Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 CKS1BP3-201ENST00000600888 237 ntBASIC3.55□□□□□ -1.84
LHX1P48742 AC073657.2-201ENST00000605661 303 ntBASIC3.55□□□□□ -1.84
LHX1P48742 RNU6-88P-201ENST00000606801 100 ntBASIC3.55□□□□□ -1.84
LHX1P48742 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.55□□□□□ -1.84
LHX1P48742 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.55□□□□□ -1.84
LHX1P48742 AL445264.1-201ENST00000621719 171 ntBASIC3.55□□□□□ -1.84
LHX1P48742 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.55□□□□□ -1.84
LHX1P48742 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.55□□□□□ -1.84
LHX1P48742 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
LHX1P48742 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
LHX1P48742 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.55□□□□□ -1.84
LHX1P48742 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.54□□□□□ -1.84
LHX1P48742 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.54□□□□□ -1.84
LHX1P48742 AL133383.2-201ENST00000622958 2336 ntBASIC3.54□□□□□ -1.84
LHX1P48742 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.54□□□□□ -1.84
LHX1P48742 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
LHX1P48742 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.54□□□□□ -1.84
LHX1P48742 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
LHX1P48742 Y_RNA.333-201ENST00000365274 102 ntBASIC3.54□□□□□ -1.84
LHX1P48742 SNORD6-201ENST00000365444 73 ntBASIC3.54□□□□□ -1.84
LHX1P48742 RNU6-1181P-201ENST00000384191 106 ntBASIC3.54□□□□□ -1.84
LHX1P48742 MIR607-201ENST00000385241 96 ntBASIC3.54□□□□□ -1.84
LHX1P48742 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.54□□□□□ -1.84
LHX1P48742 CYCSP45-201ENST00000402289 315 ntBASIC3.54□□□□□ -1.84
LHX1P48742 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
LHX1P48742 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.54□□□□□ -1.84
LHX1P48742 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.54□□□□□ -1.84
LHX1P48742 RPL23AP82-202ENST00000427528 469 ntBASIC3.54□□□□□ -1.84
LHX1P48742 MTND5P25-201ENST00000430499 799 ntBASIC3.54□□□□□ -1.84
LHX1P48742 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC3.54□□□□□ -1.84
LHX1P48742 AL138799.3-201ENST00000438968 350 ntBASIC3.54□□□□□ -1.84
LHX1P48742 MTND5P14-201ENST00000441481 1267 ntBASIC3.54□□□□□ -1.84
LHX1P48742 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.54□□□□□ -1.84
LHX1P48742 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.54□□□□□ -1.84
LHX1P48742 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.54□□□□□ -1.84
LHX1P48742 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC3.54□□□□□ -1.84
LHX1P48742 CENPBD1P1-201ENST00000464061 469 ntBASIC3.54□□□□□ -1.84
LHX1P48742 AC010285.1-201ENST00000470580 392 ntBASIC3.54□□□□□ -1.84
LHX1P48742 RPL7P47-201ENST00000497299 556 ntBASIC3.54□□□□□ -1.84
LHX1P48742 AC021678.1-201ENST00000505195 936 ntBASIC3.54□□□□□ -1.84
LHX1P48742 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.54□□□□□ -1.84
LHX1P48742 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.54□□□□□ -1.84
LHX1P48742 NDUFB4P9-201ENST00000511646 388 ntBASIC3.54□□□□□ -1.84
LHX1P48742 SNORA31.20-201ENST00000517111 133 ntBASIC3.54□□□□□ -1.84
LHX1P48742 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC3.54□□□□□ -1.84
LHX1P48742 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.54□□□□□ -1.84
LHX1P48742 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
LHX1P48742 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
LHX1P48742 DUXAP5-201ENST00000529668 529 ntBASIC3.54□□□□□ -1.84
LHX1P48742 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC3.54□□□□□ -1.84
LHX1P48742 AC005476.1-201ENST00000554427 397 ntBASIC3.54□□□□□ -1.84
LHX1P48742 TGIF1P1-201ENST00000558095 802 ntBASIC3.54□□□□□ -1.84
LHX1P48742 AC012182.1-201ENST00000570133 895 ntBASIC3.54□□□□□ -1.84
LHX1P48742 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.54□□□□□ -1.84
LHX1P48742 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
LHX1P48742 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.54□□□□□ -1.84
LHX1P48742 VN1R92P-201ENST00000598511 928 ntBASIC3.54□□□□□ -1.84
LHX1P48742 AL353778.1-201ENST00000603149 408 ntBASIC3.54□□□□□ -1.84
LHX1P48742 AC012669.1-201ENST00000603209 283 ntBASIC3.54□□□□□ -1.84
LHX1P48742 AL139344.1-201ENST00000605228 195 ntBASIC3.54□□□□□ -1.84
LHX1P48742 AC091304.6-201ENST00000619761 202 ntBASIC3.54□□□□□ -1.84
LHX1P48742 SNORD39.4-201ENST00000620099 78 ntBASIC3.54□□□□□ -1.84
LHX1P48742 CRYM-AS1-204ENST00000637983 556 ntBASIC3.54□□□□□ -1.84
LHX1P48742 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
LHX1P48742 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
LHX1P48742 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
LHX1P48742 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
LHX1P48742 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
LHX1P48742 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.54□□□□□ -1.84
LHX1P48742 AC087359.1-201ENST00000508335 1740 ntBASIC3.53□□□□□ -1.84
LHX1P48742 AC004925.1-201ENST00000624256 2706 ntBASIC3.53□□□□□ -1.84
LHX1P48742 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.53□□□□□ -1.84
LHX1P48742 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.53□□□□□ -1.84
LHX1P48742 AL391994.1-201ENST00000254724 282 ntBASIC3.53□□□□□ -1.84
LHX1P48742 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
LHX1P48742 SNORA31-201ENST00000362607 130 ntBASIC3.53□□□□□ -1.84
LHX1P48742 RNU6-462P-201ENST00000362659 105 ntBASIC3.53□□□□□ -1.84
LHX1P48742 AL590084.2-201ENST00000401481 382 ntBASIC3.53□□□□□ -1.84
LHX1P48742 AL356968.1-201ENST00000416622 474 ntBASIC3.53□□□□□ -1.84
LHX1P48742 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.53□□□□□ -1.84
LHX1P48742 MTCYBP45-201ENST00000435243 565 ntBASIC3.53□□□□□ -1.84
LHX1P48742 ATP5C1P1-201ENST00000441945 895 ntBASIC3.53□□□□□ -1.84
LHX1P48742 MTCYBP3-201ENST00000445588 1137 ntBASIC3.53□□□□□ -1.84
LHX1P48742 AC002381.1-201ENST00000447049 280 ntBASIC3.53□□□□□ -1.84
LHX1P48742 LINC00888-204ENST00000487386 421 ntBASIC3.53□□□□□ -1.84
LHX1P48742 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.53□□□□□ -1.84
LHX1P48742 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.53□□□□□ -1.84
LHX1P48742 HSPE1P23-201ENST00000509838 286 ntBASIC3.53□□□□□ -1.84
LHX1P48742 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.53□□□□□ -1.84
LHX1P48742 RNU2-58P-201ENST00000516403 183 ntBASIC3.53□□□□□ -1.84
LHX1P48742 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
LHX1P48742 COX6CP8-201ENST00000522620 226 ntBASIC3.53□□□□□ -1.84
LHX1P48742 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC3.53□□□□□ -1.84
LHX1P48742 AC109635.4-202ENST00000531666 412 ntBASIC3.53□□□□□ -1.84
LHX1P48742 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.53□□□□□ -1.84
LHX1P48742 SETP7-201ENST00000552169 453 ntBASIC3.53□□□□□ -1.84
LHX1P48742 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.53□□□□□ -1.84
LHX1P48742 ISCA1P3-201ENST00000577104 373 ntBASIC3.53□□□□□ -1.84
LHX1P48742 AC090615.1-201ENST00000577519 154 ntBASIC3.53□□□□□ -1.84
LHX1P48742 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms