Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC4.48□□□□□ -1.69
COL15A1P39059 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC4.48□□□□□ -1.69
COL15A1P39059 RNA5SP269-201ENST00000459032 137 ntBASIC4.48□□□□□ -1.69
COL15A1P39059 AL136126.1-201ENST00000473603 402 ntBASIC4.48□□□□□ -1.69
COL15A1P39059 TMEM251P1-201ENST00000503717 318 ntBASIC4.48□□□□□ -1.69
COL15A1P39059 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.48□□□□□ -1.69
COL15A1P39059 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.48□□□□□ -1.69
COL15A1P39059 CBX3P3-201ENST00000508108 532 ntBASIC4.48□□□□□ -1.69
COL15A1P39059 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC4.48□□□□□ -1.69
COL15A1P39059 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC4.48□□□□□ -1.69
COL15A1P39059 MTCO2P32-201ENST00000514865 403 ntBASIC4.48□□□□□ -1.69
COL15A1P39059 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC4.48□□□□□ -1.69
COL15A1P39059 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC4.48□□□□□ -1.69
COL15A1P39059 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC4.48□□□□□ -1.69
COL15A1P39059 LARP7P2-201ENST00000575306 125 ntBASIC4.48□□□□□ -1.69
COL15A1P39059 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC4.48□□□□□ -1.69
COL15A1P39059 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC4.48□□□□□ -1.69
COL15A1P39059 AC011816.2-201ENST00000607089 556 ntBASIC4.48□□□□□ -1.69
COL15A1P39059 DLEU1_2.1-201ENST00000617920 342 ntBASIC4.48□□□□□ -1.69
COL15A1P39059 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.48□□□□□ -1.69
COL15A1P39059 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC4.48□□□□□ -1.69
COL15A1P39059 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.48□□□□□ -1.69
COL15A1P39059 AC090229.1-201ENST00000590983 1609 ntBASIC4.47□□□□□ -1.69
COL15A1P39059 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
COL15A1P39059 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
COL15A1P39059 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
COL15A1P39059 MTND4P4-201ENST00000439033 1366 ntBASIC4.47□□□□□ -1.69
COL15A1P39059 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.47□□□□□ -1.69
COL15A1P39059 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
COL15A1P39059 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.47□□□□□ -1.69
COL15A1P39059 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
COL15A1P39059 RNU4-91P-201ENST00000364778 135 ntBASIC4.47□□□□□ -1.69
COL15A1P39059 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
COL15A1P39059 Y_RNA.505-201ENST00000384489 102 ntBASIC4.47□□□□□ -1.69
COL15A1P39059 SNORA48.5-201ENST00000391143 135 ntBASIC4.47□□□□□ -1.69
COL15A1P39059 RNU6-192P-201ENST00000391253 100 ntBASIC4.47□□□□□ -1.69
COL15A1P39059 HMGB1P17-201ENST00000403495 628 ntBASIC4.47□□□□□ -1.69
COL15A1P39059 RPL17P12-201ENST00000413391 526 ntBASIC4.47□□□□□ -1.69
COL15A1P39059 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.47□□□□□ -1.69
COL15A1P39059 AC017079.2-201ENST00000416102 485 ntBASIC4.47□□□□□ -1.69
COL15A1P39059 RPS27AP14-201ENST00000422868 454 ntBASIC4.47□□□□□ -1.69
COL15A1P39059 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC4.47□□□□□ -1.69
COL15A1P39059 RPL23AP74-201ENST00000437246 471 ntBASIC4.47□□□□□ -1.69
COL15A1P39059 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.47□□□□□ -1.69
COL15A1P39059 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.47□□□□□ -1.69
COL15A1P39059 ELOCP30-201ENST00000447108 299 ntBASIC4.47□□□□□ -1.69
COL15A1P39059 ARPC3P5-201ENST00000448802 534 ntBASIC4.47□□□□□ -1.69
COL15A1P39059 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.47□□□□□ -1.69
COL15A1P39059 RNU7-136P-201ENST00000458819 69 ntBASIC4.47□□□□□ -1.69
COL15A1P39059 AL049873.1-201ENST00000480540 376 ntBASIC4.47□□□□□ -1.69
COL15A1P39059 PHBP14-201ENST00000512887 367 ntBASIC4.47□□□□□ -1.69
COL15A1P39059 PTP4A1P6-201ENST00000531034 478 ntBASIC4.47□□□□□ -1.69
COL15A1P39059 AC068587.4-201ENST00000533893 186 ntBASIC4.47□□□□□ -1.69
COL15A1P39059 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.47□□□□□ -1.69
COL15A1P39059 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.47□□□□□ -1.69
COL15A1P39059 MIR4325-201ENST00000583049 90 ntBASIC4.47□□□□□ -1.69
COL15A1P39059 AC083760.1-201ENST00000589621 670 ntBASIC4.47□□□□□ -1.69
COL15A1P39059 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.47□□□□□ -1.69
COL15A1P39059 PRELID3BP8-201ENST00000604148 295 ntBASIC4.47□□□□□ -1.69
COL15A1P39059 AC010680.3-201ENST00000604215 520 ntBASIC4.47□□□□□ -1.69
COL15A1P39059 BRDTP1-201ENST00000605735 677 ntBASIC4.47□□□□□ -1.69
COL15A1P39059 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC4.47□□□□□ -1.69
COL15A1P39059 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
COL15A1P39059 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.47□□□□□ -1.69
COL15A1P39059 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
COL15A1P39059 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
COL15A1P39059 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
COL15A1P39059 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.46□□□□□ -1.7
COL15A1P39059 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.46□□□□□ -1.7
COL15A1P39059 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
COL15A1P39059 GNG5P1-201ENST00000255500 204 ntBASIC4.46□□□□□ -1.7
COL15A1P39059 OR10J6P-201ENST00000289731 930 ntBASIC4.46□□□□□ -1.7
COL15A1P39059 FRG1CP-201ENST00000358464 769 ntBASIC4.46□□□□□ -1.7
COL15A1P39059 RNA5SP322-201ENST00000363617 119 ntBASIC4.46□□□□□ -1.7
COL15A1P39059 RNU6-283P-201ENST00000364788 107 ntBASIC4.46□□□□□ -1.7
COL15A1P39059 ARF4P3-201ENST00000397387 509 ntBASIC4.46□□□□□ -1.7
COL15A1P39059 HSPE1P8-201ENST00000406997 288 ntBASIC4.46□□□□□ -1.7
COL15A1P39059 RNU6-648P-201ENST00000410190 107 ntBASIC4.46□□□□□ -1.7
COL15A1P39059 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.46□□□□□ -1.7
COL15A1P39059 RPS15AP40-201ENST00000419621 391 ntBASIC4.46□□□□□ -1.7
COL15A1P39059 USP9YP29-201ENST00000445112 563 ntBASIC4.46□□□□□ -1.7
COL15A1P39059 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC4.46□□□□□ -1.7
COL15A1P39059 RN7SL594P-201ENST00000470590 287 ntBASIC4.46□□□□□ -1.7
COL15A1P39059 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC4.46□□□□□ -1.7
COL15A1P39059 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC4.46□□□□□ -1.7
COL15A1P39059 AC093809.1-201ENST00000509155 340 ntBASIC4.46□□□□□ -1.7
COL15A1P39059 AC079140.3-201ENST00000511111 550 ntBASIC4.46□□□□□ -1.7
COL15A1P39059 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.46□□□□□ -1.7
COL15A1P39059 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.46□□□□□ -1.7
COL15A1P39059 AC104986.1-201ENST00000517978 436 ntBASIC4.46□□□□□ -1.7
COL15A1P39059 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.46□□□□□ -1.7
COL15A1P39059 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
COL15A1P39059 AC013828.2-201ENST00000532487 235 ntBASIC4.46□□□□□ -1.7
COL15A1P39059 OR6C7P-201ENST00000547875 934 ntBASIC4.46□□□□□ -1.7
COL15A1P39059 AC079089.3-201ENST00000603094 673 ntBASIC4.46□□□□□ -1.7
COL15A1P39059 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.46□□□□□ -1.7
COL15A1P39059 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
COL15A1P39059 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
COL15A1P39059 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
COL15A1P39059 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms