Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 CDK8P2-201ENST00000415020 547 ntBASIC3.2□□□□□ -1.9
SHC1P29353 RPL23AP39-201ENST00000415533 405 ntBASIC3.2□□□□□ -1.9
SHC1P29353 MTCYBP38-201ENST00000417160 1123 ntBASIC3.2□□□□□ -1.9
SHC1P29353 RPL31P12-201ENST00000422587 358 ntBASIC3.2□□□□□ -1.9
SHC1P29353 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.2□□□□□ -1.9
SHC1P29353 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.2□□□□□ -1.9
SHC1P29353 BX679664.1-201ENST00000434429 253 ntBASIC3.2□□□□□ -1.9
SHC1P29353 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC3.2□□□□□ -1.9
SHC1P29353 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.2□□□□□ -1.9
SHC1P29353 COX6CP12-201ENST00000446748 202 ntBASIC3.2□□□□□ -1.9
SHC1P29353 ST13P20-201ENST00000447996 1065 ntBASIC3.2□□□□□ -1.9
SHC1P29353 BX276092.4-201ENST00000452056 248 ntBASIC3.2□□□□□ -1.9
SHC1P29353 SNRPGP9-201ENST00000456025 225 ntBASIC3.2□□□□□ -1.9
SHC1P29353 AC010401.1-201ENST00000463867 348 ntBASIC3.2□□□□□ -1.9
SHC1P29353 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.2□□□□□ -1.9
SHC1P29353 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3.2□□□□□ -1.9
SHC1P29353 AC020893.1-201ENST00000502452 580 ntBASIC3.2□□□□□ -1.9
SHC1P29353 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.2□□□□□ -1.9
SHC1P29353 AC006499.5-201ENST00000505037 514 ntBASIC3.2□□□□□ -1.9
SHC1P29353 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.2□□□□□ -1.9
SHC1P29353 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.2□□□□□ -1.9
SHC1P29353 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SHC1P29353 MTCYBP43-201ENST00000513621 740 ntBASIC3.2□□□□□ -1.9
SHC1P29353 RNU4-60P-201ENST00000517239 135 ntBASIC3.2□□□□□ -1.9
SHC1P29353 MTND1P5-201ENST00000517906 940 ntBASIC3.2□□□□□ -1.9
SHC1P29353 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC3.2□□□□□ -1.9
SHC1P29353 AC027309.2-201ENST00000520566 192 ntBASIC3.2□□□□□ -1.9
SHC1P29353 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.2□□□□□ -1.9
SHC1P29353 AP006245.1-201ENST00000522549 120 ntBASIC3.2□□□□□ -1.9
SHC1P29353 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.2□□□□□ -1.9
SHC1P29353 AP000790.1-201ENST00000528891 737 ntBASIC3.2□□□□□ -1.9
SHC1P29353 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.2□□□□□ -1.9
SHC1P29353 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.2□□□□□ -1.9
SHC1P29353 AC090502.2-201ENST00000549267 280 ntBASIC3.2□□□□□ -1.9
SHC1P29353 SERPINE4P-201ENST00000554978 281 ntBASIC3.2□□□□□ -1.9
SHC1P29353 AC027807.1-201ENST00000559921 996 ntBASIC3.2□□□□□ -1.9
SHC1P29353 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.2□□□□□ -1.9
SHC1P29353 AC073648.5-201ENST00000603502 305 ntBASIC3.2□□□□□ -1.9
SHC1P29353 AC107304.1-201ENST00000604229 296 ntBASIC3.2□□□□□ -1.9
SHC1P29353 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.2□□□□□ -1.9
SHC1P29353 AP001521.1-201ENST00000609150 300 ntBASIC3.2□□□□□ -1.9
SHC1P29353 AC025594.3-201ENST00000613068 790 ntBASIC3.2□□□□□ -1.9
SHC1P29353 AC100793.4-201ENST00000613683 429 ntBASIC3.2□□□□□ -1.9
SHC1P29353 AL590240.3-201ENST00000621416 943 ntBASIC3.2□□□□□ -1.9
SHC1P29353 AC018816.2-201ENST00000621460 353 ntBASIC3.2□□□□□ -1.9
SHC1P29353 AC079228.1-201ENST00000624774 1049 ntBASIC3.2□□□□□ -1.9
SHC1P29353 AC006927.3-201ENST00000638789 384 ntBASIC3.2□□□□□ -1.9
SHC1P29353 MTND5P3-201ENST00000438536 1800 ntBASIC3.2□□□□□ -1.9
SHC1P29353 MTND5P29-201ENST00000458676 1807 ntBASIC3.2□□□□□ -1.9
SHC1P29353 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.2□□□□□ -1.9
SHC1P29353 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.2□□□□□ -1.9
SHC1P29353 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.2□□□□□ -1.9
SHC1P29353 AC068647.1-201ENST00000489539 2265 ntBASIC3.19□□□□□ -1.9
SHC1P29353 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.19□□□□□ -1.9
SHC1P29353 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SHC1P29353 ZNF826P-207ENST00000622273 1910 ntBASIC3.19□□□□□ -1.9
SHC1P29353 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.19□□□□□ -1.9
SHC1P29353 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
SHC1P29353 FRG1CP-201ENST00000358464 769 ntBASIC3.19□□□□□ -1.9
SHC1P29353 Y_RNA.3-201ENST00000362331 103 ntBASIC3.19□□□□□ -1.9
SHC1P29353 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.19□□□□□ -1.9
SHC1P29353 RNA5SP88-201ENST00000365560 109 ntBASIC3.19□□□□□ -1.9
SHC1P29353 SNORA75-201ENST00000384158 137 ntBASIC3.19□□□□□ -1.9
SHC1P29353 RNU6-1119P-201ENST00000384349 108 ntBASIC3.19□□□□□ -1.9
SHC1P29353 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
SHC1P29353 RNU6-328P-201ENST00000390887 106 ntBASIC3.19□□□□□ -1.9
SHC1P29353 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SHC1P29353 AL663109.1-201ENST00000411498 844 ntBASIC3.19□□□□□ -1.9
SHC1P29353 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.19□□□□□ -1.9
SHC1P29353 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.19□□□□□ -1.9
SHC1P29353 CRYBB2P1-203ENST00000415709 538 ntBASIC3.19□□□□□ -1.9
SHC1P29353 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.19□□□□□ -1.9
SHC1P29353 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.19□□□□□ -1.9
SHC1P29353 AC069157.1-201ENST00000421749 137 ntBASIC3.19□□□□□ -1.9
SHC1P29353 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.19□□□□□ -1.9
SHC1P29353 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.19□□□□□ -1.9
SHC1P29353 CYCSP4-201ENST00000429682 331 ntBASIC3.19□□□□□ -1.9
SHC1P29353 HMGN2P31-201ENST00000432430 273 ntBASIC3.19□□□□□ -1.9
SHC1P29353 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC3.19□□□□□ -1.9
SHC1P29353 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.19□□□□□ -1.9
SHC1P29353 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.19□□□□□ -1.9
SHC1P29353 MTND2P20-201ENST00000440805 661 ntBASIC3.19□□□□□ -1.9
SHC1P29353 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.19□□□□□ -1.9
SHC1P29353 NDUFAF4P4-201ENST00000454883 502 ntBASIC3.19□□□□□ -1.9
SHC1P29353 AC091564.1-201ENST00000464563 479 ntBASIC3.19□□□□□ -1.9
SHC1P29353 RPS4XP22-201ENST00000480755 780 ntBASIC3.19□□□□□ -1.9
SHC1P29353 AC078817.1-201ENST00000492623 435 ntBASIC3.19□□□□□ -1.9
SHC1P29353 OR4G11P-201ENST00000492842 939 ntBASIC3.19□□□□□ -1.9
SHC1P29353 AP002812.1-201ENST00000495378 474 ntBASIC3.19□□□□□ -1.9
SHC1P29353 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.19□□□□□ -1.9
SHC1P29353 RNU6-583P-201ENST00000516012 92 ntBASIC3.19□□□□□ -1.9
SHC1P29353 RNU6-720P-201ENST00000516363 108 ntBASIC3.19□□□□□ -1.9
SHC1P29353 RNA5SP309-201ENST00000516670 106 ntBASIC3.19□□□□□ -1.9
SHC1P29353 IGKV2D-19-201ENST00000523346 262 ntBASIC3.19□□□□□ -1.9
SHC1P29353 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.19□□□□□ -1.9
SHC1P29353 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SHC1P29353 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.19□□□□□ -1.9
SHC1P29353 AL845331.3-202ENST00000562856 261 ntBASIC3.19□□□□□ -1.9
SHC1P29353 AC010546.1-201ENST00000569391 485 ntBASIC3.19□□□□□ -1.9
SHC1P29353 AC074051.3-201ENST00000570238 358 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms