Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SUMO3P55854 Y_RNA.409-201ENST00000383990 98 ntBASIC4.07□□□□□ -1.76
SUMO3P55854 RNU6-398P-201ENST00000384143 109 ntBASIC4.07□□□□□ -1.76
SUMO3P55854 Y_RNA.450-201ENST00000384198 113 ntBASIC4.07□□□□□ -1.76
SUMO3P55854 RNU6-74P-201ENST00000384235 107 ntBASIC4.07□□□□□ -1.76
SUMO3P55854 RNU6-39P-201ENST00000384344 107 ntBASIC4.07□□□□□ -1.76
SUMO3P55854 MIR659-201ENST00000384963 97 ntBASIC4.07□□□□□ -1.76
SUMO3P55854 RNU2-36P-201ENST00000410361 191 ntBASIC4.07□□□□□ -1.76
SUMO3P55854 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.07□□□□□ -1.76
SUMO3P55854 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.07□□□□□ -1.76
SUMO3P55854 RPL23AP30-201ENST00000432419 501 ntBASIC4.07□□□□□ -1.76
SUMO3P55854 RPS6P12-201ENST00000432491 726 ntBASIC4.07□□□□□ -1.76
SUMO3P55854 AL132765.1-201ENST00000434165 553 ntBASIC4.07□□□□□ -1.76
SUMO3P55854 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.07□□□□□ -1.76
SUMO3P55854 RPS20P5-201ENST00000434808 360 ntBASIC4.07□□□□□ -1.76
SUMO3P55854 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC4.07□□□□□ -1.76
SUMO3P55854 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.07□□□□□ -1.76
SUMO3P55854 RPL26P6-201ENST00000440913 438 ntBASIC4.07□□□□□ -1.76
SUMO3P55854 AC011753.3-201ENST00000443436 406 ntBASIC4.07□□□□□ -1.76
SUMO3P55854 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.07□□□□□ -1.76
SUMO3P55854 SNRPGP6-201ENST00000451124 220 ntBASIC4.07□□□□□ -1.76
SUMO3P55854 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SUMO3P55854 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SUMO3P55854 RAD23BP3-201ENST00000454157 1152 ntBASIC4.07□□□□□ -1.76
SUMO3P55854 snoU13.4-201ENST00000458916 104 ntBASIC4.07□□□□□ -1.76
SUMO3P55854 AL121769.1-201ENST00000469473 401 ntBASIC4.07□□□□□ -1.76
SUMO3P55854 AC010631.1-201ENST00000474150 156 ntBASIC4.07□□□□□ -1.76
SUMO3P55854 RN7SL812P-201ENST00000493791 279 ntBASIC4.07□□□□□ -1.76
SUMO3P55854 AC109927.2-201ENST00000506416 303 ntBASIC4.07□□□□□ -1.76
SUMO3P55854 ARL2BPP6-201ENST00000512757 439 ntBASIC4.07□□□□□ -1.76
SUMO3P55854 Y_RNA.693-201ENST00000516641 110 ntBASIC4.07□□□□□ -1.76
SUMO3P55854 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC4.07□□□□□ -1.76
SUMO3P55854 AC093012.1-202ENST00000549403 582 ntBASIC4.07□□□□□ -1.76
SUMO3P55854 AL157687.1-201ENST00000554853 619 ntBASIC4.07□□□□□ -1.76
SUMO3P55854 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4.07□□□□□ -1.76
SUMO3P55854 OR4H12P-201ENST00000556269 907 ntBASIC4.07□□□□□ -1.76
SUMO3P55854 AC010201.1-201ENST00000605051 540 ntBASIC4.07□□□□□ -1.76
SUMO3P55854 Z84480.1-201ENST00000605131 311 ntBASIC4.07□□□□□ -1.76
SUMO3P55854 AL109618.2-201ENST00000605527 211 ntBASIC4.07□□□□□ -1.76
SUMO3P55854 AP001330.5-201ENST00000607176 411 ntBASIC4.07□□□□□ -1.76
SUMO3P55854 AL355810.1-201ENST00000614629 552 ntBASIC4.07□□□□□ -1.76
SUMO3P55854 AC112200.1-201ENST00000625015 234 ntBASIC4.07□□□□□ -1.76
SUMO3P55854 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.07□□□□□ -1.76
SUMO3P55854 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.07□□□□□ -1.76
SUMO3P55854 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SUMO3P55854 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
SUMO3P55854 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
SUMO3P55854 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.07□□□□□ -1.76
SUMO3P55854 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SUMO3P55854 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.07□□□□□ -1.76
SUMO3P55854 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SUMO3P55854 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SUMO3P55854 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SUMO3P55854 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
SUMO3P55854 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SUMO3P55854 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.06□□□□□ -1.76
SUMO3P55854 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SUMO3P55854 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SUMO3P55854 AC073343.1-201ENST00000328239 651 ntBASIC4.06□□□□□ -1.76
SUMO3P55854 SNORA31-201ENST00000362607 130 ntBASIC4.06□□□□□ -1.76
SUMO3P55854 RNU1-20P-201ENST00000363314 162 ntBASIC4.06□□□□□ -1.76
SUMO3P55854 RNY4P14-201ENST00000363656 96 ntBASIC4.06□□□□□ -1.76
SUMO3P55854 RNU6-960P-201ENST00000364056 120 ntBASIC4.06□□□□□ -1.76
SUMO3P55854 RNA5SP189-201ENST00000364920 115 ntBASIC4.06□□□□□ -1.76
SUMO3P55854 RNA5SP22-201ENST00000365393 109 ntBASIC4.06□□□□□ -1.76
SUMO3P55854 MIR195-201ENST00000385194 87 ntBASIC4.06□□□□□ -1.76
SUMO3P55854 MIR607-201ENST00000385241 96 ntBASIC4.06□□□□□ -1.76
SUMO3P55854 RPS4XP8-201ENST00000402039 771 ntBASIC4.06□□□□□ -1.76
SUMO3P55854 AL359634.1-202ENST00000404721 284 ntBASIC4.06□□□□□ -1.76
SUMO3P55854 HMGB3P20-201ENST00000417997 600 ntBASIC4.06□□□□□ -1.76
SUMO3P55854 AC245028.1-201ENST00000423259 256 ntBASIC4.06□□□□□ -1.76
SUMO3P55854 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SUMO3P55854 AL512326.1-201ENST00000443050 721 ntBASIC4.06□□□□□ -1.76
SUMO3P55854 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC4.06□□□□□ -1.76
SUMO3P55854 AC111000.3-201ENST00000508057 576 ntBASIC4.06□□□□□ -1.76
SUMO3P55854 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.06□□□□□ -1.76
SUMO3P55854 RNU6-718P-201ENST00000516166 105 ntBASIC4.06□□□□□ -1.76
SUMO3P55854 RNU6-1073P-201ENST00000517182 106 ntBASIC4.06□□□□□ -1.76
SUMO3P55854 RN7SKP92-201ENST00000517266 244 ntBASIC4.06□□□□□ -1.76
SUMO3P55854 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC4.06□□□□□ -1.76
SUMO3P55854 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.06□□□□□ -1.76
SUMO3P55854 CDH12P4-201ENST00000517835 295 ntBASIC4.06□□□□□ -1.76
SUMO3P55854 CDH12P3-201ENST00000517935 295 ntBASIC4.06□□□□□ -1.76
SUMO3P55854 CDH12P1-201ENST00000518435 295 ntBASIC4.06□□□□□ -1.76
SUMO3P55854 HMGB1P41-201ENST00000520234 440 ntBASIC4.06□□□□□ -1.76
SUMO3P55854 ERHP1-201ENST00000523006 310 ntBASIC4.06□□□□□ -1.76
SUMO3P55854 OR4R1P-201ENST00000529879 463 ntBASIC4.06□□□□□ -1.76
SUMO3P55854 SNRPGP16-201ENST00000533275 226 ntBASIC4.06□□□□□ -1.76
SUMO3P55854 AHI1-217ENST00000534469 680 ntTSL 3 BASIC4.06□□□□□ -1.76
SUMO3P55854 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC4.06□□□□□ -1.76
SUMO3P55854 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.06□□□□□ -1.76
SUMO3P55854 RPL23AP97-201ENST00000568955 471 ntBASIC4.06□□□□□ -1.76
SUMO3P55854 HMGB1P6-201ENST00000569046 646 ntBASIC4.06□□□□□ -1.76
SUMO3P55854 AC025449.1-201ENST00000603896 529 ntBASIC4.06□□□□□ -1.76
SUMO3P55854 AC012409.3-201ENST00000611343 981 ntBASIC4.06□□□□□ -1.76
SUMO3P55854 AC004696.1-201ENST00000614345 607 ntBASIC4.06□□□□□ -1.76
SUMO3P55854 AC110801.1-201ENST00000623590 212 ntBASIC4.06□□□□□ -1.76
SUMO3P55854 AC007546.2-201ENST00000623996 360 ntBASIC4.06□□□□□ -1.76
SUMO3P55854 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.06□□□□□ -1.76
SUMO3P55854 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms