Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 AL645638.1-201ENST00000440519 361 ntBASIC2.15□□□□□ -2.07
SRP9P49458 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
SRP9P49458 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.15□□□□□ -2.07
SRP9P49458 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.15□□□□□ -2.07
SRP9P49458 AC108157.1-201ENST00000510511 539 ntBASIC2.15□□□□□ -2.07
SRP9P49458 AC112673.1-201ENST00000513168 575 ntBASIC2.15□□□□□ -2.07
SRP9P49458 SNORA31.8-201ENST00000516327 108 ntBASIC2.15□□□□□ -2.07
SRP9P49458 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.15□□□□□ -2.07
SRP9P49458 OR5AK3P-201ENST00000527486 1297 ntBASIC2.15□□□□□ -2.07
SRP9P49458 AP000867.2-201ENST00000532468 320 ntBASIC2.15□□□□□ -2.07
SRP9P49458 AC087241.2-201ENST00000535801 324 ntBASIC2.15□□□□□ -2.07
SRP9P49458 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.15□□□□□ -2.07
SRP9P49458 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
SRP9P49458 RPS3AP23-202ENST00000574601 686 ntBASIC2.15□□□□□ -2.07
SRP9P49458 MIR3162-201ENST00000581818 82 ntBASIC2.15□□□□□ -2.07
SRP9P49458 RPL23AP92-201ENST00000603609 255 ntBASIC2.15□□□□□ -2.07
SRP9P49458 AC006023.1-201ENST00000603944 259 ntBASIC2.15□□□□□ -2.07
SRP9P49458 AC026790.2-201ENST00000606282 430 ntBASIC2.15□□□□□ -2.07
SRP9P49458 AC106028.5-201ENST00000610332 395 ntBASIC2.15□□□□□ -2.07
SRP9P49458 MIR6840-201ENST00000611937 71 ntBASIC2.15□□□□□ -2.07
SRP9P49458 AL354950.1-201ENST00000614150 568 ntBASIC2.15□□□□□ -2.07
SRP9P49458 MIR6817-201ENST00000615588 66 ntBASIC2.15□□□□□ -2.07
SRP9P49458 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.15□□□□□ -2.07
SRP9P49458 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.15□□□□□ -2.07
SRP9P49458 CRYM-AS1-204ENST00000637983 556 ntBASIC2.15□□□□□ -2.07
SRP9P49458 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
SRP9P49458 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
SRP9P49458 AL136360.1-201ENST00000503377 1900 ntBASIC2.15□□□□□ -2.07
SRP9P49458 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
SRP9P49458 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.14□□□□□ -2.07
SRP9P49458 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
SRP9P49458 FTLP6-201ENST00000355274 422 ntBASIC2.14□□□□□ -2.07
SRP9P49458 MIR21-201ENST00000362134 72 ntBASIC2.14□□□□□ -2.07
SRP9P49458 RNA5SP68-201ENST00000363885 119 ntBASIC2.14□□□□□ -2.07
SRP9P49458 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.14□□□□□ -2.07
SRP9P49458 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC2.14□□□□□ -2.07
SRP9P49458 MRPS33P4-201ENST00000434892 317 ntBASIC2.14□□□□□ -2.07
SRP9P49458 AC023512.1-201ENST00000444513 499 ntBASIC2.14□□□□□ -2.07
SRP9P49458 IFNA11P-201ENST00000446352 526 ntBASIC2.14□□□□□ -2.07
SRP9P49458 CCNB1IP1P3-201ENST00000454702 829 ntBASIC2.14□□□□□ -2.07
SRP9P49458 RPL23AP45-201ENST00000476406 468 ntBASIC2.14□□□□□ -2.07
SRP9P49458 RPS4XP6-201ENST00000477670 797 ntBASIC2.14□□□□□ -2.07
SRP9P49458 FAM172BP-201ENST00000487497 1089 ntBASIC2.14□□□□□ -2.07
SRP9P49458 CCNHP1-201ENST00000513311 678 ntBASIC2.14□□□□□ -2.07
SRP9P49458 RN7SKP24-201ENST00000515888 284 ntBASIC2.14□□□□□ -2.07
SRP9P49458 HMGB1P46-201ENST00000520062 610 ntBASIC2.14□□□□□ -2.07
SRP9P49458 AC103783.1-201ENST00000520506 373 ntBASIC2.14□□□□□ -2.07
SRP9P49458 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.14□□□□□ -2.07
SRP9P49458 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC2.14□□□□□ -2.07
SRP9P49458 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC2.14□□□□□ -2.07
SRP9P49458 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.14□□□□□ -2.07
SRP9P49458 AC078814.3-201ENST00000553036 491 ntBASIC2.14□□□□□ -2.07
SRP9P49458 SERPINE4P-201ENST00000554978 281 ntBASIC2.14□□□□□ -2.07
SRP9P49458 RPL23AP84-201ENST00000571193 464 ntBASIC2.14□□□□□ -2.07
SRP9P49458 OR1M4P-201ENST00000589199 287 ntBASIC2.14□□□□□ -2.07
SRP9P49458 NRBF2P5-201ENST00000603087 788 ntBASIC2.14□□□□□ -2.07
SRP9P49458 XIAPP1-201ENST00000603162 600 ntBASIC2.14□□□□□ -2.07
SRP9P49458 MTCO3P22-201ENST00000603219 784 ntBASIC2.14□□□□□ -2.07
SRP9P49458 AP001330.4-201ENST00000604350 154 ntBASIC2.14□□□□□ -2.07
SRP9P49458 BNIP3P7-201ENST00000605641 516 ntBASIC2.14□□□□□ -2.07
SRP9P49458 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.14□□□□□ -2.07
SRP9P49458 AC245884.12-201ENST00000615364 59 ntBASIC2.14□□□□□ -2.07
SRP9P49458 ZNF720P1-201ENST00000562403 1939 ntBASIC2.14□□□□□ -2.07
SRP9P49458 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
SRP9P49458 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
SRP9P49458 AC012321.1-201ENST00000561622 1588 ntBASIC2.14□□□□□ -2.07
SRP9P49458 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.13□□□□□ -2.07
SRP9P49458 Y_RNA.111-201ENST00000363248 100 ntBASIC2.13□□□□□ -2.07
SRP9P49458 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
SRP9P49458 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.13□□□□□ -2.07
SRP9P49458 AL513331.1-201ENST00000411908 397 ntBASIC2.13□□□□□ -2.07
SRP9P49458 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.13□□□□□ -2.07
SRP9P49458 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.13□□□□□ -2.07
SRP9P49458 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC2.13□□□□□ -2.07
SRP9P49458 OR4K11P-201ENST00000431829 904 ntBASIC2.13□□□□□ -2.07
SRP9P49458 AL590762.3-201ENST00000436372 640 ntBASIC2.13□□□□□ -2.07
SRP9P49458 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.13□□□□□ -2.07
SRP9P49458 AL445687.1-201ENST00000439946 251 ntBASIC2.13□□□□□ -2.07
SRP9P49458 AL513328.1-201ENST00000446460 224 ntBASIC2.13□□□□□ -2.07
SRP9P49458 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC2.13□□□□□ -2.07
SRP9P49458 AC108938.1-201ENST00000451204 136 ntBASIC2.13□□□□□ -2.07
SRP9P49458 RPL31P50-201ENST00000471002 296 ntBASIC2.13□□□□□ -2.07
SRP9P49458 AC021087.2-201ENST00000504656 1203 ntBASIC2.13□□□□□ -2.07
SRP9P49458 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.13□□□□□ -2.07
SRP9P49458 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC2.13□□□□□ -2.07
SRP9P49458 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC2.13□□□□□ -2.07
SRP9P49458 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC2.13□□□□□ -2.07
SRP9P49458 AP003467.2-201ENST00000520175 319 ntBASIC2.13□□□□□ -2.07
SRP9P49458 RPS15AP11-201ENST00000594193 385 ntBASIC2.13□□□□□ -2.07
SRP9P49458 HSPE1P7-201ENST00000604681 321 ntBASIC2.13□□□□□ -2.07
SRP9P49458 HMGB1P51-201ENST00000605166 638 ntBASIC2.13□□□□□ -2.07
SRP9P49458 AL360181.4-201ENST00000621752 134 ntBASIC2.13□□□□□ -2.07
SRP9P49458 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
SRP9P49458 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
SRP9P49458 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
SRP9P49458 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
SRP9P49458 RNA5SP456-201ENST00000364002 114 ntBASIC2.12□□□□□ -2.07
SRP9P49458 RNU6-1243P-201ENST00000364028 107 ntBASIC2.12□□□□□ -2.07
SRP9P49458 RNU6-374P-201ENST00000364146 108 ntBASIC2.12□□□□□ -2.07
SRP9P49458 SNORA6-201ENST00000384033 151 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms