Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 UBE2V1P2-201ENST00000397758 440 ntBASIC5.37□□□□□ -1.55
GRIK1P39086 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.37□□□□□ -1.55
GRIK1P39086 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC5.37□□□□□ -1.55
GRIK1P39086 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.37□□□□□ -1.55
GRIK1P39086 AC009238.2-201ENST00000431026 355 ntBASIC5.37□□□□□ -1.55
GRIK1P39086 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.37□□□□□ -1.55
GRIK1P39086 RPS20P5-201ENST00000434808 360 ntBASIC5.37□□□□□ -1.55
GRIK1P39086 AL353597.2-202ENST00000434901 373 ntBASIC5.37□□□□□ -1.55
GRIK1P39086 RHOT1P3-201ENST00000436571 331 ntBASIC5.37□□□□□ -1.55
GRIK1P39086 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.37□□□□□ -1.55
GRIK1P39086 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC5.37□□□□□ -1.55
GRIK1P39086 DYNLT3P2-201ENST00000442517 295 ntBASIC5.37□□□□□ -1.55
GRIK1P39086 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.37□□□□□ -1.55
GRIK1P39086 RNU6-1132P-201ENST00000459214 107 ntBASIC5.37□□□□□ -1.55
GRIK1P39086 AL049714.1-201ENST00000466686 347 ntBASIC5.37□□□□□ -1.55
GRIK1P39086 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.37□□□□□ -1.55
GRIK1P39086 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.37□□□□□ -1.55
GRIK1P39086 RNU6-699P-201ENST00000517081 110 ntBASIC5.37□□□□□ -1.55
GRIK1P39086 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
GRIK1P39086 AP001922.4-201ENST00000526967 290 ntBASIC5.37□□□□□ -1.55
GRIK1P39086 AP000857.1-201ENST00000532151 543 ntBASIC5.37□□□□□ -1.55
GRIK1P39086 AP000763.2-201ENST00000540641 163 ntBASIC5.37□□□□□ -1.55
GRIK1P39086 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.37□□□□□ -1.55
GRIK1P39086 AC128657.1-201ENST00000549459 145 ntBASIC5.37□□□□□ -1.55
GRIK1P39086 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC5.37□□□□□ -1.55
GRIK1P39086 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.37□□□□□ -1.55
GRIK1P39086 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.37□□□□□ -1.55
GRIK1P39086 SNORD39.3-201ENST00000584451 71 ntBASIC5.37□□□□□ -1.55
GRIK1P39086 GLUD1P4-201ENST00000590914 418 ntBASIC5.37□□□□□ -1.55
GRIK1P39086 AC011487.3-201ENST00000593607 453 ntBASIC5.37□□□□□ -1.55
GRIK1P39086 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.37□□□□□ -1.55
GRIK1P39086 AC078899.3-201ENST00000599065 212 ntBASIC5.37□□□□□ -1.55
GRIK1P39086 BBIP1P1-201ENST00000602999 279 ntBASIC5.37□□□□□ -1.55
GRIK1P39086 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC5.37□□□□□ -1.55
GRIK1P39086 AL354984.3-201ENST00000604803 325 ntBASIC5.37□□□□□ -1.55
GRIK1P39086 AC010201.1-201ENST00000605051 540 ntBASIC5.37□□□□□ -1.55
GRIK1P39086 OR6R2P-201ENST00000609216 300 ntBASIC5.37□□□□□ -1.55
GRIK1P39086 AL049539.1-201ENST00000611964 459 ntBASIC5.37□□□□□ -1.55
GRIK1P39086 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.37□□□□□ -1.55
GRIK1P39086 AC133104.2-201ENST00000615272 193 ntBASIC5.37□□□□□ -1.55
GRIK1P39086 MIR8062-201ENST00000621515 85 ntBASIC5.37□□□□□ -1.55
GRIK1P39086 AC243312.2-201ENST00000623340 601 ntBASIC5.37□□□□□ -1.55
GRIK1P39086 AP001784.1-201ENST00000624107 428 ntBASIC5.37□□□□□ -1.55
GRIK1P39086 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.37□□□□□ -1.55
GRIK1P39086 INTS6P1-201ENST00000504674 2530 ntBASIC5.37□□□□□ -1.55
GRIK1P39086 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
GRIK1P39086 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
GRIK1P39086 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
GRIK1P39086 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.37□□□□□ -1.55
GRIK1P39086 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.37□□□□□ -1.55
GRIK1P39086 AL450326.2-201ENST00000421913 1962 ntBASIC5.36□□□□□ -1.55
GRIK1P39086 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
GRIK1P39086 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
GRIK1P39086 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
GRIK1P39086 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
GRIK1P39086 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
GRIK1P39086 RN7SKP104-201ENST00000362605 328 ntBASIC5.36□□□□□ -1.55
GRIK1P39086 RN7SKP103-201ENST00000363848 320 ntBASIC5.36□□□□□ -1.55
GRIK1P39086 RNA5SP428-201ENST00000365129 132 ntBASIC5.36□□□□□ -1.55
GRIK1P39086 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
GRIK1P39086 SNORA2.3-201ENST00000383920 135 ntBASIC5.36□□□□□ -1.55
GRIK1P39086 SNORA51.8-201ENST00000384234 132 ntBASIC5.36□□□□□ -1.55
GRIK1P39086 RNU6-441P-201ENST00000384545 106 ntBASIC5.36□□□□□ -1.55
GRIK1P39086 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
GRIK1P39086 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
GRIK1P39086 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.36□□□□□ -1.55
GRIK1P39086 EIF4EP1-201ENST00000422311 642 ntBASIC5.36□□□□□ -1.55
GRIK1P39086 RPL21P91-201ENST00000429231 479 ntBASIC5.36□□□□□ -1.55
GRIK1P39086 YWHAZP8-201ENST00000436935 731 ntBASIC5.36□□□□□ -1.55
GRIK1P39086 AF228730.2-201ENST00000438784 848 ntBASIC5.36□□□□□ -1.55
GRIK1P39086 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.36□□□□□ -1.55
GRIK1P39086 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC5.36□□□□□ -1.55
GRIK1P39086 MTND1P17-201ENST00000448961 204 ntBASIC5.36□□□□□ -1.55
GRIK1P39086 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC5.36□□□□□ -1.55
GRIK1P39086 AL118520.1-201ENST00000450770 291 ntBASIC5.36□□□□□ -1.55
GRIK1P39086 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC5.36□□□□□ -1.55
GRIK1P39086 MTCO3P2-201ENST00000457365 171 ntBASIC5.36□□□□□ -1.55
GRIK1P39086 RNU7-180P-201ENST00000459240 63 ntBASIC5.36□□□□□ -1.55
GRIK1P39086 AC091180.1-201ENST00000462104 372 ntBASIC5.36□□□□□ -1.55
GRIK1P39086 AC126389.1-201ENST00000477436 290 ntBASIC5.36□□□□□ -1.55
GRIK1P39086 ALDH7A1P3-201ENST00000492517 345 ntBASIC5.36□□□□□ -1.55
GRIK1P39086 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC5.36□□□□□ -1.55
GRIK1P39086 FTH1P24-201ENST00000503502 462 ntBASIC5.36□□□□□ -1.55
GRIK1P39086 RNU6-138P-201ENST00000515952 107 ntBASIC5.36□□□□□ -1.55
GRIK1P39086 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC5.36□□□□□ -1.55
GRIK1P39086 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.36□□□□□ -1.55
GRIK1P39086 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC5.36□□□□□ -1.55
GRIK1P39086 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC5.36□□□□□ -1.55
GRIK1P39086 HMGB3P26-201ENST00000560051 582 ntBASIC5.36□□□□□ -1.55
GRIK1P39086 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC5.36□□□□□ -1.55
GRIK1P39086 MIR5186-201ENST00000577504 120 ntBASIC5.36□□□□□ -1.55
GRIK1P39086 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.36□□□□□ -1.55
GRIK1P39086 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC5.36□□□□□ -1.55
GRIK1P39086 AC104662.1-201ENST00000604448 511 ntBASIC5.36□□□□□ -1.55
GRIK1P39086 AP005432.2-201ENST00000608162 586 ntBASIC5.36□□□□□ -1.55
GRIK1P39086 Z82243.1-201ENST00000609432 473 ntBASIC5.36□□□□□ -1.55
GRIK1P39086 AC011890.2-201ENST00000613393 294 ntBASIC5.36□□□□□ -1.55
GRIK1P39086 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
GRIK1P39086 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
GRIK1P39086 AC005592.1-201ENST00000566527 1640 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms