Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
LMO4P61968 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.12□□□□□ -1.91
LMO4P61968 AC090337.1-201ENST00000579651 2074 ntBASIC3.12□□□□□ -1.91
LMO4P61968 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
LMO4P61968 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
LMO4P61968 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.11□□□□□ -1.91
LMO4P61968 AL031985.3-201ENST00000565390 2449 ntBASIC3.11□□□□□ -1.91
LMO4P61968 UBE3AP2-201ENST00000429033 2259 ntBASIC3.11□□□□□ -1.91
LMO4P61968 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
LMO4P61968 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
LMO4P61968 SNORD46.1-201ENST00000364139 104 ntBASIC3.11□□□□□ -1.91
LMO4P61968 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.11□□□□□ -1.91
LMO4P61968 RNU6-723P-201ENST00000383973 107 ntBASIC3.11□□□□□ -1.91
LMO4P61968 RNU5A-6P-201ENST00000384136 116 ntBASIC3.11□□□□□ -1.91
LMO4P61968 SNORD115-47-201ENST00000391226 86 ntBASIC3.11□□□□□ -1.91
LMO4P61968 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
LMO4P61968 AL121972.1-201ENST00000402023 252 ntBASIC3.11□□□□□ -1.91
LMO4P61968 AL603766.1-201ENST00000407763 664 ntBASIC3.11□□□□□ -1.91
LMO4P61968 AL133384.1-201ENST00000412744 351 ntBASIC3.11□□□□□ -1.91
LMO4P61968 AC245052.5-201ENST00000416320 649 ntBASIC3.11□□□□□ -1.91
LMO4P61968 CCDC58P2-201ENST00000417131 366 ntBASIC3.11□□□□□ -1.91
LMO4P61968 HSPD1P21-201ENST00000436541 245 ntBASIC3.11□□□□□ -1.91
LMO4P61968 AC244505.5-201ENST00000443639 207 ntBASIC3.11□□□□□ -1.91
LMO4P61968 SLC31A1P1-201ENST00000451221 567 ntBASIC3.11□□□□□ -1.91
LMO4P61968 RPS20P32-201ENST00000456044 356 ntBASIC3.11□□□□□ -1.91
LMO4P61968 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.11□□□□□ -1.91
LMO4P61968 SNORD42A-201ENST00000459584 64 ntBASIC3.11□□□□□ -1.91
LMO4P61968 RPL31P58-201ENST00000469001 379 ntBASIC3.11□□□□□ -1.91
LMO4P61968 AC084198.1-201ENST00000477747 402 ntBASIC3.11□□□□□ -1.91
LMO4P61968 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.11□□□□□ -1.91
LMO4P61968 AC105252.1-201ENST00000503089 286 ntBASIC3.11□□□□□ -1.91
LMO4P61968 MTCYBP17-201ENST00000503579 789 ntBASIC3.11□□□□□ -1.91
LMO4P61968 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.11□□□□□ -1.91
LMO4P61968 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.11□□□□□ -1.91
LMO4P61968 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
LMO4P61968 RAC1P2-201ENST00000511164 579 ntBASIC3.11□□□□□ -1.91
LMO4P61968 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC3.11□□□□□ -1.91
LMO4P61968 AC026726.1-201ENST00000512859 601 ntBASIC3.11□□□□□ -1.91
LMO4P61968 RN7SKP18-201ENST00000516005 275 ntBASIC3.11□□□□□ -1.91
LMO4P61968 RNU6-314P-201ENST00000516574 104 ntBASIC3.11□□□□□ -1.91
LMO4P61968 RN7SKP116-201ENST00000516902 319 ntBASIC3.11□□□□□ -1.91
LMO4P61968 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC3.11□□□□□ -1.91
LMO4P61968 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.11□□□□□ -1.91
LMO4P61968 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.11□□□□□ -1.91
LMO4P61968 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.11□□□□□ -1.91
LMO4P61968 AC124947.2-202ENST00000552735 133 ntBASIC3.11□□□□□ -1.91
LMO4P61968 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.11□□□□□ -1.91
LMO4P61968 AC091489.2-201ENST00000566263 604 ntBASIC3.11□□□□□ -1.91
LMO4P61968 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC3.11□□□□□ -1.91
LMO4P61968 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.11□□□□□ -1.91
LMO4P61968 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.11□□□□□ -1.91
LMO4P61968 AC233280.2-201ENST00000603917 1070 ntBASIC3.11□□□□□ -1.91
LMO4P61968 AC069304.2-201ENST00000605154 435 ntBASIC3.11□□□□□ -1.91
LMO4P61968 HMGN2P28-201ENST00000606102 262 ntBASIC3.11□□□□□ -1.91
LMO4P61968 AC080013.4-201ENST00000607624 649 ntBASIC3.11□□□□□ -1.91
LMO4P61968 AC091834.1-201ENST00000614543 472 ntBASIC3.11□□□□□ -1.91
LMO4P61968 AC027807.2-201ENST00000616099 408 ntBASIC3.11□□□□□ -1.91
LMO4P61968 CR381653.2-201ENST00000624041 768 ntBASIC3.11□□□□□ -1.91
LMO4P61968 AC138649.5-201ENST00000637456 137 ntBASIC3.11□□□□□ -1.91
LMO4P61968 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
LMO4P61968 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
LMO4P61968 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
LMO4P61968 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.11□□□□□ -1.91
LMO4P61968 AL359893.1-201ENST00000447628 1580 ntBASIC3.11□□□□□ -1.91
LMO4P61968 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
LMO4P61968 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
LMO4P61968 NEAT1-202ENST00000501122 22743 ntBASIC3.11□□□□□ -1.91
LMO4P61968 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
LMO4P61968 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
LMO4P61968 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
LMO4P61968 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
LMO4P61968 IPO8P1-201ENST00000455509 3109 ntBASIC3.1□□□□□ -1.91
LMO4P61968 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
LMO4P61968 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
LMO4P61968 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
LMO4P61968 AC097504.1-201ENST00000515103 2415 ntBASIC3.1□□□□□ -1.91
LMO4P61968 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.1□□□□□ -1.91
LMO4P61968 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
LMO4P61968 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.1□□□□□ -1.91
LMO4P61968 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.1□□□□□ -1.91
LMO4P61968 XIAPP3-201ENST00000312918 795 ntBASIC3.1□□□□□ -1.91
LMO4P61968 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.1□□□□□ -1.91
LMO4P61968 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
LMO4P61968 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
LMO4P61968 RNA5SP52-201ENST00000362448 134 ntBASIC3.1□□□□□ -1.91
LMO4P61968 Y_RNA.25-201ENST00000362528 102 ntBASIC3.1□□□□□ -1.91
LMO4P61968 Y_RNA.256-201ENST00000364594 104 ntBASIC3.1□□□□□ -1.91
LMO4P61968 RNU5E-5P-201ENST00000365379 116 ntBASIC3.1□□□□□ -1.91
LMO4P61968 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.1□□□□□ -1.91
LMO4P61968 MIR181A1-201ENST00000385026 110 ntBASIC3.1□□□□□ -1.91
LMO4P61968 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.1□□□□□ -1.91
LMO4P61968 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.1□□□□□ -1.91
LMO4P61968 AC109780.2-201ENST00000413467 845 ntBASIC3.1□□□□□ -1.91
LMO4P61968 USP9YP6-201ENST00000413550 854 ntBASIC3.1□□□□□ -1.91
LMO4P61968 RPS29P4-201ENST00000414733 161 ntBASIC3.1□□□□□ -1.91
LMO4P61968 AL953862.1-201ENST00000423016 168 ntBASIC3.1□□□□□ -1.91
LMO4P61968 GLRXP1-201ENST00000423261 334 ntBASIC3.1□□□□□ -1.91
LMO4P61968 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.1□□□□□ -1.91
LMO4P61968 AC011742.1-201ENST00000431448 434 ntBASIC3.1□□□□□ -1.91
LMO4P61968 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms