Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PER3P56645 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PER3P56645 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PER3P56645 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
PER3P56645 AC107068.1-201ENST00000563286 4218 ntBASIC4.36□□□□□ -1.71
PER3P56645 RPL7P26-201ENST00000333817 754 ntBASIC4.36□□□□□ -1.71
PER3P56645 RNA5SP388-201ENST00000362584 119 ntBASIC4.36□□□□□ -1.71
PER3P56645 U3.11-201ENST00000364476 212 ntBASIC4.36□□□□□ -1.71
PER3P56645 RNA5SP479-201ENST00000364858 117 ntBASIC4.36□□□□□ -1.71
PER3P56645 SNORA70F-201ENST00000384142 135 ntBASIC4.36□□□□□ -1.71
PER3P56645 RNA5SP372-201ENST00000390836 115 ntBASIC4.36□□□□□ -1.71
PER3P56645 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PER3P56645 AL592291.1-201ENST00000403830 352 ntBASIC4.36□□□□□ -1.71
PER3P56645 MIR1250-201ENST00000408098 113 ntBASIC4.36□□□□□ -1.71
PER3P56645 RNU6-1068P-201ENST00000410958 103 ntBASIC4.36□□□□□ -1.71
PER3P56645 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.36□□□□□ -1.71
PER3P56645 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC4.36□□□□□ -1.71
PER3P56645 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.36□□□□□ -1.71
PER3P56645 RPS20P5-201ENST00000434808 360 ntBASIC4.36□□□□□ -1.71
PER3P56645 AC098614.3-201ENST00000438957 440 ntBASIC4.36□□□□□ -1.71
PER3P56645 RPL7AP61-201ENST00000443410 636 ntBASIC4.36□□□□□ -1.71
PER3P56645 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PER3P56645 AC006480.1-201ENST00000449887 378 ntBASIC4.36□□□□□ -1.71
PER3P56645 AL691482.1-201ENST00000453255 87 ntBASIC4.36□□□□□ -1.71
PER3P56645 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.36□□□□□ -1.71
PER3P56645 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.36□□□□□ -1.71
PER3P56645 AC233702.1-201ENST00000482905 502 ntBASIC4.36□□□□□ -1.71
PER3P56645 AC068305.1-201ENST00000497406 726 ntBASIC4.36□□□□□ -1.71
PER3P56645 AC135721.1-201ENST00000497954 479 ntBASIC4.36□□□□□ -1.71
PER3P56645 AC139783.2-201ENST00000504847 1145 ntBASIC4.36□□□□□ -1.71
PER3P56645 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC4.36□□□□□ -1.71
PER3P56645 PCBP2P3-201ENST00000509726 843 ntBASIC4.36□□□□□ -1.71
PER3P56645 AC025465.4-201ENST00000513422 638 ntBASIC4.36□□□□□ -1.71
PER3P56645 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC4.36□□□□□ -1.71
PER3P56645 RNA5SP401-201ENST00000515920 127 ntBASIC4.36□□□□□ -1.71
PER3P56645 RN7SKP21-201ENST00000516503 220 ntBASIC4.36□□□□□ -1.71
PER3P56645 OR4R1P-201ENST00000529879 463 ntBASIC4.36□□□□□ -1.71
PER3P56645 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.36□□□□□ -1.71
PER3P56645 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4.36□□□□□ -1.71
PER3P56645 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.36□□□□□ -1.71
PER3P56645 DYNLL1P4-201ENST00000549314 266 ntBASIC4.36□□□□□ -1.71
PER3P56645 RPL21P7-201ENST00000557463 483 ntBASIC4.36□□□□□ -1.71
PER3P56645 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.36□□□□□ -1.71
PER3P56645 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC4.36□□□□□ -1.71
PER3P56645 FGF7P1-201ENST00000582820 288 ntBASIC4.36□□□□□ -1.71
PER3P56645 NRBF2P5-201ENST00000603087 788 ntBASIC4.36□□□□□ -1.71
PER3P56645 AC012669.1-201ENST00000603209 283 ntBASIC4.36□□□□□ -1.71
PER3P56645 AC010680.4-201ENST00000605334 543 ntBASIC4.36□□□□□ -1.71
PER3P56645 AL158211.4-201ENST00000606988 584 ntBASIC4.36□□□□□ -1.71
PER3P56645 FAM27B-201ENST00000610601 213 ntBASIC4.36□□□□□ -1.71
PER3P56645 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC4.36□□□□□ -1.71
PER3P56645 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.36□□□□□ -1.71
PER3P56645 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.36□□□□□ -1.71
PER3P56645 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.36□□□□□ -1.71
PER3P56645 MIR6715B-201ENST00000637172 77 ntBASIC4.36□□□□□ -1.71
PER3P56645 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PER3P56645 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.36□□□□□ -1.71
PER3P56645 FAM91A3P-201ENST00000456826 2544 ntBASIC4.36□□□□□ -1.71
PER3P56645 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.36□□□□□ -1.71
PER3P56645 AC007390.2-201ENST00000606229 3803 ntBASIC4.36□□□□□ -1.71
PER3P56645 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PER3P56645 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PER3P56645 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
PER3P56645 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.35□□□□□ -1.71
PER3P56645 AC068254.2-201ENST00000623938 3577 ntBASIC4.35□□□□□ -1.71
PER3P56645 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PER3P56645 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.35□□□□□ -1.71
PER3P56645 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
PER3P56645 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.35□□□□□ -1.71
PER3P56645 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.35□□□□□ -1.71
PER3P56645 AC006020.1-201ENST00000420179 1854 ntBASIC4.35□□□□□ -1.71
PER3P56645 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PER3P56645 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
PER3P56645 RNA5SP447-201ENST00000363749 119 ntBASIC4.35□□□□□ -1.71
PER3P56645 SNORD113.2-201ENST00000364166 89 ntBASIC4.35□□□□□ -1.71
PER3P56645 Y_RNA.279-201ENST00000364763 95 ntBASIC4.35□□□□□ -1.71
PER3P56645 Y_RNA.367-201ENST00000365544 101 ntBASIC4.35□□□□□ -1.71
PER3P56645 MIR558-201ENST00000384920 94 ntBASIC4.35□□□□□ -1.71
PER3P56645 LAP3P1-201ENST00000403648 294 ntBASIC4.35□□□□□ -1.71
PER3P56645 HDGFP1-201ENST00000405943 252 ntBASIC4.35□□□□□ -1.71
PER3P56645 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.35□□□□□ -1.71
PER3P56645 U3.32-201ENST00000408116 212 ntBASIC4.35□□□□□ -1.71
PER3P56645 RNU4-25P-201ENST00000410569 230 ntBASIC4.35□□□□□ -1.71
PER3P56645 ELOCP19-201ENST00000411919 318 ntBASIC4.35□□□□□ -1.71
PER3P56645 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.35□□□□□ -1.71
PER3P56645 TBCAP2-201ENST00000416175 326 ntBASIC4.35□□□□□ -1.71
PER3P56645 EIF4EP1-201ENST00000422311 642 ntBASIC4.35□□□□□ -1.71
PER3P56645 AC012498.1-201ENST00000424037 437 ntBASIC4.35□□□□□ -1.71
PER3P56645 RPL23AP1-201ENST00000428990 471 ntBASIC4.35□□□□□ -1.71
PER3P56645 CKS1BP5-201ENST00000434172 273 ntBASIC4.35□□□□□ -1.71
PER3P56645 RPS26P2-201ENST00000440331 348 ntBASIC4.35□□□□□ -1.71
PER3P56645 AC140076.1-201ENST00000449897 361 ntBASIC4.35□□□□□ -1.71
PER3P56645 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC4.35□□□□□ -1.71
PER3P56645 AC092001.1-201ENST00000453012 261 ntBASIC4.35□□□□□ -1.71
PER3P56645 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.35□□□□□ -1.71
PER3P56645 RPS20P20-201ENST00000460498 340 ntBASIC4.35□□□□□ -1.71
PER3P56645 AC109327.1-201ENST00000471666 403 ntBASIC4.35□□□□□ -1.71
PER3P56645 RPS3AP50-201ENST00000487064 803 ntBASIC4.35□□□□□ -1.71
PER3P56645 SNORD27.1-201ENST00000516319 72 ntBASIC4.35□□□□□ -1.71
PER3P56645 MIR2116-201ENST00000517221 80 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms