Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 AC092447.6-201ENST00000414578 210 ntBASIC2.86□□□□□ -1.95
TNFSF9P41273 TMSB4XP6-201ENST00000415187 135 ntBASIC2.86□□□□□ -1.95
TNFSF9P41273 TAF13P2-201ENST00000416876 286 ntBASIC2.86□□□□□ -1.95
TNFSF9P41273 TMSB4XP1-201ENST00000424567 135 ntBASIC2.86□□□□□ -1.95
TNFSF9P41273 AC012497.1-201ENST00000429392 575 ntBASIC2.86□□□□□ -1.95
TNFSF9P41273 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.86□□□□□ -1.95
TNFSF9P41273 CACYBPP2-201ENST00000453625 678 ntBASIC2.86□□□□□ -1.95
TNFSF9P41273 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC2.86□□□□□ -1.95
TNFSF9P41273 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.86□□□□□ -1.95
TNFSF9P41273 AC126389.1-201ENST00000477436 290 ntBASIC2.86□□□□□ -1.95
TNFSF9P41273 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
TNFSF9P41273 AC118282.2-201ENST00000508739 374 ntBASIC2.86□□□□□ -1.95
TNFSF9P41273 SNORA31.8-201ENST00000516327 108 ntBASIC2.86□□□□□ -1.95
TNFSF9P41273 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.86□□□□□ -1.95
TNFSF9P41273 AC005951.1-201ENST00000576706 485 ntBASIC2.86□□□□□ -1.95
TNFSF9P41273 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC2.86□□□□□ -1.95
TNFSF9P41273 AC012669.1-201ENST00000603209 283 ntBASIC2.86□□□□□ -1.95
TNFSF9P41273 AC090897.3-201ENST00000636973 1157 ntBASIC2.86□□□□□ -1.95
TNFSF9P41273 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
TNFSF9P41273 SGO1P2-201ENST00000429458 1589 ntBASIC2.86□□□□□ -1.95
TNFSF9P41273 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC2.86□□□□□ -1.95
TNFSF9P41273 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
TNFSF9P41273 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
TNFSF9P41273 AL079305.1-201ENST00000623159 3008 ntBASIC2.85□□□□□ -1.95
TNFSF9P41273 RNU4-82P-201ENST00000362443 140 ntBASIC2.85□□□□□ -1.95
TNFSF9P41273 RNU6-353P-201ENST00000364266 108 ntBASIC2.85□□□□□ -1.95
TNFSF9P41273 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
TNFSF9P41273 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC2.85□□□□□ -1.95
TNFSF9P41273 U6.112-201ENST00000384129 70 ntBASIC2.85□□□□□ -1.95
TNFSF9P41273 PTGES3P2-201ENST00000407942 482 ntBASIC2.85□□□□□ -1.95
TNFSF9P41273 AL133384.1-201ENST00000412744 351 ntBASIC2.85□□□□□ -1.95
TNFSF9P41273 HSPE1P1-201ENST00000421494 318 ntBASIC2.85□□□□□ -1.95
TNFSF9P41273 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.85□□□□□ -1.95
TNFSF9P41273 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC2.85□□□□□ -1.95
TNFSF9P41273 RPL31P54-201ENST00000429803 370 ntBASIC2.85□□□□□ -1.95
TNFSF9P41273 AC005345.1-201ENST00000431868 217 ntBASIC2.85□□□□□ -1.95
TNFSF9P41273 RPL17P35-201ENST00000432217 549 ntBASIC2.85□□□□□ -1.95
TNFSF9P41273 TRIM60P18-201ENST00000441518 828 ntBASIC2.85□□□□□ -1.95
TNFSF9P41273 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.85□□□□□ -1.95
TNFSF9P41273 AP002884.2-201ENST00000471647 395 ntBASIC2.85□□□□□ -1.95
TNFSF9P41273 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.85□□□□□ -1.95
TNFSF9P41273 AC084024.2-201ENST00000503480 791 ntBASIC2.85□□□□□ -1.95
TNFSF9P41273 AC006445.2-201ENST00000510061 472 ntBASIC2.85□□□□□ -1.95
TNFSF9P41273 AC121161.1-201ENST00000510606 652 ntBASIC2.85□□□□□ -1.95
TNFSF9P41273 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
TNFSF9P41273 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
TNFSF9P41273 AC100870.1-201ENST00000522035 505 ntBASIC2.85□□□□□ -1.95
TNFSF9P41273 ERHP1-201ENST00000523006 310 ntBASIC2.85□□□□□ -1.95
TNFSF9P41273 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
TNFSF9P41273 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
TNFSF9P41273 AC090666.1-201ENST00000578241 445 ntBASIC2.85□□□□□ -1.95
TNFSF9P41273 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.85□□□□□ -1.95
TNFSF9P41273 BDH2P1-201ENST00000602288 736 ntBASIC2.85□□□□□ -1.95
TNFSF9P41273 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.85□□□□□ -1.95
TNFSF9P41273 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC2.85□□□□□ -1.95
TNFSF9P41273 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.85□□□□□ -1.95
TNFSF9P41273 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
TNFSF9P41273 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
TNFSF9P41273 FAM35BP-202ENST00000497389 3337 ntBASIC2.85□□□□□ -1.95
TNFSF9P41273 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.84□□□□□ -1.95
TNFSF9P41273 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
TNFSF9P41273 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
TNFSF9P41273 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
TNFSF9P41273 RNU6-582P-201ENST00000362989 107 ntBASIC2.84□□□□□ -1.95
TNFSF9P41273 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
TNFSF9P41273 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
TNFSF9P41273 AL139039.1-201ENST00000401900 692 ntBASIC2.84□□□□□ -1.95
TNFSF9P41273 AL139098.1-201ENST00000407291 389 ntBASIC2.84□□□□□ -1.95
TNFSF9P41273 BMS1P22-201ENST00000414726 313 ntBASIC2.84□□□□□ -1.95
TNFSF9P41273 FCF1P2-201ENST00000415284 583 ntBASIC2.84□□□□□ -1.95
TNFSF9P41273 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC2.84□□□□□ -1.95
TNFSF9P41273 OR2B8P-201ENST00000432841 938 ntBASIC2.84□□□□□ -1.95
TNFSF9P41273 SNRPEP4-201ENST00000435815 279 ntBASIC2.84□□□□□ -1.95
TNFSF9P41273 RPL36AP33-201ENST00000450395 310 ntBASIC2.84□□□□□ -1.95
TNFSF9P41273 AL445669.2-201ENST00000454425 421 ntBASIC2.84□□□□□ -1.95
TNFSF9P41273 SRIP1-201ENST00000489235 288 ntBASIC2.84□□□□□ -1.95
TNFSF9P41273 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.84□□□□□ -1.95
TNFSF9P41273 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.84□□□□□ -1.95
TNFSF9P41273 AC114781.4-201ENST00000513707 639 ntBASIC2.84□□□□□ -1.95
TNFSF9P41273 AC096725.1-201ENST00000514266 313 ntBASIC2.84□□□□□ -1.95
TNFSF9P41273 RNU4-29P-201ENST00000515943 174 ntBASIC2.84□□□□□ -1.95
TNFSF9P41273 RNU6-885P-201ENST00000516607 104 ntBASIC2.84□□□□□ -1.95
TNFSF9P41273 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
TNFSF9P41273 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.84□□□□□ -1.95
TNFSF9P41273 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.84□□□□□ -1.95
TNFSF9P41273 AL355836.1-201ENST00000555951 870 ntBASIC2.84□□□□□ -1.95
TNFSF9P41273 FAM60BP-201ENST00000578364 658 ntBASIC2.84□□□□□ -1.95
TNFSF9P41273 AP002906.1-201ENST00000603405 233 ntBASIC2.84□□□□□ -1.95
TNFSF9P41273 AC002487.1-201ENST00000604565 994 ntBASIC2.84□□□□□ -1.95
TNFSF9P41273 AC116312.1-201ENST00000606841 314 ntBASIC2.84□□□□□ -1.95
TNFSF9P41273 AC002076.2-201ENST00000617362 122 ntBASIC2.84□□□□□ -1.95
TNFSF9P41273 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC2.84□□□□□ -1.95
TNFSF9P41273 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
TNFSF9P41273 NUP58P1-201ENST00000502546 1738 ntBASIC2.84□□□□□ -1.96
TNFSF9P41273 AP002907.1-201ENST00000606361 1430 ntBASIC2.84□□□□□ -1.96
TNFSF9P41273 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.84□□□□□ -1.96
TNFSF9P41273 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
TNFSF9P41273 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.83□□□□□ -1.96
TNFSF9P41273 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.83□□□□□ -1.96
TNFSF9P41273 SNORD62.1-201ENST00000362541 86 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms