Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HOXC13P31276 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.8□□□□□ -1.8
HOXC13P31276 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC3.8□□□□□ -1.8
HOXC13P31276 AC005832.3-201ENST00000537929 631 ntBASIC3.8□□□□□ -1.8
HOXC13P31276 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.8□□□□□ -1.8
HOXC13P31276 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.8□□□□□ -1.8
HOXC13P31276 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.8□□□□□ -1.8
HOXC13P31276 LARP7P2-201ENST00000575306 125 ntBASIC3.8□□□□□ -1.8
HOXC13P31276 COX6CP3-201ENST00000580869 223 ntBASIC3.8□□□□□ -1.8
HOXC13P31276 AL139344.1-201ENST00000605228 195 ntBASIC3.8□□□□□ -1.8
HOXC13P31276 AC018638.7-201ENST00000605836 1114 ntBASIC3.8□□□□□ -1.8
HOXC13P31276 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HOXC13P31276 AC091925.2-201ENST00000625059 256 ntBASIC3.8□□□□□ -1.8
HOXC13P31276 GMFB-210ENST00000628554 639 ntTSL 4 BASIC3.8□□□□□ -1.8
HOXC13P31276 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
HOXC13P31276 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HOXC13P31276 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.79□□□□□ -1.8
HOXC13P31276 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.79□□□□□ -1.8
HOXC13P31276 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.79□□□□□ -1.8
HOXC13P31276 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.79□□□□□ -1.8
HOXC13P31276 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HOXC13P31276 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
HOXC13P31276 SNORD9-201ENST00000362566 104 ntBASIC3.79□□□□□ -1.8
HOXC13P31276 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
HOXC13P31276 SNORD51-201ENST00000384320 80 ntBASIC3.79□□□□□ -1.8
HOXC13P31276 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
HOXC13P31276 Y_RNA.599-201ENST00000410489 109 ntBASIC3.79□□□□□ -1.8
HOXC13P31276 ATP5A1P2-201ENST00000412323 255 ntBASIC3.79□□□□□ -1.8
HOXC13P31276 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.79□□□□□ -1.8
HOXC13P31276 HMGB3P20-201ENST00000417997 600 ntBASIC3.79□□□□□ -1.8
HOXC13P31276 RPS3AP37-201ENST00000419176 745 ntBASIC3.79□□□□□ -1.8
HOXC13P31276 AC010099.3-201ENST00000423896 409 ntBASIC3.79□□□□□ -1.8
HOXC13P31276 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.79□□□□□ -1.8
HOXC13P31276 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC3.79□□□□□ -1.8
HOXC13P31276 NANOGP2-201ENST00000435391 727 ntBASIC3.79□□□□□ -1.8
HOXC13P31276 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC3.79□□□□□ -1.8
HOXC13P31276 EEF1A1P39-201ENST00000440791 250 ntBASIC3.79□□□□□ -1.8
HOXC13P31276 MTCO2P7-201ENST00000446518 666 ntBASIC3.79□□□□□ -1.8
HOXC13P31276 HMGB3P8-201ENST00000449709 577 ntBASIC3.79□□□□□ -1.8
HOXC13P31276 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.79□□□□□ -1.8
HOXC13P31276 DNAJC19P1-201ENST00000455312 319 ntBASIC3.79□□□□□ -1.8
HOXC13P31276 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.79□□□□□ -1.8
HOXC13P31276 AC011979.1-201ENST00000472300 483 ntBASIC3.79□□□□□ -1.8
HOXC13P31276 RAP1BP2-201ENST00000478270 544 ntBASIC3.79□□□□□ -1.8
HOXC13P31276 BET1P1-201ENST00000482276 359 ntBASIC3.79□□□□□ -1.8
HOXC13P31276 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.79□□□□□ -1.8
HOXC13P31276 AC107401.1-201ENST00000503426 685 ntBASIC3.79□□□□□ -1.8
HOXC13P31276 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.79□□□□□ -1.8
HOXC13P31276 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.79□□□□□ -1.8
HOXC13P31276 MTND4LP22-201ENST00000508209 276 ntBASIC3.79□□□□□ -1.8
HOXC13P31276 RNU6-27P-201ENST00000516146 107 ntBASIC3.79□□□□□ -1.8
HOXC13P31276 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC3.79□□□□□ -1.8
HOXC13P31276 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.79□□□□□ -1.8
HOXC13P31276 RANP9-201ENST00000519957 271 ntBASIC3.79□□□□□ -1.8
HOXC13P31276 AC008489.1-201ENST00000524271 483 ntBASIC3.79□□□□□ -1.8
HOXC13P31276 AC008011.1-201ENST00000545989 227 ntBASIC3.79□□□□□ -1.8
HOXC13P31276 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC3.79□□□□□ -1.8
HOXC13P31276 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.79□□□□□ -1.8
HOXC13P31276 OR4T1P-201ENST00000554933 911 ntBASIC3.79□□□□□ -1.8
HOXC13P31276 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC3.79□□□□□ -1.8
HOXC13P31276 AC015688.2-201ENST00000584523 262 ntBASIC3.79□□□□□ -1.8
HOXC13P31276 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.79□□□□□ -1.8
HOXC13P31276 BDH2P1-201ENST00000602288 736 ntBASIC3.79□□□□□ -1.8
HOXC13P31276 AC021171.1-201ENST00000603137 706 ntBASIC3.79□□□□□ -1.8
HOXC13P31276 AL160237.3-201ENST00000604114 1013 ntBASIC3.79□□□□□ -1.8
HOXC13P31276 MIR6076-201ENST00000617521 113 ntBASIC3.79□□□□□ -1.8
HOXC13P31276 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC3.79□□□□□ -1.8
HOXC13P31276 MIR3974-201ENST00000637126 96 ntBASIC3.79□□□□□ -1.8
HOXC13P31276 AC244258.1-201ENST00000637553 1071 ntBASIC3.79□□□□□ -1.8
HOXC13P31276 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HOXC13P31276 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
HOXC13P31276 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.79□□□□□ -1.8
HOXC13P31276 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
HOXC13P31276 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HOXC13P31276 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
HOXC13P31276 AP000526.1-201ENST00000603308 1388 ntBASIC3.78□□□□□ -1.8
HOXC13P31276 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.78□□□□□ -1.8
HOXC13P31276 AL079305.1-201ENST00000623159 3008 ntBASIC3.78□□□□□ -1.8
HOXC13P31276 AL590084.1-201ENST00000407885 387 ntBASIC3.78□□□□□ -1.8
HOXC13P31276 AL137014.1-201ENST00000420490 1226 ntBASIC3.78□□□□□ -1.8
HOXC13P31276 RPL21P40-201ENST00000428586 483 ntBASIC3.78□□□□□ -1.8
HOXC13P31276 AC004866.2-201ENST00000438285 481 ntBASIC3.78□□□□□ -1.8
HOXC13P31276 OR10R1P-201ENST00000441524 1141 ntBASIC3.78□□□□□ -1.8
HOXC13P31276 MTCO2P25-201ENST00000447065 681 ntBASIC3.78□□□□□ -1.8
HOXC13P31276 RPS3AP46-201ENST00000448352 682 ntBASIC3.78□□□□□ -1.8
HOXC13P31276 USP9YP34-201ENST00000453983 808 ntBASIC3.78□□□□□ -1.8
HOXC13P31276 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.78□□□□□ -1.8
HOXC13P31276 HMGB1P25-201ENST00000468402 607 ntBASIC3.78□□□□□ -1.8
HOXC13P31276 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.78□□□□□ -1.8
HOXC13P31276 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HOXC13P31276 RPS29P2-201ENST00000479278 136 ntBASIC3.78□□□□□ -1.8
HOXC13P31276 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.78□□□□□ -1.8
HOXC13P31276 HMGB1P28-201ENST00000507778 552 ntBASIC3.78□□□□□ -1.8
HOXC13P31276 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.78□□□□□ -1.8
HOXC13P31276 SNORA31.1-201ENST00000515993 133 ntBASIC3.78□□□□□ -1.8
HOXC13P31276 RNU6-1095P-201ENST00000516148 108 ntBASIC3.78□□□□□ -1.8
HOXC13P31276 SNORA31.5-201ENST00000516190 133 ntBASIC3.78□□□□□ -1.8
HOXC13P31276 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.78□□□□□ -1.8
HOXC13P31276 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC3.78□□□□□ -1.8
HOXC13P31276 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms