Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC2.94□□□□□ -1.94
CDH6P55285 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC2.94□□□□□ -1.94
CDH6P55285 AC111000.2-201ENST00000507775 550 ntBASIC2.94□□□□□ -1.94
CDH6P55285 AC010374.2-201ENST00000512933 535 ntBASIC2.94□□□□□ -1.94
CDH6P55285 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.94□□□□□ -1.94
CDH6P55285 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.94□□□□□ -1.94
CDH6P55285 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.94□□□□□ -1.94
CDH6P55285 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CDH6P55285 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC2.94□□□□□ -1.94
CDH6P55285 MED28P6-201ENST00000558776 231 ntBASIC2.94□□□□□ -1.94
CDH6P55285 ZNF971P-201ENST00000562068 1249 ntBASIC2.94□□□□□ -1.94
CDH6P55285 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC2.94□□□□□ -1.94
CDH6P55285 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.94□□□□□ -1.94
CDH6P55285 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC2.94□□□□□ -1.94
CDH6P55285 AC005776.1-201ENST00000603164 290 ntBASIC2.94□□□□□ -1.94
CDH6P55285 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.94□□□□□ -1.94
CDH6P55285 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC2.94□□□□□ -1.94
CDH6P55285 AC078880.5-201ENST00000617845 421 ntBASIC2.94□□□□□ -1.94
CDH6P55285 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
CDH6P55285 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.94□□□□□ -1.94
CDH6P55285 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.94□□□□□ -1.94
CDH6P55285 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CDH6P55285 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.93□□□□□ -1.94
CDH6P55285 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.93□□□□□ -1.94
CDH6P55285 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
CDH6P55285 RPL21P75-201ENST00000396599 483 ntBASIC2.93□□□□□ -1.94
CDH6P55285 RPL21P28-201ENST00000401418 483 ntBASIC2.93□□□□□ -1.94
CDH6P55285 AL592114.1-201ENST00000403842 483 ntBASIC2.93□□□□□ -1.94
CDH6P55285 RNA5SP344-201ENST00000411081 104 ntBASIC2.93□□□□□ -1.94
CDH6P55285 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC2.93□□□□□ -1.94
CDH6P55285 EEF1A1P41-201ENST00000414667 207 ntBASIC2.93□□□□□ -1.94
CDH6P55285 MTCO2P1-201ENST00000424648 477 ntBASIC2.93□□□□□ -1.94
CDH6P55285 RAC1P8-201ENST00000427086 527 ntBASIC2.93□□□□□ -1.94
CDH6P55285 MTCYBP32-201ENST00000427945 1084 ntBASIC2.93□□□□□ -1.94
CDH6P55285 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.93□□□□□ -1.94
CDH6P55285 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.93□□□□□ -1.94
CDH6P55285 AL096829.2-201ENST00000446582 742 ntBASIC2.93□□□□□ -1.94
CDH6P55285 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC2.93□□□□□ -1.94
CDH6P55285 AL589880.1-201ENST00000448271 287 ntBASIC2.93□□□□□ -1.94
CDH6P55285 RPL21P39-201ENST00000463605 483 ntBASIC2.93□□□□□ -1.94
CDH6P55285 AC011979.1-201ENST00000472300 483 ntBASIC2.93□□□□□ -1.94
CDH6P55285 RPL21P93-201ENST00000480465 489 ntBASIC2.93□□□□□ -1.94
CDH6P55285 AC233702.1-201ENST00000482905 502 ntBASIC2.93□□□□□ -1.94
CDH6P55285 AC087190.1-201ENST00000484462 480 ntBASIC2.93□□□□□ -1.94
CDH6P55285 AC093591.1-201ENST00000491435 481 ntBASIC2.93□□□□□ -1.94
CDH6P55285 RPL21P16-201ENST00000495531 483 ntBASIC2.93□□□□□ -1.94
CDH6P55285 AC010625.1-201ENST00000511296 403 ntBASIC2.93□□□□□ -1.94
CDH6P55285 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC2.93□□□□□ -1.94
CDH6P55285 SCARNA13-201ENST00000516672 275 ntBASIC2.93□□□□□ -1.94
CDH6P55285 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC2.93□□□□□ -1.94
CDH6P55285 AP003049.1-201ENST00000529418 457 ntBASIC2.93□□□□□ -1.94
CDH6P55285 AC068339.2-201ENST00000534395 618 ntBASIC2.93□□□□□ -1.94
CDH6P55285 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC2.93□□□□□ -1.94
CDH6P55285 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.93□□□□□ -1.94
CDH6P55285 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.93□□□□□ -1.94
CDH6P55285 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.93□□□□□ -1.94
CDH6P55285 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.93□□□□□ -1.94
CDH6P55285 AP000238.1-201ENST00000608759 426 ntBASIC2.93□□□□□ -1.94
CDH6P55285 AP005137.2-201ENST00000609238 400 ntBASIC2.93□□□□□ -1.94
CDH6P55285 AP000676.4-201ENST00000624659 623 ntBASIC2.93□□□□□ -1.94
CDH6P55285 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.93□□□□□ -1.94
CDH6P55285 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CDH6P55285 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.93□□□□□ -1.94
CDH6P55285 AL513185.3-201ENST00000433335 1300 ntBASIC2.93□□□□□ -1.94
CDH6P55285 AC233263.6-201ENST00000631132 1963 ntBASIC2.92□□□□□ -1.94
CDH6P55285 AL355596.1-201ENST00000565399 3996 ntBASIC2.92□□□□□ -1.94
CDH6P55285 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CDH6P55285 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.92□□□□□ -1.94
CDH6P55285 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.92□□□□□ -1.94
CDH6P55285 RNU6-207P-201ENST00000384137 107 ntBASIC2.92□□□□□ -1.94
CDH6P55285 SNORA44-201ENST00000384584 132 ntBASIC2.92□□□□□ -1.94
CDH6P55285 SNORA1.3-201ENST00000384676 136 ntBASIC2.92□□□□□ -1.94
CDH6P55285 RPS4XP3-201ENST00000398541 413 ntBASIC2.92□□□□□ -1.94
CDH6P55285 AL136372.1-201ENST00000403060 228 ntBASIC2.92□□□□□ -1.94
CDH6P55285 SNORA11.1-201ENST00000408133 129 ntBASIC2.92□□□□□ -1.94
CDH6P55285 RNU2-15P-201ENST00000410692 191 ntBASIC2.92□□□□□ -1.94
CDH6P55285 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.92□□□□□ -1.94
CDH6P55285 MTCO3P1-205ENST00000422088 832 ntBASIC2.92□□□□□ -1.94
CDH6P55285 Z93242.1-201ENST00000427102 353 ntBASIC2.92□□□□□ -1.94
CDH6P55285 AL139132.1-201ENST00000431587 344 ntBASIC2.92□□□□□ -1.94
CDH6P55285 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.92□□□□□ -1.94
CDH6P55285 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
CDH6P55285 AC112653.1-201ENST00000443851 386 ntBASIC2.92□□□□□ -1.94
CDH6P55285 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.92□□□□□ -1.94
CDH6P55285 OR6K5P-201ENST00000447050 945 ntBASIC2.92□□□□□ -1.94
CDH6P55285 AL590664.1-201ENST00000448065 339 ntBASIC2.92□□□□□ -1.94
CDH6P55285 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC2.92□□□□□ -1.94
CDH6P55285 AC003982.1-202ENST00000469928 248 ntBASIC2.92□□□□□ -1.94
CDH6P55285 RPL30P14-201ENST00000482744 348 ntBASIC2.92□□□□□ -1.94
CDH6P55285 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.92□□□□□ -1.94
CDH6P55285 AC117522.3-201ENST00000507974 584 ntBASIC2.92□□□□□ -1.94
CDH6P55285 CBX3P3-201ENST00000508108 532 ntBASIC2.92□□□□□ -1.94
CDH6P55285 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.92□□□□□ -1.94
CDH6P55285 SNORA48.10-201ENST00000516965 160 ntBASIC2.92□□□□□ -1.94
CDH6P55285 AC113192.3-201ENST00000529152 742 ntBASIC2.92□□□□□ -1.94
CDH6P55285 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.92□□□□□ -1.94
CDH6P55285 AC090502.2-201ENST00000549267 280 ntBASIC2.92□□□□□ -1.94
CDH6P55285 AC006504.3-201ENST00000586818 523 ntBASIC2.92□□□□□ -1.94
CDH6P55285 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.92□□□□□ -1.94
CDH6P55285 DUXAP4-201ENST00000603046 613 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 128.6 ms