Protein–RNA interactions for Protein: P54253

ATXN1, Ataxin-1, humanhuman

Known RBP Predictions only

Length 815 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1P54253 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.56□□□□□ -1.68
ATXN1P54253 RPL23AP2-201ENST00000471227 466 ntBASIC4.56□□□□□ -1.68
ATXN1P54253 AL132838.2-201ENST00000492041 314 ntBASIC4.56□□□□□ -1.68
ATXN1P54253 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC4.56□□□□□ -1.68
ATXN1P54253 AC114981.1-201ENST00000503897 678 ntBASIC4.56□□□□□ -1.68
ATXN1P54253 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.56□□□□□ -1.68
ATXN1P54253 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.56□□□□□ -1.68
ATXN1P54253 RNU6-314P-201ENST00000516574 104 ntBASIC4.56□□□□□ -1.68
ATXN1P54253 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.56□□□□□ -1.68
ATXN1P54253 AC090151.1-201ENST00000520784 730 ntBASIC4.56□□□□□ -1.68
ATXN1P54253 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC4.56□□□□□ -1.68
ATXN1P54253 AC092470.1-201ENST00000546187 132 ntBASIC4.56□□□□□ -1.68
ATXN1P54253 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.56□□□□□ -1.68
ATXN1P54253 RPL23AP97-201ENST00000568955 471 ntBASIC4.56□□□□□ -1.68
ATXN1P54253 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.56□□□□□ -1.68
ATXN1P54253 AC005255.1-201ENST00000593748 216 ntBASIC4.56□□□□□ -1.68
ATXN1P54253 AC079587.1-201ENST00000603846 277 ntBASIC4.56□□□□□ -1.68
ATXN1P54253 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.56□□□□□ -1.68
ATXN1P54253 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.56□□□□□ -1.68
ATXN1P54253 AC019193.3-201ENST00000609144 554 ntBASIC4.56□□□□□ -1.68
ATXN1P54253 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC4.56□□□□□ -1.68
ATXN1P54253 AC007546.1-201ENST00000619452 559 ntBASIC4.56□□□□□ -1.68
ATXN1P54253 AC090574.1-201ENST00000623186 233 ntBASIC4.56□□□□□ -1.68
ATXN1P54253 AC112484.5-201ENST00000624189 228 ntBASIC4.56□□□□□ -1.68
ATXN1P54253 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
ATXN1P54253 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
ATXN1P54253 ZNF519P1-201ENST00000449011 1626 ntBASIC4.56□□□□□ -1.68
ATXN1P54253 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC4.56□□□□□ -1.68
ATXN1P54253 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
ATXN1P54253 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
ATXN1P54253 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
ATXN1P54253 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
ATXN1P54253 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
ATXN1P54253 AC117529.2-201ENST00000512159 2068 ntBASIC4.55□□□□□ -1.68
ATXN1P54253 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
ATXN1P54253 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
ATXN1P54253 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
ATXN1P54253 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.55□□□□□ -1.68
ATXN1P54253 OR5P1P-201ENST00000299512 925 ntBASIC4.55□□□□□ -1.68
ATXN1P54253 MIR3065-201ENST00000390137 79 ntBASIC4.55□□□□□ -1.68
ATXN1P54253 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.55□□□□□ -1.68
ATXN1P54253 RNU6ATAC-201ENST00000408749 126 ntBASIC4.55□□□□□ -1.68
ATXN1P54253 RN7SKP177-201ENST00000410567 355 ntBASIC4.55□□□□□ -1.68
ATXN1P54253 MIR1911-201ENST00000410783 80 ntBASIC4.55□□□□□ -1.68
ATXN1P54253 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC4.55□□□□□ -1.68
ATXN1P54253 AC092832.1-201ENST00000422934 400 ntBASIC4.55□□□□□ -1.68
ATXN1P54253 RPL23AP38-201ENST00000423801 469 ntBASIC4.55□□□□□ -1.68
ATXN1P54253 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC4.55□□□□□ -1.68
ATXN1P54253 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
ATXN1P54253 AL117339.2-201ENST00000430475 180 ntBASIC4.55□□□□□ -1.68
ATXN1P54253 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC4.55□□□□□ -1.68
ATXN1P54253 RPS3AP54-201ENST00000435535 734 ntBASIC4.55□□□□□ -1.68
ATXN1P54253 SNRPEP7-201ENST00000438350 220 ntBASIC4.55□□□□□ -1.68
ATXN1P54253 DNAJC19P4-201ENST00000440115 345 ntBASIC4.55□□□□□ -1.68
ATXN1P54253 AC114495.1-201ENST00000441274 436 ntBASIC4.55□□□□□ -1.68
ATXN1P54253 RPS3AP12-201ENST00000443616 753 ntBASIC4.55□□□□□ -1.68
ATXN1P54253 MTCO3P2-201ENST00000457365 171 ntBASIC4.55□□□□□ -1.68
ATXN1P54253 RPL7P22-201ENST00000466005 733 ntBASIC4.55□□□□□ -1.68
ATXN1P54253 AP000926.1-201ENST00000479573 241 ntBASIC4.55□□□□□ -1.68
ATXN1P54253 AC108022.1-201ENST00000493466 478 ntBASIC4.55□□□□□ -1.68
ATXN1P54253 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
ATXN1P54253 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
ATXN1P54253 AC005798.1-201ENST00000513715 387 ntBASIC4.55□□□□□ -1.68
ATXN1P54253 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.55□□□□□ -1.68
ATXN1P54253 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.55□□□□□ -1.68
ATXN1P54253 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.55□□□□□ -1.68
ATXN1P54253 RN7SKP298-201ENST00000515950 94 ntBASIC4.55□□□□□ -1.68
ATXN1P54253 RNU6-123P-201ENST00000516163 102 ntBASIC4.55□□□□□ -1.68
ATXN1P54253 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.55□□□□□ -1.68
ATXN1P54253 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
ATXN1P54253 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC4.55□□□□□ -1.68
ATXN1P54253 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC4.55□□□□□ -1.68
ATXN1P54253 TRAV8-5-201ENST00000537369 341 ntBASIC4.55□□□□□ -1.68
ATXN1P54253 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.55□□□□□ -1.68
ATXN1P54253 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC4.55□□□□□ -1.68
ATXN1P54253 BNIP3P23-201ENST00000599655 511 ntBASIC4.55□□□□□ -1.68
ATXN1P54253 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.55□□□□□ -1.68
ATXN1P54253 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.55□□□□□ -1.68
ATXN1P54253 AC091834.1-201ENST00000614543 472 ntBASIC4.55□□□□□ -1.68
ATXN1P54253 U73479.1-201ENST00000618062 168 ntBASIC4.55□□□□□ -1.68
ATXN1P54253 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.55□□□□□ -1.68
ATXN1P54253 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
ATXN1P54253 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
ATXN1P54253 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
ATXN1P54253 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.54□□□□□ -1.68
ATXN1P54253 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
ATXN1P54253 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
ATXN1P54253 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.54□□□□□ -1.68
ATXN1P54253 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
ATXN1P54253 AC139713.2-215ENST00000641428 5037 ntBASIC4.54□□□□□ -1.68
ATXN1P54253 RN7SKP44-201ENST00000363602 316 ntBASIC4.54□□□□□ -1.68
ATXN1P54253 RNU5E-5P-201ENST00000365379 116 ntBASIC4.54□□□□□ -1.68
ATXN1P54253 VDAC1P9-201ENST00000412766 841 ntBASIC4.54□□□□□ -1.68
ATXN1P54253 SDCBPP3-201ENST00000419629 891 ntBASIC4.54□□□□□ -1.68
ATXN1P54253 AC005517.2-201ENST00000424673 553 ntBASIC4.54□□□□□ -1.68
ATXN1P54253 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.54□□□□□ -1.68
ATXN1P54253 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC4.54□□□□□ -1.68
ATXN1P54253 RPL37P21-201ENST00000435890 276 ntBASIC4.54□□□□□ -1.68
ATXN1P54253 AC104850.1-201ENST00000435940 476 ntBASIC4.54□□□□□ -1.68
ATXN1P54253 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms