Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
POLR2JP52435 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
POLR2JP52435 RNU6-799P-201ENST00000363567 107 ntBASIC1.91□□□□□ -2.1
POLR2JP52435 MIR483-201ENST00000385070 76 ntBASIC1.91□□□□□ -2.1
POLR2JP52435 AL024474.1-201ENST00000404655 591 ntBASIC1.91□□□□□ -2.1
POLR2JP52435 SUMO2P12-201ENST00000405924 140 ntBASIC1.91□□□□□ -2.1
POLR2JP52435 AC007064.1-201ENST00000412238 351 ntBASIC1.91□□□□□ -2.1
POLR2JP52435 AL513477.1-202ENST00000417061 214 ntBASIC1.91□□□□□ -2.1
POLR2JP52435 AC234782.4-201ENST00000417646 1048 ntBASIC1.91□□□□□ -2.1
POLR2JP52435 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.91□□□□□ -2.1
POLR2JP52435 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC1.91□□□□□ -2.1
POLR2JP52435 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC1.91□□□□□ -2.1
POLR2JP52435 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.91□□□□□ -2.1
POLR2JP52435 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.91□□□□□ -2.1
POLR2JP52435 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC1.91□□□□□ -2.1
POLR2JP52435 HMGN1P5-201ENST00000448591 263 ntBASIC1.91□□□□□ -2.1
POLR2JP52435 RPL31P20-201ENST00000449593 360 ntBASIC1.91□□□□□ -2.1
POLR2JP52435 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC1.91□□□□□ -2.1
POLR2JP52435 AC021146.7-201ENST00000509604 775 ntBASIC1.91□□□□□ -2.1
POLR2JP52435 FABP5P6-201ENST00000510588 409 ntBASIC1.91□□□□□ -2.1
POLR2JP52435 AC016065.2-201ENST00000514530 444 ntBASIC1.91□□□□□ -2.1
POLR2JP52435 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC1.91□□□□□ -2.1
POLR2JP52435 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.91□□□□□ -2.1
POLR2JP52435 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC1.91□□□□□ -2.1
POLR2JP52435 OR11H5P-201ENST00000554039 926 ntBASIC1.91□□□□□ -2.1
POLR2JP52435 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC1.91□□□□□ -2.1
POLR2JP52435 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.91□□□□□ -2.1
POLR2JP52435 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.91□□□□□ -2.1
POLR2JP52435 AL356266.1-201ENST00000623311 483 ntBASIC1.91□□□□□ -2.1
POLR2JP52435 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC1.91□□□□□ -2.1
POLR2JP52435 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.91□□□□□ -2.1
POLR2JP52435 PSMD5-AS1-215ENST00000640622 205 ntBASIC1.91□□□□□ -2.1
POLR2JP52435 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.91□□□□□ -2.1
POLR2JP52435 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
POLR2JP52435 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.91□□□□□ -2.1
POLR2JP52435 AC091564.4-201ENST00000533934 2194 ntBASIC1.91□□□□□ -2.1
POLR2JP52435 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC1.9□□□□□ -2.1
POLR2JP52435 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
POLR2JP52435 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC1.9□□□□□ -2.1
POLR2JP52435 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC1.9□□□□□ -2.1
POLR2JP52435 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
POLR2JP52435 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
POLR2JP52435 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
POLR2JP52435 RNU6-761P-201ENST00000384148 107 ntBASIC1.9□□□□□ -2.11
POLR2JP52435 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
POLR2JP52435 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
POLR2JP52435 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
POLR2JP52435 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC1.9□□□□□ -2.11
POLR2JP52435 BTF3P9-201ENST00000418784 283 ntBASIC1.9□□□□□ -2.11
POLR2JP52435 UBE2V1P6-201ENST00000430840 422 ntBASIC1.9□□□□□ -2.11
POLR2JP52435 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC1.9□□□□□ -2.11
POLR2JP52435 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC1.9□□□□□ -2.11
POLR2JP52435 AC011753.1-201ENST00000451001 220 ntBASIC1.9□□□□□ -2.11
POLR2JP52435 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.9□□□□□ -2.11
POLR2JP52435 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC1.9□□□□□ -2.11
POLR2JP52435 MTCO3P11-201ENST00000455103 774 ntBASIC1.9□□□□□ -2.11
POLR2JP52435 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC1.9□□□□□ -2.11
POLR2JP52435 AC104090.1-201ENST00000506341 1171 ntBASIC1.9□□□□□ -2.11
POLR2JP52435 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC1.9□□□□□ -2.11
POLR2JP52435 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC1.9□□□□□ -2.11
POLR2JP52435 AC019227.1-201ENST00000526902 510 ntBASIC1.9□□□□□ -2.11
POLR2JP52435 AP003385.6-201ENST00000531603 374 ntBASIC1.9□□□□□ -2.11
POLR2JP52435 AP003717.3-201ENST00000544832 1180 ntBASIC1.9□□□□□ -2.11
POLR2JP52435 MIR5089-201ENST00000580047 84 ntBASIC1.9□□□□□ -2.11
POLR2JP52435 AC079089.3-201ENST00000603094 673 ntBASIC1.9□□□□□ -2.11
POLR2JP52435 CR589904.2-201ENST00000612533 440 ntBASIC1.9□□□□□ -2.11
POLR2JP52435 NF1P10-201ENST00000613227 742 ntBASIC1.9□□□□□ -2.11
POLR2JP52435 AC008083.4-201ENST00000615076 444 ntBASIC1.9□□□□□ -2.11
POLR2JP52435 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.11
POLR2JP52435 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
POLR2JP52435 AL359693.1-201ENST00000614959 2407 ntBASIC1.9□□□□□ -2.11
POLR2JP52435 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
POLR2JP52435 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC1.89□□□□□ -2.11
POLR2JP52435 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
POLR2JP52435 RNU6-50P-201ENST00000362356 103 ntBASIC1.89□□□□□ -2.11
POLR2JP52435 SNORA11.1-201ENST00000408133 129 ntBASIC1.89□□□□□ -2.11
POLR2JP52435 RNU4-65P-201ENST00000410473 140 ntBASIC1.89□□□□□ -2.11
POLR2JP52435 MTCYBP24-201ENST00000420387 1106 ntBASIC1.89□□□□□ -2.11
POLR2JP52435 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC1.89□□□□□ -2.11
POLR2JP52435 RPL7P37-201ENST00000425095 738 ntBASIC1.89□□□□□ -2.11
POLR2JP52435 RPL23AP83-201ENST00000434984 473 ntBASIC1.89□□□□□ -2.11
POLR2JP52435 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.89□□□□□ -2.11
POLR2JP52435 MTCYBP12-201ENST00000440559 1134 ntBASIC1.89□□□□□ -2.11
POLR2JP52435 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC1.89□□□□□ -2.11
POLR2JP52435 NFU1-207ENST00000462320 558 ntTSL 4 BASIC1.89□□□□□ -2.11
POLR2JP52435 SYPL1P1-201ENST00000473622 768 ntBASIC1.89□□□□□ -2.11
POLR2JP52435 OR5H5P-201ENST00000503164 928 ntBASIC1.89□□□□□ -2.11
POLR2JP52435 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
POLR2JP52435 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC1.89□□□□□ -2.11
POLR2JP52435 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC1.89□□□□□ -2.11
POLR2JP52435 VN1R78P-201ENST00000597393 564 ntBASIC1.89□□□□□ -2.11
POLR2JP52435 VN1R74P-201ENST00000613259 503 ntBASIC1.89□□□□□ -2.11
POLR2JP52435 Y_RNA.783-201ENST00000613546 102 ntBASIC1.89□□□□□ -2.11
POLR2JP52435 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
POLR2JP52435 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
POLR2JP52435 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
POLR2JP52435 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
POLR2JP52435 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
POLR2JP52435 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC1.88□□□□□ -2.11
POLR2JP52435 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 154.1 ms