Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 AC140076.1-201ENST00000449897 361 ntBASIC3.3□□□□□ -1.88
BRCC3P46736 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.3□□□□□ -1.88
BRCC3P46736 HMGN1P18-201ENST00000457642 277 ntBASIC3.3□□□□□ -1.88
BRCC3P46736 AL139824.2-201ENST00000458731 1095 ntBASIC3.3□□□□□ -1.88
BRCC3P46736 PABPC1P3-201ENST00000469174 459 ntBASIC3.3□□□□□ -1.88
BRCC3P46736 AP002884.2-201ENST00000471647 395 ntBASIC3.3□□□□□ -1.88
BRCC3P46736 AC010301.1-201ENST00000473936 355 ntBASIC3.3□□□□□ -1.88
BRCC3P46736 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
BRCC3P46736 RPS4XP22-201ENST00000480755 780 ntBASIC3.3□□□□□ -1.88
BRCC3P46736 AC108734.3-201ENST00000481241 1165 ntBASIC3.3□□□□□ -1.88
BRCC3P46736 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.3□□□□□ -1.88
BRCC3P46736 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.3□□□□□ -1.88
BRCC3P46736 HMGB3P15-201ENST00000507326 574 ntBASIC3.3□□□□□ -1.88
BRCC3P46736 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.3□□□□□ -1.88
BRCC3P46736 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.3□□□□□ -1.88
BRCC3P46736 RNU6-1225P-201ENST00000516336 65 ntBASIC3.3□□□□□ -1.88
BRCC3P46736 OR5D17P-201ENST00000531492 978 ntBASIC3.3□□□□□ -1.88
BRCC3P46736 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC3.3□□□□□ -1.88
BRCC3P46736 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.3□□□□□ -1.88
BRCC3P46736 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.3□□□□□ -1.88
BRCC3P46736 AC090888.2-201ENST00000559765 1144 ntBASIC3.3□□□□□ -1.88
BRCC3P46736 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC3.3□□□□□ -1.88
BRCC3P46736 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.3□□□□□ -1.88
BRCC3P46736 DUXAP3-201ENST00000603616 594 ntBASIC3.3□□□□□ -1.88
BRCC3P46736 BNIP3P11-201ENST00000603878 563 ntBASIC3.3□□□□□ -1.88
BRCC3P46736 Z99289.3-201ENST00000605586 594 ntBASIC3.3□□□□□ -1.88
BRCC3P46736 AC007349.4-201ENST00000608114 532 ntBASIC3.3□□□□□ -1.88
BRCC3P46736 AC092954.1-201ENST00000609121 445 ntBASIC3.3□□□□□ -1.88
BRCC3P46736 AC090116.1-201ENST00000615679 446 ntBASIC3.3□□□□□ -1.88
BRCC3P46736 AC008147.4-201ENST00000617570 1204 ntBASIC3.3□□□□□ -1.88
BRCC3P46736 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.3□□□□□ -1.88
BRCC3P46736 AL355493.4-201ENST00000618530 292 ntBASIC3.3□□□□□ -1.88
BRCC3P46736 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.3□□□□□ -1.88
BRCC3P46736 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.3□□□□□ -1.88
BRCC3P46736 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
BRCC3P46736 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
BRCC3P46736 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
BRCC3P46736 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.29□□□□□ -1.88
BRCC3P46736 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.29□□□□□ -1.88
BRCC3P46736 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
BRCC3P46736 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
BRCC3P46736 MIR22-201ENST00000362190 85 ntBASIC3.29□□□□□ -1.88
BRCC3P46736 Y_RNA.111-201ENST00000363248 100 ntBASIC3.29□□□□□ -1.88
BRCC3P46736 SNORA51.6-201ENST00000384151 125 ntBASIC3.29□□□□□ -1.88
BRCC3P46736 MIR607-201ENST00000385241 96 ntBASIC3.29□□□□□ -1.88
BRCC3P46736 U3.26-201ENST00000391236 204 ntBASIC3.29□□□□□ -1.88
BRCC3P46736 AC110754.1-201ENST00000399740 601 ntBASIC3.29□□□□□ -1.88
BRCC3P46736 AL008987.1-201ENST00000415528 237 ntBASIC3.29□□□□□ -1.88
BRCC3P46736 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.29□□□□□ -1.88
BRCC3P46736 MRPS36P1-201ENST00000421291 307 ntBASIC3.29□□□□□ -1.88
BRCC3P46736 GLRXP1-201ENST00000423261 334 ntBASIC3.29□□□□□ -1.88
BRCC3P46736 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.29□□□□□ -1.88
BRCC3P46736 ATP5F1P1-201ENST00000433775 569 ntBASIC3.29□□□□□ -1.88
BRCC3P46736 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.29□□□□□ -1.88
BRCC3P46736 AL591719.1-201ENST00000444669 744 ntBASIC3.29□□□□□ -1.88
BRCC3P46736 MTCO1P48-201ENST00000448024 1096 ntBASIC3.29□□□□□ -1.88
BRCC3P46736 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC3.29□□□□□ -1.88
BRCC3P46736 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.29□□□□□ -1.88
BRCC3P46736 PNPLA4P1-201ENST00000458328 305 ntBASIC3.29□□□□□ -1.88
BRCC3P46736 AC092754.2-201ENST00000463506 460 ntBASIC3.29□□□□□ -1.88
BRCC3P46736 AC010401.1-201ENST00000463867 348 ntBASIC3.29□□□□□ -1.88
BRCC3P46736 AC096576.1-201ENST00000489014 359 ntBASIC3.29□□□□□ -1.88
BRCC3P46736 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC3.29□□□□□ -1.88
BRCC3P46736 AC021146.5-201ENST00000503544 545 ntBASIC3.29□□□□□ -1.88
BRCC3P46736 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC3.29□□□□□ -1.88
BRCC3P46736 AC021146.8-201ENST00000507455 733 ntBASIC3.29□□□□□ -1.88
BRCC3P46736 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC3.29□□□□□ -1.88
BRCC3P46736 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.29□□□□□ -1.88
BRCC3P46736 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC3.29□□□□□ -1.88
BRCC3P46736 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.29□□□□□ -1.88
BRCC3P46736 AC005832.3-201ENST00000537929 631 ntBASIC3.29□□□□□ -1.88
BRCC3P46736 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.29□□□□□ -1.88
BRCC3P46736 AC090502.2-201ENST00000549267 280 ntBASIC3.29□□□□□ -1.88
BRCC3P46736 AC010198.2-201ENST00000550612 259 ntBASIC3.29□□□□□ -1.88
BRCC3P46736 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC3.29□□□□□ -1.88
BRCC3P46736 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.29□□□□□ -1.88
BRCC3P46736 AC091946.2-201ENST00000606105 291 ntBASIC3.29□□□□□ -1.88
BRCC3P46736 AL137790.1-201ENST00000634283 177 ntBASIC3.29□□□□□ -1.88
BRCC3P46736 MKKS-204ENST00000639674 192 ntBASIC3.29□□□□□ -1.88
BRCC3P46736 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
BRCC3P46736 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.29□□□□□ -1.88
BRCC3P46736 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
BRCC3P46736 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
BRCC3P46736 SNORA80A-201ENST00000363922 136 ntBASIC3.28□□□□□ -1.88
BRCC3P46736 RNU6-560P-201ENST00000364007 108 ntBASIC3.28□□□□□ -1.88
BRCC3P46736 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
BRCC3P46736 AL583834.1-201ENST00000406943 343 ntBASIC3.28□□□□□ -1.88
BRCC3P46736 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC3.28□□□□□ -1.88
BRCC3P46736 FNDC3CP-201ENST00000420795 1155 ntBASIC3.28□□□□□ -1.88
BRCC3P46736 MTCO3P1-205ENST00000422088 832 ntBASIC3.28□□□□□ -1.88
BRCC3P46736 AC025750.2-201ENST00000442609 450 ntBASIC3.28□□□□□ -1.88
BRCC3P46736 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC3.28□□□□□ -1.88
BRCC3P46736 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.28□□□□□ -1.88
BRCC3P46736 RN7SL442P-201ENST00000473804 320 ntBASIC3.28□□□□□ -1.88
BRCC3P46736 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.28□□□□□ -1.88
BRCC3P46736 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.28□□□□□ -1.88
BRCC3P46736 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
BRCC3P46736 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.28□□□□□ -1.88
BRCC3P46736 AC012182.1-201ENST00000570133 895 ntBASIC3.28□□□□□ -1.88
BRCC3P46736 BNIP3P26-201ENST00000600827 554 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms