77□□□□□ -1.65
YBX1P67809 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
YBX1P67809 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
YBX1P67809 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.77□□□□□ -1.65
YBX1P67809 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms