Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 AC027309.3-201ENST00000623419 351 ntBASIC2.44□□□□□ -2.02
HLA-DMAP28067 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC2.44□□□□□ -2.02
HLA-DMAP28067 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.44□□□□□ -2.02
HLA-DMAP28067 RNU6-609P-201ENST00000365459 107 ntBASIC2.43□□□□□ -2.02
HLA-DMAP28067 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
HLA-DMAP28067 AP002784.2-201ENST00000397300 549 ntBASIC2.43□□□□□ -2.02
HLA-DMAP28067 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC2.43□□□□□ -2.02
HLA-DMAP28067 RPL7P37-201ENST00000425095 738 ntBASIC2.43□□□□□ -2.02
HLA-DMAP28067 AL512637.2-201ENST00000431287 1256 ntBASIC2.43□□□□□ -2.02
HLA-DMAP28067 AC234064.1-201ENST00000436312 247 ntBASIC2.43□□□□□ -2.02
HLA-DMAP28067 Z75741.1-201ENST00000446793 314 ntBASIC2.43□□□□□ -2.02
HLA-DMAP28067 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC2.43□□□□□ -2.02
HLA-DMAP28067 PABPC1P3-201ENST00000469174 459 ntBASIC2.43□□□□□ -2.02
HLA-DMAP28067 AC117440.1-201ENST00000474107 571 ntBASIC2.43□□□□□ -2.02
HLA-DMAP28067 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
HLA-DMAP28067 MTCO2P9-201ENST00000503214 694 ntBASIC2.43□□□□□ -2.02
HLA-DMAP28067 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.43□□□□□ -2.02
HLA-DMAP28067 AC008716.1-201ENST00000511084 513 ntBASIC2.43□□□□□ -2.02
HLA-DMAP28067 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
HLA-DMAP28067 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC2.43□□□□□ -2.02
HLA-DMAP28067 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.43□□□□□ -2.02
HLA-DMAP28067 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
HLA-DMAP28067 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC2.43□□□□□ -2.02
HLA-DMAP28067 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC2.43□□□□□ -2.02
HLA-DMAP28067 HMGB1P14-201ENST00000557424 591 ntBASIC2.43□□□□□ -2.02
HLA-DMAP28067 ZNF971P-201ENST00000562068 1249 ntBASIC2.43□□□□□ -2.02
HLA-DMAP28067 MIR4446-201ENST00000578505 67 ntBASIC2.43□□□□□ -2.02
HLA-DMAP28067 BPTFP1-201ENST00000579209 492 ntBASIC2.43□□□□□ -2.02
HLA-DMAP28067 AL161629.2-201ENST00000615347 275 ntBASIC2.43□□□□□ -2.02
HLA-DMAP28067 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC2.43□□□□□ -2.02
HLA-DMAP28067 FO624990.1-201ENST00000636373 85 ntBASIC2.43□□□□□ -2.02
HLA-DMAP28067 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
HLA-DMAP28067 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
HLA-DMAP28067 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
HLA-DMAP28067 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.43□□□□□ -2.02
HLA-DMAP28067 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.43□□□□□ -2.02
HLA-DMAP28067 SGO1P1-201ENST00000603525 1447 ntBASIC2.42□□□□□ -2.02
HLA-DMAP28067 NUP58P1-201ENST00000502546 1738 ntBASIC2.42□□□□□ -2.02
HLA-DMAP28067 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
HLA-DMAP28067 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
HLA-DMAP28067 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.42□□□□□ -2.02
HLA-DMAP28067 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
HLA-DMAP28067 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.42□□□□□ -2.02
HLA-DMAP28067 MIR16-1-201ENST00000385271 89 ntBASIC2.42□□□□□ -2.02
HLA-DMAP28067 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
HLA-DMAP28067 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
HLA-DMAP28067 AL023807.1-201ENST00000407932 359 ntBASIC2.42□□□□□ -2.02
HLA-DMAP28067 RN7SKP202-201ENST00000410439 330 ntBASIC2.42□□□□□ -2.02
HLA-DMAP28067 RNU6-193P-201ENST00000410977 107 ntBASIC2.42□□□□□ -2.02
HLA-DMAP28067 RNU2-72P-201ENST00000411175 163 ntBASIC2.42□□□□□ -2.02
HLA-DMAP28067 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC2.42□□□□□ -2.02
HLA-DMAP28067 SFR1P2-201ENST00000421841 730 ntBASIC2.42□□□□□ -2.02
HLA-DMAP28067 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC2.42□□□□□ -2.02
HLA-DMAP28067 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
HLA-DMAP28067 AC018644.1-201ENST00000429934 551 ntBASIC2.42□□□□□ -2.02
HLA-DMAP28067 AC097713.2-201ENST00000430199 356 ntBASIC2.42□□□□□ -2.02
HLA-DMAP28067 AC091286.1-201ENST00000431233 461 ntBASIC2.42□□□□□ -2.02
HLA-DMAP28067 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC2.42□□□□□ -2.02
HLA-DMAP28067 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC2.42□□□□□ -2.02
HLA-DMAP28067 AL050341.1-201ENST00000447743 313 ntBASIC2.42□□□□□ -2.02
HLA-DMAP28067 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.42□□□□□ -2.02
HLA-DMAP28067 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC2.42□□□□□ -2.02
HLA-DMAP28067 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.42□□□□□ -2.02
HLA-DMAP28067 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC2.42□□□□□ -2.02
HLA-DMAP28067 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC2.42□□□□□ -2.02
HLA-DMAP28067 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC2.42□□□□□ -2.02
HLA-DMAP28067 CDC42P4-201ENST00000510507 563 ntBASIC2.42□□□□□ -2.02
HLA-DMAP28067 OR5BM1P-201ENST00000512021 366 ntBASIC2.42□□□□□ -2.02
HLA-DMAP28067 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC2.42□□□□□ -2.02
HLA-DMAP28067 SNORA31.11-201ENST00000516528 139 ntBASIC2.42□□□□□ -2.02
HLA-DMAP28067 IGKV3OR22-2-201ENST00000517943 313 ntBASIC2.42□□□□□ -2.02
HLA-DMAP28067 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.42□□□□□ -2.02
HLA-DMAP28067 AP003102.1-201ENST00000525638 661 ntBASIC2.42□□□□□ -2.02
HLA-DMAP28067 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.42□□□□□ -2.02
HLA-DMAP28067 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.42□□□□□ -2.02
HLA-DMAP28067 AL035413.2-201ENST00000604801 525 ntBASIC2.42□□□□□ -2.02
HLA-DMAP28067 AL136363.1-201ENST00000605349 337 ntBASIC2.42□□□□□ -2.02
HLA-DMAP28067 AC009318.4-201ENST00000620496 486 ntBASIC2.42□□□□□ -2.02
HLA-DMAP28067 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.42□□□□□ -2.02
HLA-DMAP28067 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.42□□□□□ -2.02
HLA-DMAP28067 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.42□□□□□ -2.02
HLA-DMAP28067 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.41□□□□□ -2.02
HLA-DMAP28067 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.41□□□□□ -2.02
HLA-DMAP28067 MAPK10-266ENST00000641066 6555 ntBASIC2.41□□□□□ -2.02
HLA-DMAP28067 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
HLA-DMAP28067 SNORD82-201ENST00000365530 70 ntBASIC2.41□□□□□ -2.02
HLA-DMAP28067 RNU1-138P-201ENST00000384093 164 ntBASIC2.41□□□□□ -2.02
HLA-DMAP28067 RNU6-207P-201ENST00000384137 107 ntBASIC2.41□□□□□ -2.02
HLA-DMAP28067 SLC9B1P2-201ENST00000398120 1184 ntBASIC2.41□□□□□ -2.02
HLA-DMAP28067 SUMO1P4-201ENST00000429430 302 ntBASIC2.41□□□□□ -2.02
HLA-DMAP28067 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC2.41□□□□□ -2.02
HLA-DMAP28067 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.41□□□□□ -2.02
HLA-DMAP28067 PRDX3P3-201ENST00000447765 522 ntBASIC2.41□□□□□ -2.02
HLA-DMAP28067 AL359073.1-201ENST00000448036 403 ntBASIC2.41□□□□□ -2.02
HLA-DMAP28067 AL133547.1-201ENST00000448546 220 ntBASIC2.41□□□□□ -2.02
HLA-DMAP28067 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC2.41□□□□□ -2.02
HLA-DMAP28067 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC2.41□□□□□ -2.02
HLA-DMAP28067 AC003982.1-202ENST00000469928 248 ntBASIC2.41□□□□□ -2.02
HLA-DMAP28067 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
HLA-DMAP28067 SRIP1-201ENST00000489235 288 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms