Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 AL158825.1-201ENST00000414735 521 ntBASIC2.75□□□□□ -1.97
SCN4AP35499 AC018634.1-201ENST00000437554 401 ntBASIC2.75□□□□□ -1.97
SCN4AP35499 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.75□□□□□ -1.97
SCN4AP35499 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.75□□□□□ -1.97
SCN4AP35499 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.75□□□□□ -1.97
SCN4AP35499 LINC00888-204ENST00000487386 421 ntBASIC2.75□□□□□ -1.97
SCN4AP35499 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC2.75□□□□□ -1.97
SCN4AP35499 RNU6-295P-201ENST00000516901 104 ntBASIC2.75□□□□□ -1.97
SCN4AP35499 SNORA31.26-201ENST00000517250 137 ntBASIC2.75□□□□□ -1.97
SCN4AP35499 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC2.75□□□□□ -1.97
SCN4AP35499 AC104229.1-201ENST00000561364 255 ntBASIC2.75□□□□□ -1.97
SCN4AP35499 AC135178.6-201ENST00000605314 398 ntBASIC2.75□□□□□ -1.97
SCN4AP35499 AL163051.2-201ENST00000618976 735 ntBASIC2.75□□□□□ -1.97
SCN4AP35499 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC2.75□□□□□ -1.97
SCN4AP35499 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
SCN4AP35499 AC000367.1-201ENST00000452711 1766 ntBASIC2.75□□□□□ -1.97
SCN4AP35499 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.75□□□□□ -1.97
SCN4AP35499 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SCN4AP35499 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.75□□□□□ -1.97
SCN4AP35499 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SCN4AP35499 RNA5SP213-201ENST00000391031 106 ntBASIC2.75□□□□□ -1.97
SCN4AP35499 RNU6-77P-201ENST00000410554 91 ntBASIC2.75□□□□□ -1.97
SCN4AP35499 RNU6-321P-201ENST00000410912 106 ntBASIC2.75□□□□□ -1.97
SCN4AP35499 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC2.75□□□□□ -1.97
SCN4AP35499 AL445183.3-201ENST00000414168 502 ntBASIC2.75□□□□□ -1.97
SCN4AP35499 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SCN4AP35499 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC2.75□□□□□ -1.97
SCN4AP35499 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.75□□□□□ -1.97
SCN4AP35499 RPL21P47-201ENST00000483696 477 ntBASIC2.75□□□□□ -1.97
SCN4AP35499 AC010468.3-201ENST00000508225 458 ntBASIC2.75□□□□□ -1.97
SCN4AP35499 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC2.75□□□□□ -1.97
SCN4AP35499 MTND2P31-201ENST00000512602 616 ntBASIC2.75□□□□□ -1.97
SCN4AP35499 MAL2-205ENST00000521048 575 ntTSL 4 BASIC2.75□□□□□ -1.97
SCN4AP35499 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC2.75□□□□□ -1.97
SCN4AP35499 AP003168.1-201ENST00000530091 307 ntBASIC2.75□□□□□ -1.97
SCN4AP35499 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC2.75□□□□□ -1.97
SCN4AP35499 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC2.75□□□□□ -1.97
SCN4AP35499 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.75□□□□□ -1.97
SCN4AP35499 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC2.75□□□□□ -1.97
SCN4AP35499 U6.48-201ENST00000618523 106 ntBASIC2.75□□□□□ -1.97
SCN4AP35499 AP000943.4-201ENST00000622912 357 ntBASIC2.75□□□□□ -1.97
SCN4AP35499 AC080188.3-201ENST00000624842 748 ntBASIC2.75□□□□□ -1.97
SCN4AP35499 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SCN4AP35499 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SCN4AP35499 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SCN4AP35499 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.74□□□□□ -1.97
SCN4AP35499 AL592437.2-201ENST00000421655 2434 ntBASIC2.74□□□□□ -1.97
SCN4AP35499 AC025125.1-201ENST00000624743 1922 ntBASIC2.74□□□□□ -1.97
SCN4AP35499 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.74□□□□□ -1.97
SCN4AP35499 MIR6073-201ENST00000352083 89 ntBASIC2.74□□□□□ -1.97
SCN4AP35499 Y_RNA.796-201ENST00000364268 102 ntBASIC2.74□□□□□ -1.97
SCN4AP35499 Y_RNA.799-201ENST00000364992 102 ntBASIC2.74□□□□□ -1.97
SCN4AP35499 AL162578.1-201ENST00000406202 378 ntBASIC2.74□□□□□ -1.97
SCN4AP35499 RAD23BP2-201ENST00000416003 1207 ntBASIC2.74□□□□□ -1.97
SCN4AP35499 ARL2BPP3-201ENST00000421226 480 ntBASIC2.74□□□□□ -1.97
SCN4AP35499 AC072039.1-201ENST00000477611 581 ntBASIC2.74□□□□□ -1.97
SCN4AP35499 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.74□□□□□ -1.97
SCN4AP35499 AC008494.2-201ENST00000514544 370 ntBASIC2.74□□□□□ -1.97
SCN4AP35499 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC2.74□□□□□ -1.97
SCN4AP35499 AC090695.1-201ENST00000561269 1222 ntBASIC2.74□□□□□ -1.97
SCN4AP35499 MIR3670-2-201ENST00000582974 65 ntBASIC2.74□□□□□ -1.97
SCN4AP35499 MIR3670-1-201ENST00000584160 65 ntBASIC2.74□□□□□ -1.97
SCN4AP35499 MIR3670-3-201ENST00000584855 65 ntBASIC2.74□□□□□ -1.97
SCN4AP35499 AC061975.8-201ENST00000587058 721 ntBASIC2.74□□□□□ -1.97
SCN4AP35499 AC023043.2-201ENST00000589678 1026 ntBASIC2.74□□□□□ -1.97
SCN4AP35499 MIR3670-4-201ENST00000612260 65 ntBASIC2.74□□□□□ -1.97
SCN4AP35499 MIR6766-201ENST00000622641 72 ntBASIC2.74□□□□□ -1.97
SCN4AP35499 MTND5P29-201ENST00000458676 1807 ntBASIC2.74□□□□□ -1.97
SCN4AP35499 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.74□□□□□ -1.97
SCN4AP35499 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
SCN4AP35499 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.73□□□□□ -1.97
SCN4AP35499 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
SCN4AP35499 RNU6-185P-201ENST00000384421 107 ntBASIC2.73□□□□□ -1.97
SCN4AP35499 FAT1P1-201ENST00000406588 507 ntBASIC2.73□□□□□ -1.97
SCN4AP35499 AL450338.1-201ENST00000407987 512 ntBASIC2.73□□□□□ -1.97
SCN4AP35499 RNU4-74P-201ENST00000411280 161 ntBASIC2.73□□□□□ -1.97
SCN4AP35499 USP9YP19-201ENST00000412165 485 ntBASIC2.73□□□□□ -1.97
SCN4AP35499 AL138785.1-201ENST00000425821 331 ntBASIC2.73□□□□□ -1.97
SCN4AP35499 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC2.73□□□□□ -1.97
SCN4AP35499 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC2.73□□□□□ -1.97
SCN4AP35499 AL353093.1-201ENST00000441292 436 ntBASIC2.73□□□□□ -1.97
SCN4AP35499 AC007000.2-201ENST00000442564 487 ntBASIC2.73□□□□□ -1.97
SCN4AP35499 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC2.73□□□□□ -1.97
SCN4AP35499 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC2.73□□□□□ -1.97
SCN4AP35499 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.73□□□□□ -1.97
SCN4AP35499 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC2.73□□□□□ -1.97
SCN4AP35499 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC2.73□□□□□ -1.97
SCN4AP35499 OR7K1P-201ENST00000546439 926 ntBASIC2.73□□□□□ -1.97
SCN4AP35499 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC2.73□□□□□ -1.97
SCN4AP35499 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.73□□□□□ -1.97
SCN4AP35499 MIR4716-201ENST00000579628 84 ntBASIC2.73□□□□□ -1.97
SCN4AP35499 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC2.73□□□□□ -1.97
SCN4AP35499 AC131902.3-201ENST00000611767 581 ntBASIC2.73□□□□□ -1.97
SCN4AP35499 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC2.73□□□□□ -1.97
SCN4AP35499 AK6-205ENST00000618980 483 ntTSL 2 BASIC2.73□□□□□ -1.97
SCN4AP35499 MTND4P31-201ENST00000425607 1343 ntBASIC2.73□□□□□ -1.97
SCN4AP35499 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.73□□□□□ -1.97
SCN4AP35499 AL359893.1-201ENST00000447628 1580 ntBASIC2.73□□□□□ -1.97
SCN4AP35499 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
SCN4AP35499 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms