Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 MIR6721-201ENST00000617181 87 ntBASIC6.46□□□□□ -1.38
CLCN1P35523 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CLCN1P35523 AC111152.1-202ENST00000635848 339 ntBASIC6.46□□□□□ -1.38
CLCN1P35523 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CLCN1P35523 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC6.46□□□□□ -1.38
CLCN1P35523 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC6.46□□□□□ -1.38
CLCN1P35523 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CLCN1P35523 RBMY1HP-201ENST00000382759 1389 ntBASIC6.45□□□□□ -1.38
CLCN1P35523 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC6.45□□□□□ -1.38
CLCN1P35523 AC104623.2-202ENST00000623477 4002 ntBASIC6.45□□□□□ -1.38
CLCN1P35523 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CLCN1P35523 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CLCN1P35523 Y_RNA.64-201ENST00000362845 102 ntBASIC6.45□□□□□ -1.38
CLCN1P35523 RNU6-263P-201ENST00000363811 107 ntBASIC6.45□□□□□ -1.38
CLCN1P35523 RN7SKP269-201ENST00000365545 319 ntBASIC6.45□□□□□ -1.38
CLCN1P35523 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.45□□□□□ -1.38
CLCN1P35523 RNU6-817P-201ENST00000391083 104 ntBASIC6.45□□□□□ -1.38
CLCN1P35523 AL445529.1-201ENST00000398713 389 ntBASIC6.45□□□□□ -1.38
CLCN1P35523 RPL21P67-201ENST00000402896 478 ntBASIC6.45□□□□□ -1.38
CLCN1P35523 RNU6-174P-201ENST00000410406 106 ntBASIC6.45□□□□□ -1.38
CLCN1P35523 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.45□□□□□ -1.38
CLCN1P35523 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC6.45□□□□□ -1.38
CLCN1P35523 MTND5P15-201ENST00000434246 349 ntBASIC6.45□□□□□ -1.38
CLCN1P35523 AC073063.1-201ENST00000434352 607 ntBASIC6.45□□□□□ -1.38
CLCN1P35523 AC023141.3-201ENST00000436698 278 ntBASIC6.45□□□□□ -1.38
CLCN1P35523 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC6.45□□□□□ -1.38
CLCN1P35523 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC6.45□□□□□ -1.38
CLCN1P35523 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC6.45□□□□□ -1.38
CLCN1P35523 GEMIN8P3-201ENST00000445417 720 ntBASIC6.45□□□□□ -1.38
CLCN1P35523 PPIAP7-201ENST00000454070 489 ntBASIC6.45□□□□□ -1.38
CLCN1P35523 Z92846.1-201ENST00000456203 268 ntBASIC6.45□□□□□ -1.38
CLCN1P35523 AL133445.1-201ENST00000467051 452 ntBASIC6.45□□□□□ -1.38
CLCN1P35523 HMGB1P35-201ENST00000503360 598 ntBASIC6.45□□□□□ -1.38
CLCN1P35523 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC6.45□□□□□ -1.38
CLCN1P35523 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC6.45□□□□□ -1.38
CLCN1P35523 AP000620.1-201ENST00000527147 504 ntBASIC6.45□□□□□ -1.38
CLCN1P35523 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.45□□□□□ -1.38
CLCN1P35523 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC6.45□□□□□ -1.38
CLCN1P35523 RN7SL230P-201ENST00000580835 303 ntBASIC6.45□□□□□ -1.38
CLCN1P35523 MIR4271-201ENST00000582451 67 ntBASIC6.45□□□□□ -1.38
CLCN1P35523 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC6.45□□□□□ -1.38
CLCN1P35523 OR1M4P-201ENST00000589199 287 ntBASIC6.45□□□□□ -1.38
CLCN1P35523 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC6.45□□□□□ -1.38
CLCN1P35523 MIR15A-201ENST00000607334 83 ntBASIC6.45□□□□□ -1.38
CLCN1P35523 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.45□□□□□ -1.38
CLCN1P35523 IRF5P1-201ENST00000504852 2164 ntBASIC6.45□□□□□ -1.38
CLCN1P35523 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CLCN1P35523 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CLCN1P35523 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC6.45□□□□□ -1.38
CLCN1P35523 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.45□□□□□ -1.38
CLCN1P35523 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.45□□□□□ -1.38
CLCN1P35523 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
CLCN1P35523 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
CLCN1P35523 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC6.44□□□□□ -1.38
CLCN1P35523 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
CLCN1P35523 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.44□□□□□ -1.38
CLCN1P35523 PHKBP1-201ENST00000450951 1951 ntBASIC6.44□□□□□ -1.38
CLCN1P35523 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CLCN1P35523 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CLCN1P35523 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
CLCN1P35523 AL672167.1-204ENST00000641875 3017 ntBASIC6.44□□□□□ -1.38
CLCN1P35523 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CLCN1P35523 Y_RNA.26-201ENST00000362539 101 ntBASIC6.44□□□□□ -1.38
CLCN1P35523 RNU1-134P-201ENST00000362935 165 ntBASIC6.44□□□□□ -1.38
CLCN1P35523 RN7SKP115-201ENST00000363177 317 ntBASIC6.44□□□□□ -1.38
CLCN1P35523 RNU6-371P-201ENST00000364283 108 ntBASIC6.44□□□□□ -1.38
CLCN1P35523 RN7SKP171-201ENST00000364417 303 ntBASIC6.44□□□□□ -1.38
CLCN1P35523 RNU6-596P-201ENST00000365395 98 ntBASIC6.44□□□□□ -1.38
CLCN1P35523 SNORA51.11-201ENST00000384442 131 ntBASIC6.44□□□□□ -1.38
CLCN1P35523 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CLCN1P35523 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC6.44□□□□□ -1.38
CLCN1P35523 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC6.44□□□□□ -1.38
CLCN1P35523 BX842559.1-201ENST00000419615 532 ntBASIC6.44□□□□□ -1.38
CLCN1P35523 RPS15AP6-201ENST00000420703 385 ntBASIC6.44□□□□□ -1.38
CLCN1P35523 AC130360.1-201ENST00000425489 1117 ntBASIC6.44□□□□□ -1.38
CLCN1P35523 DAP3P1-201ENST00000441522 278 ntBASIC6.44□□□□□ -1.38
CLCN1P35523 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
CLCN1P35523 FTLP8-201ENST00000446770 267 ntBASIC6.44□□□□□ -1.38
CLCN1P35523 MTND4LP30-201ENST00000454092 297 ntBASIC6.44□□□□□ -1.38
CLCN1P35523 AP002453.1-201ENST00000492327 668 ntBASIC6.44□□□□□ -1.38
CLCN1P35523 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC6.44□□□□□ -1.38
CLCN1P35523 AC113367.2-201ENST00000505749 160 ntBASIC6.44□□□□□ -1.38
CLCN1P35523 AC130365.2-201ENST00000525882 1201 ntBASIC6.44□□□□□ -1.38
CLCN1P35523 CBX3P8-201ENST00000532412 525 ntBASIC6.44□□□□□ -1.38
CLCN1P35523 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC6.44□□□□□ -1.38
CLCN1P35523 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC6.44□□□□□ -1.38
CLCN1P35523 AC007956.1-201ENST00000555623 542 ntBASIC6.44□□□□□ -1.38
CLCN1P35523 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC6.44□□□□□ -1.38
CLCN1P35523 AC104695.2-201ENST00000605056 775 ntBASIC6.44□□□□□ -1.38
CLCN1P35523 uc_338.26-201ENST00000612659 160 ntBASIC6.44□□□□□ -1.38
CLCN1P35523 SDR42E1P2-201ENST00000614861 481 ntBASIC6.44□□□□□ -1.38
CLCN1P35523 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CLCN1P35523 MFSD8-239ENST00000641590 2479 ntBASIC6.44□□□□□ -1.38
CLCN1P35523 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
CLCN1P35523 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CLCN1P35523 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CLCN1P35523 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CLCN1P35523 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CLCN1P35523 STX3-208ENST00000641815 3236 ntBASIC6.44□□□□□ -1.38
CLCN1P35523 MTND5P6-201ENST00000422338 1798 ntBASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms