Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AC022960.3-201ENST00000619794 441 ntBASIC3.43□□□□□ -1.86
VCPP55072 U1.39-201ENST00000621562 146 ntBASIC3.43□□□□□ -1.86
VCPP55072 AC090772.4-201ENST00000623599 362 ntBASIC3.43□□□□□ -1.86
VCPP55072 CR381572.1-201ENST00000625098 102 ntBASIC3.43□□□□□ -1.86
VCPP55072 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.43□□□□□ -1.86
VCPP55072 MTND5P27-201ENST00000428871 1720 ntBASIC3.43□□□□□ -1.86
VCPP55072 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
VCPP55072 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
VCPP55072 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
VCPP55072 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
VCPP55072 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
VCPP55072 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
VCPP55072 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
VCPP55072 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
VCPP55072 RNU1-70P-201ENST00000362618 164 ntBASIC3.42□□□□□ -1.86
VCPP55072 RNU6-251P-201ENST00000363235 104 ntBASIC3.42□□□□□ -1.86
VCPP55072 RNU6-1249P-201ENST00000363237 111 ntBASIC3.42□□□□□ -1.86
VCPP55072 RNU6-1066P-201ENST00000363573 105 ntBASIC3.42□□□□□ -1.86
VCPP55072 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
VCPP55072 AL136133.1-201ENST00000413694 376 ntBASIC3.42□□□□□ -1.86
VCPP55072 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC3.42□□□□□ -1.86
VCPP55072 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC3.42□□□□□ -1.86
VCPP55072 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.42□□□□□ -1.86
VCPP55072 RPL7P46-201ENST00000425129 740 ntBASIC3.42□□□□□ -1.86
VCPP55072 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
VCPP55072 DPRXP1-201ENST00000426312 460 ntBASIC3.42□□□□□ -1.86
VCPP55072 DPPA2P1-201ENST00000428060 556 ntBASIC3.42□□□□□ -1.86
VCPP55072 AC005345.1-201ENST00000431868 217 ntBASIC3.42□□□□□ -1.86
VCPP55072 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.42□□□□□ -1.86
VCPP55072 CST9LP2-201ENST00000437612 320 ntBASIC3.42□□□□□ -1.86
VCPP55072 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC3.42□□□□□ -1.86
VCPP55072 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
VCPP55072 Z99127.3-201ENST00000448158 395 ntBASIC3.42□□□□□ -1.86
VCPP55072 AC079776.3-201ENST00000450665 370 ntBASIC3.42□□□□□ -1.86
VCPP55072 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.42□□□□□ -1.86
VCPP55072 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.42□□□□□ -1.86
VCPP55072 RPL21P131-201ENST00000497298 483 ntBASIC3.42□□□□□ -1.86
VCPP55072 UBE2V1P12-201ENST00000503954 474 ntBASIC3.42□□□□□ -1.86
VCPP55072 YWHAEP4-201ENST00000505390 198 ntBASIC3.42□□□□□ -1.86
VCPP55072 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC3.42□□□□□ -1.86
VCPP55072 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.42□□□□□ -1.86
VCPP55072 ARL2BPP5-201ENST00000523141 481 ntBASIC3.42□□□□□ -1.86
VCPP55072 AP001317.1-201ENST00000531194 960 ntBASIC3.42□□□□□ -1.86
VCPP55072 AP002404.1-201ENST00000532005 451 ntBASIC3.42□□□□□ -1.86
VCPP55072 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.42□□□□□ -1.86
VCPP55072 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.42□□□□□ -1.86
VCPP55072 MTCYBP23-201ENST00000558717 1102 ntBASIC3.42□□□□□ -1.86
VCPP55072 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.42□□□□□ -1.86
VCPP55072 AC128687.1-201ENST00000605304 619 ntBASIC3.42□□□□□ -1.86
VCPP55072 TUG1_1.1-201ENST00000610654 145 ntBASIC3.42□□□□□ -1.86
VCPP55072 uc_338.1-201ENST00000612113 180 ntBASIC3.42□□□□□ -1.86
VCPP55072 AC092650.2-201ENST00000619984 902 ntBASIC3.42□□□□□ -1.86
VCPP55072 OR1S1-201ENST00000624470 978 ntBASIC3.42□□□□□ -1.86
VCPP55072 IGHVIII-44-202ENST00000636235 289 ntBASIC3.42□□□□□ -1.86
VCPP55072 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
VCPP55072 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.42□□□□□ -1.86
VCPP55072 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
VCPP55072 AL136360.1-201ENST00000503377 1900 ntBASIC3.42□□□□□ -1.86
VCPP55072 AC004972.1-201ENST00000623934 2209 ntBASIC3.42□□□□□ -1.86
VCPP55072 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
VCPP55072 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.41□□□□□ -1.86
VCPP55072 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.41□□□□□ -1.86
VCPP55072 OR56A5-201ENST00000340110 738 ntBASIC3.41□□□□□ -1.86
VCPP55072 RNU4-82P-201ENST00000362443 140 ntBASIC3.41□□□□□ -1.86
VCPP55072 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.41□□□□□ -1.86
VCPP55072 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
VCPP55072 SNORD65.1-201ENST00000390889 71 ntBASIC3.41□□□□□ -1.86
VCPP55072 RNU6-1300P-201ENST00000391046 108 ntBASIC3.41□□□□□ -1.86
VCPP55072 SAR1AP2-201ENST00000392696 594 ntBASIC3.41□□□□□ -1.86
VCPP55072 RNU4-65P-201ENST00000410473 140 ntBASIC3.41□□□□□ -1.86
VCPP55072 RNA5SP229-201ENST00000410809 99 ntBASIC3.41□□□□□ -1.86
VCPP55072 Z75741.2-201ENST00000417272 1167 ntBASIC3.41□□□□□ -1.86
VCPP55072 FNDC3CP-201ENST00000420795 1155 ntBASIC3.41□□□□□ -1.86
VCPP55072 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.41□□□□□ -1.86
VCPP55072 AL035407.1-201ENST00000429211 571 ntBASIC3.41□□□□□ -1.86
VCPP55072 RPL31P54-201ENST00000429803 370 ntBASIC3.41□□□□□ -1.86
VCPP55072 SEPT7P5-201ENST00000434048 306 ntBASIC3.41□□□□□ -1.86
VCPP55072 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.41□□□□□ -1.86
VCPP55072 GTF2IP7-202ENST00000436677 309 ntBASIC3.41□□□□□ -1.86
VCPP55072 AC241584.1-201ENST00000438469 1241 ntBASIC3.41□□□□□ -1.86
VCPP55072 AC093155.1-201ENST00000440164 826 ntBASIC3.41□□□□□ -1.86
VCPP55072 AC004854.1-201ENST00000440356 349 ntBASIC3.41□□□□□ -1.86
VCPP55072 ATP5C1P1-201ENST00000441945 895 ntBASIC3.41□□□□□ -1.86
VCPP55072 HSPE1P28-201ENST00000443139 211 ntBASIC3.41□□□□□ -1.86
VCPP55072 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.41□□□□□ -1.86
VCPP55072 AL031313.1-201ENST00000448435 256 ntBASIC3.41□□□□□ -1.86
VCPP55072 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.41□□□□□ -1.86
VCPP55072 AC112492.1-201ENST00000449607 712 ntBASIC3.41□□□□□ -1.86
VCPP55072 AC006483.1-201ENST00000487308 313 ntBASIC3.41□□□□□ -1.86
VCPP55072 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.41□□□□□ -1.86
VCPP55072 BOLA3P3-201ENST00000505182 232 ntBASIC3.41□□□□□ -1.86
VCPP55072 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.41□□□□□ -1.86
VCPP55072 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.41□□□□□ -1.86
VCPP55072 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.41□□□□□ -1.86
VCPP55072 AC068657.1-201ENST00000520807 306 ntBASIC3.41□□□□□ -1.86
VCPP55072 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.41□□□□□ -1.86
VCPP55072 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.41□□□□□ -1.86
VCPP55072 BNIP3P40-201ENST00000596017 556 ntBASIC3.41□□□□□ -1.86
VCPP55072 AC245884.10-201ENST00000597355 337 ntBASIC3.41□□□□□ -1.86
VCPP55072 GAS5-AS1-201ENST00000602767 694 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms