Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
VAMP1P23763 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
VAMP1P23763 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.79□□□□□ -1.64
VAMP1P23763 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
VAMP1P23763 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
VAMP1P23763 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
VAMP1P23763 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.79□□□□□ -1.64
VAMP1P23763 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
VAMP1P23763 Y_RNA.259-201ENST00000364619 101 ntBASIC4.79□□□□□ -1.64
VAMP1P23763 Y_RNA.813-201ENST00000364639 102 ntBASIC4.79□□□□□ -1.64
VAMP1P23763 RPS4XP3-201ENST00000398541 413 ntBASIC4.79□□□□□ -1.64
VAMP1P23763 AL356057.2-201ENST00000403318 432 ntBASIC4.79□□□□□ -1.64
VAMP1P23763 GGA1-205ENST00000405147 575 ntTSL 4 BASIC4.79□□□□□ -1.64
VAMP1P23763 Y_RNA.623-201ENST00000411128 95 ntBASIC4.79□□□□□ -1.64
VAMP1P23763 AC092047.1-201ENST00000424997 240 ntBASIC4.79□□□□□ -1.64
VAMP1P23763 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
VAMP1P23763 AC018644.1-201ENST00000429934 551 ntBASIC4.79□□□□□ -1.64
VAMP1P23763 TMEM183AP1-205ENST00000432739 290 ntBASIC4.79□□□□□ -1.64
VAMP1P23763 AC007389.2-201ENST00000434630 306 ntBASIC4.79□□□□□ -1.64
VAMP1P23763 SNRPEP4-201ENST00000435815 279 ntBASIC4.79□□□□□ -1.64
VAMP1P23763 RPS12P17-201ENST00000438591 377 ntBASIC4.79□□□□□ -1.64
VAMP1P23763 AL138899.2-201ENST00000439139 499 ntBASIC4.79□□□□□ -1.64
VAMP1P23763 RPS10P14-201ENST00000440748 502 ntBASIC4.79□□□□□ -1.64
VAMP1P23763 AL391987.1-201ENST00000441025 200 ntBASIC4.79□□□□□ -1.64
VAMP1P23763 AL078601.1-201ENST00000444542 271 ntBASIC4.79□□□□□ -1.64
VAMP1P23763 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
VAMP1P23763 RPL12P25-201ENST00000455592 494 ntBASIC4.79□□□□□ -1.64
VAMP1P23763 DHFRP3-201ENST00000455595 559 ntBASIC4.79□□□□□ -1.64
VAMP1P23763 Y_RNA.632-201ENST00000459189 102 ntBASIC4.79□□□□□ -1.64
VAMP1P23763 RPS10P28-201ENST00000480396 498 ntBASIC4.79□□□□□ -1.64
VAMP1P23763 RPL21P13-201ENST00000488305 481 ntBASIC4.79□□□□□ -1.64
VAMP1P23763 AP002453.1-201ENST00000492327 668 ntBASIC4.79□□□□□ -1.64
VAMP1P23763 AC009567.2-201ENST00000502989 349 ntBASIC4.79□□□□□ -1.64
VAMP1P23763 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC4.79□□□□□ -1.64
VAMP1P23763 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.79□□□□□ -1.64
VAMP1P23763 RNU1-54P-201ENST00000517181 120 ntBASIC4.79□□□□□ -1.64
VAMP1P23763 SNORA25.17-201ENST00000517184 124 ntBASIC4.79□□□□□ -1.64
VAMP1P23763 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC4.79□□□□□ -1.64
VAMP1P23763 AC087369.1-201ENST00000520775 996 ntBASIC4.79□□□□□ -1.64
VAMP1P23763 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC4.79□□□□□ -1.64
VAMP1P23763 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC4.79□□□□□ -1.64
VAMP1P23763 AP005639.2-201ENST00000527592 928 ntBASIC4.79□□□□□ -1.64
VAMP1P23763 AC137627.1-201ENST00000545761 289 ntBASIC4.79□□□□□ -1.64
VAMP1P23763 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.79□□□□□ -1.64
VAMP1P23763 CHEK2P2-201ENST00000554701 672 ntBASIC4.79□□□□□ -1.64
VAMP1P23763 MIR378H-201ENST00000579966 83 ntBASIC4.79□□□□□ -1.64
VAMP1P23763 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.79□□□□□ -1.64
VAMP1P23763 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC4.79□□□□□ -1.64
VAMP1P23763 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.79□□□□□ -1.64
VAMP1P23763 AC008507.3-201ENST00000585753 472 ntBASIC4.79□□□□□ -1.64
VAMP1P23763 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC4.79□□□□□ -1.64
VAMP1P23763 AC016727.1-205ENST00000605437 569 ntBASIC4.79□□□□□ -1.64
VAMP1P23763 NQO2-209ENST00000606474 470 ntTSL 3 BASIC4.79□□□□□ -1.64
VAMP1P23763 AL139124.1-201ENST00000609123 421 ntBASIC4.79□□□□□ -1.64
VAMP1P23763 PACRG-210ENST00000611387 279 ntTSL 5 BASIC4.79□□□□□ -1.64
VAMP1P23763 AL138726.1-201ENST00000614873 333 ntBASIC4.79□□□□□ -1.64
VAMP1P23763 AC126177.8-201ENST00000618339 1015 ntBASIC4.79□□□□□ -1.64
VAMP1P23763 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC4.79□□□□□ -1.64
VAMP1P23763 AC103564.3-201ENST00000621194 220 ntBASIC4.79□□□□□ -1.64
VAMP1P23763 AC073308.1-201ENST00000623696 305 ntBASIC4.79□□□□□ -1.64
VAMP1P23763 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC4.79□□□□□ -1.64
VAMP1P23763 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
VAMP1P23763 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
VAMP1P23763 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
VAMP1P23763 AC022336.2-201ENST00000568966 2538 ntBASIC4.79□□□□□ -1.64
VAMP1P23763 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
VAMP1P23763 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
VAMP1P23763 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
VAMP1P23763 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC4.78□□□□□ -1.64
VAMP1P23763 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
VAMP1P23763 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
VAMP1P23763 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
VAMP1P23763 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
VAMP1P23763 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.78□□□□□ -1.64
VAMP1P23763 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
VAMP1P23763 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
VAMP1P23763 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
VAMP1P23763 AC138393.1-203ENST00000327086 343 ntBASIC4.78□□□□□ -1.64
VAMP1P23763 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
VAMP1P23763 FTLP6-201ENST00000355274 422 ntBASIC4.78□□□□□ -1.64
VAMP1P23763 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
VAMP1P23763 Y_RNA.474-201ENST00000384341 102 ntBASIC4.78□□□□□ -1.64
VAMP1P23763 MIR10A-201ENST00000385043 110 ntBASIC4.78□□□□□ -1.64
VAMP1P23763 AL391417.1-201ENST00000404100 426 ntBASIC4.78□□□□□ -1.64
VAMP1P23763 AL035079.1-201ENST00000405210 287 ntBASIC4.78□□□□□ -1.64
VAMP1P23763 MIR548K-201ENST00000408406 116 ntBASIC4.78□□□□□ -1.64
VAMP1P23763 RNU6-293P-201ENST00000411259 106 ntBASIC4.78□□□□□ -1.64
VAMP1P23763 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.78□□□□□ -1.64
VAMP1P23763 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC4.78□□□□□ -1.64
VAMP1P23763 PGBD4P6-201ENST00000421501 610 ntBASIC4.78□□□□□ -1.64
VAMP1P23763 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC4.78□□□□□ -1.64
VAMP1P23763 ELOBP4-201ENST00000423418 296 ntBASIC4.78□□□□□ -1.64
VAMP1P23763 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC4.78□□□□□ -1.64
VAMP1P23763 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.78□□□□□ -1.64
VAMP1P23763 RPL32P28-201ENST00000443577 397 ntBASIC4.78□□□□□ -1.64
VAMP1P23763 RPL37P4-201ENST00000448908 268 ntBASIC4.78□□□□□ -1.64
VAMP1P23763 AC130509.1-201ENST00000464158 433 ntBASIC4.78□□□□□ -1.64
VAMP1P23763 AC084198.1-201ENST00000477747 402 ntBASIC4.78□□□□□ -1.64
VAMP1P23763 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC4.78□□□□□ -1.64
VAMP1P23763 AC020593.1-201ENST00000507399 299 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms