Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 AC015908.1-201ENST00000478739 476 ntBASIC2.62□□□□□ -1.99
USF1P22415 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.62□□□□□ -1.99
USF1P22415 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.62□□□□□ -1.99
USF1P22415 AC026414.1-201ENST00000504046 698 ntBASIC2.62□□□□□ -1.99
USF1P22415 AC010625.1-201ENST00000511296 403 ntBASIC2.62□□□□□ -1.99
USF1P22415 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC2.62□□□□□ -1.99
USF1P22415 SNORA31.1-201ENST00000515993 133 ntBASIC2.62□□□□□ -1.99
USF1P22415 SNORA31.5-201ENST00000516190 133 ntBASIC2.62□□□□□ -1.99
USF1P22415 RNU6-56P-201ENST00000516986 93 ntBASIC2.62□□□□□ -1.99
USF1P22415 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.62□□□□□ -1.99
USF1P22415 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC2.62□□□□□ -1.99
USF1P22415 AP001804.3-201ENST00000525146 880 ntBASIC2.62□□□□□ -1.99
USF1P22415 AC068339.2-201ENST00000534395 618 ntBASIC2.62□□□□□ -1.99
USF1P22415 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC2.62□□□□□ -1.99
USF1P22415 MTATP6P2-201ENST00000603319 678 ntBASIC2.62□□□□□ -1.99
USF1P22415 RPL23AP92-201ENST00000603609 255 ntBASIC2.62□□□□□ -1.99
USF1P22415 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.62□□□□□ -1.99
USF1P22415 AC009570.1-201ENST00000609599 745 ntBASIC2.62□□□□□ -1.99
USF1P22415 AC007998.5-201ENST00000622938 237 ntBASIC2.62□□□□□ -1.99
USF1P22415 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC2.62□□□□□ -1.99
USF1P22415 AC091903.1-201ENST00000624322 454 ntBASIC2.62□□□□□ -1.99
USF1P22415 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.62□□□□□ -1.99
USF1P22415 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.62□□□□□ -1.99
USF1P22415 CUL1P1-201ENST00000509510 2425 ntBASIC2.62□□□□□ -1.99
USF1P22415 MAPK10-322ENST00000641485 4530 ntBASIC2.62□□□□□ -1.99
USF1P22415 SUCLA2P2-201ENST00000417269 1309 ntBASIC2.62□□□□□ -1.99
USF1P22415 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.62□□□□□ -1.99
USF1P22415 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
USF1P22415 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
USF1P22415 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
USF1P22415 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.61□□□□□ -1.99
USF1P22415 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
USF1P22415 SUGT1P1-201ENST00000379514 476 ntBASIC2.61□□□□□ -1.99
USF1P22415 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
USF1P22415 AL136372.1-201ENST00000403060 228 ntBASIC2.61□□□□□ -1.99
USF1P22415 U3.42-201ENST00000408746 214 ntBASIC2.61□□□□□ -1.99
USF1P22415 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.61□□□□□ -1.99
USF1P22415 RNA5SP229-201ENST00000410809 99 ntBASIC2.61□□□□□ -1.99
USF1P22415 BMS1P22-201ENST00000414726 313 ntBASIC2.61□□□□□ -1.99
USF1P22415 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC2.61□□□□□ -1.99
USF1P22415 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC2.61□□□□□ -1.99
USF1P22415 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.61□□□□□ -1.99
USF1P22415 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
USF1P22415 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.61□□□□□ -1.99
USF1P22415 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.61□□□□□ -1.99
USF1P22415 AC244505.4-201ENST00000434905 287 ntBASIC2.61□□□□□ -1.99
USF1P22415 SSXP5-201ENST00000443473 287 ntBASIC2.61□□□□□ -1.99
USF1P22415 AC017099.1-201ENST00000448261 1028 ntBASIC2.61□□□□□ -1.99
USF1P22415 COX6CP18-201ENST00000448769 222 ntBASIC2.61□□□□□ -1.99
USF1P22415 RNA5SP310-201ENST00000459084 116 ntBASIC2.61□□□□□ -1.99
USF1P22415 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.61□□□□□ -1.99
USF1P22415 AC026801.2-201ENST00000515352 425 ntBASIC2.61□□□□□ -1.99
USF1P22415 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.61□□□□□ -1.99
USF1P22415 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC2.61□□□□□ -1.99
USF1P22415 AC027309.2-201ENST00000520566 192 ntBASIC2.61□□□□□ -1.99
USF1P22415 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.61□□□□□ -1.99
USF1P22415 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.61□□□□□ -1.99
USF1P22415 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC2.61□□□□□ -1.99
USF1P22415 MED28P6-201ENST00000558776 231 ntBASIC2.61□□□□□ -1.99
USF1P22415 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC2.61□□□□□ -1.99
USF1P22415 VN1R87P-201ENST00000596706 487 ntBASIC2.61□□□□□ -1.99
USF1P22415 AC073387.2-201ENST00000604797 784 ntBASIC2.61□□□□□ -1.99
USF1P22415 AC106900.2-201ENST00000604994 317 ntBASIC2.61□□□□□ -1.99
USF1P22415 AC091946.2-201ENST00000606105 291 ntBASIC2.61□□□□□ -1.99
USF1P22415 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC2.61□□□□□ -1.99
USF1P22415 OR2AS2P-201ENST00000606902 342 ntBASIC2.61□□□□□ -1.99
USF1P22415 AC090617.7-201ENST00000623952 126 ntBASIC2.61□□□□□ -1.99
USF1P22415 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.61□□□□□ -1.99
USF1P22415 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC2.61□□□□□ -1.99
USF1P22415 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.61□□□□□ -1.99
USF1P22415 AC092435.3-201ENST00000565538 3654 ntBASIC2.61□□□□□ -1.99
USF1P22415 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
USF1P22415 ANKRD36P1-201ENST00000344424 659 ntBASIC2.6□□□□□ -1.99
USF1P22415 RNU5D-1-201ENST00000363299 116 ntBASIC2.6□□□□□ -1.99
USF1P22415 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.6□□□□□ -1.99
USF1P22415 RNU6-657P-201ENST00000383904 107 ntBASIC2.6□□□□□ -1.99
USF1P22415 RNU6-878P-201ENST00000384578 110 ntBASIC2.6□□□□□ -1.99
USF1P22415 RNU6-1300P-201ENST00000391046 108 ntBASIC2.6□□□□□ -1.99
USF1P22415 UBE2V1P2-201ENST00000397758 440 ntBASIC2.6□□□□□ -1.99
USF1P22415 RN7SKP220-201ENST00000410611 288 ntBASIC2.6□□□□□ -1.99
USF1P22415 RN7SKP58-201ENST00000411010 305 ntBASIC2.6□□□□□ -1.99
USF1P22415 RNA5SP344-201ENST00000411081 104 ntBASIC2.6□□□□□ -1.99
USF1P22415 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.6□□□□□ -1.99
USF1P22415 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC2.6□□□□□ -1.99
USF1P22415 RPL7P30-201ENST00000420888 709 ntBASIC2.6□□□□□ -1.99
USF1P22415 AC093151.1-201ENST00000427711 313 ntBASIC2.6□□□□□ -1.99
USF1P22415 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.6□□□□□ -1.99
USF1P22415 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.6□□□□□ -1.99
USF1P22415 AC004866.2-201ENST00000438285 481 ntBASIC2.6□□□□□ -1.99
USF1P22415 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.6□□□□□ -1.99
USF1P22415 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.6□□□□□ -1.99
USF1P22415 AL589880.1-201ENST00000448271 287 ntBASIC2.6□□□□□ -1.99
USF1P22415 RFC5P1-201ENST00000454419 874 ntBASIC2.6□□□□□ -1.99
USF1P22415 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC2.6□□□□□ -1.99
USF1P22415 OR2A20P-203ENST00000498397 1268 ntBASIC2.6□□□□□ -1.99
USF1P22415 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.6□□□□□ -1.99
USF1P22415 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.6□□□□□ -1.99
USF1P22415 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.6□□□□□ -1.99
USF1P22415 RNU1-143P-201ENST00000516296 146 ntBASIC2.6□□□□□ -1.99
USF1P22415 SCARNA20.6-201ENST00000517251 106 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 164.1 ms