Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 AC011611.1-201ENST00000552179 197 ntBASIC5.6□□□□□ -1.51
LMNB1P20700 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC5.6□□□□□ -1.51
LMNB1P20700 AC090615.1-201ENST00000577519 154 ntBASIC5.6□□□□□ -1.51
LMNB1P20700 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC5.6□□□□□ -1.51
LMNB1P20700 GLUD1P4-201ENST00000590914 418 ntBASIC5.6□□□□□ -1.51
LMNB1P20700 PART1_1.1-201ENST00000611761 217 ntBASIC5.6□□□□□ -1.51
LMNB1P20700 TPTEP1-208ENST00000636884 213 ntBASIC5.6□□□□□ -1.51
LMNB1P20700 MIR1302-1-201ENST00000637932 143 ntBASIC5.6□□□□□ -1.51
LMNB1P20700 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LMNB1P20700 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
LMNB1P20700 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
LMNB1P20700 ASNSP1-201ENST00000518311 1939 ntBASIC5.6□□□□□ -1.51
LMNB1P20700 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
LMNB1P20700 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
LMNB1P20700 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.6□□□□□ -1.51
LMNB1P20700 OR4G1P-203ENST00000641984 1631 ntBASIC5.59□□□□□ -1.51
LMNB1P20700 AC104260.2-201ENST00000623551 3497 ntBASIC5.59□□□□□ -1.51
LMNB1P20700 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
LMNB1P20700 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
LMNB1P20700 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
LMNB1P20700 Y_RNA.67-201ENST00000362870 100 ntBASIC5.59□□□□□ -1.51
LMNB1P20700 RNU5E-8P-201ENST00000363502 116 ntBASIC5.59□□□□□ -1.51
LMNB1P20700 Y_RNA.184-201ENST00000363884 108 ntBASIC5.59□□□□□ -1.51
LMNB1P20700 SNORA51.2-201ENST00000364595 132 ntBASIC5.59□□□□□ -1.51
LMNB1P20700 Y_RNA.367-201ENST00000365544 101 ntBASIC5.59□□□□□ -1.51
LMNB1P20700 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LMNB1P20700 MIR1302-11-201ENST00000408051 138 ntBASIC5.59□□□□□ -1.51
LMNB1P20700 MIR1302-9-201ENST00000408365 138 ntBASIC5.59□□□□□ -1.51
LMNB1P20700 MIR1302-10-201ENST00000408734 138 ntBASIC5.59□□□□□ -1.51
LMNB1P20700 RNU6-603P-201ENST00000411403 107 ntBASIC5.59□□□□□ -1.51
LMNB1P20700 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC5.59□□□□□ -1.51
LMNB1P20700 RPS26P47-201ENST00000427219 348 ntBASIC5.59□□□□□ -1.51
LMNB1P20700 ATP5JP1-201ENST00000431631 322 ntBASIC5.59□□□□□ -1.51
LMNB1P20700 AC108734.1-201ENST00000439549 399 ntBASIC5.59□□□□□ -1.51
LMNB1P20700 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC5.59□□□□□ -1.51
LMNB1P20700 AC079781.2-201ENST00000446424 169 ntBASIC5.59□□□□□ -1.51
LMNB1P20700 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LMNB1P20700 AC022690.1-201ENST00000526681 550 ntBASIC5.59□□□□□ -1.51
LMNB1P20700 AC092470.1-201ENST00000546187 132 ntBASIC5.59□□□□□ -1.51
LMNB1P20700 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC5.59□□□□□ -1.51
LMNB1P20700 MIR4286-201ENST00000580651 93 ntBASIC5.59□□□□□ -1.51
LMNB1P20700 AC243960.4-201ENST00000600532 288 ntBASIC5.59□□□□□ -1.51
LMNB1P20700 AC008739.3-201ENST00000603262 127 ntBASIC5.59□□□□□ -1.51
LMNB1P20700 MIR1302-2-201ENST00000607096 138 ntBASIC5.59□□□□□ -1.51
LMNB1P20700 OR6R2P-201ENST00000609216 300 ntBASIC5.59□□□□□ -1.51
LMNB1P20700 AC105429.2-201ENST00000610567 517 ntBASIC5.59□□□□□ -1.51
LMNB1P20700 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC5.59□□□□□ -1.51
LMNB1P20700 RMST_7.1-201ENST00000621935 268 ntBASIC5.59□□□□□ -1.51
LMNB1P20700 AC112484.5-201ENST00000624189 228 ntBASIC5.59□□□□□ -1.51
LMNB1P20700 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LMNB1P20700 EIF2AP4-201ENST00000424793 1781 ntBASIC5.59□□□□□ -1.51
LMNB1P20700 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
LMNB1P20700 AC009902.3-201ENST00000606235 2172 ntBASIC5.59□□□□□ -1.52
LMNB1P20700 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
LMNB1P20700 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
LMNB1P20700 MFSD8-242ENST00000641690 4199 ntBASIC5.58□□□□□ -1.52
LMNB1P20700 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.58□□□□□ -1.52
LMNB1P20700 OR1S2-201ENST00000302592 978 ntBASIC5.58□□□□□ -1.52
LMNB1P20700 SNORA63-201ENST00000363450 132 ntBASIC5.58□□□□□ -1.52
LMNB1P20700 Y_RNA.326-201ENST00000365176 113 ntBASIC5.58□□□□□ -1.52
LMNB1P20700 RNU6-996P-201ENST00000365438 107 ntBASIC5.58□□□□□ -1.52
LMNB1P20700 RNY3P13-201ENST00000365542 102 ntBASIC5.58□□□□□ -1.52
LMNB1P20700 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC5.58□□□□□ -1.52
LMNB1P20700 SNORA32.2-201ENST00000384049 122 ntBASIC5.58□□□□□ -1.52
LMNB1P20700 MIR19A-201ENST00000384878 82 ntBASIC5.58□□□□□ -1.52
LMNB1P20700 RN7SKP32-201ENST00000410167 303 ntBASIC5.58□□□□□ -1.52
LMNB1P20700 AF228730.4-201ENST00000421457 183 ntBASIC5.58□□□□□ -1.52
LMNB1P20700 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
LMNB1P20700 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC5.58□□□□□ -1.52
LMNB1P20700 AC127537.2-201ENST00000439258 465 ntBASIC5.58□□□□□ -1.52
LMNB1P20700 MTND6P18-201ENST00000439477 513 ntBASIC5.58□□□□□ -1.52
LMNB1P20700 MTCYBP6-201ENST00000441810 138 ntBASIC5.58□□□□□ -1.52
LMNB1P20700 AC073415.1-201ENST00000449240 153 ntBASIC5.58□□□□□ -1.52
LMNB1P20700 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.58□□□□□ -1.52
LMNB1P20700 AL356010.1-201ENST00000456364 102 ntBASIC5.58□□□□□ -1.52
LMNB1P20700 AC006512.1-201ENST00000468816 291 ntBASIC5.58□□□□□ -1.52
LMNB1P20700 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
LMNB1P20700 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
LMNB1P20700 SUMO2P20-201ENST00000520803 283 ntBASIC5.58□□□□□ -1.52
LMNB1P20700 AC103843.2-201ENST00000530523 682 ntBASIC5.58□□□□□ -1.52
LMNB1P20700 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC5.58□□□□□ -1.52
LMNB1P20700 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC5.58□□□□□ -1.52
LMNB1P20700 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.58□□□□□ -1.52
LMNB1P20700 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC5.58□□□□□ -1.52
LMNB1P20700 MTCO3P13-201ENST00000577757 781 ntBASIC5.58□□□□□ -1.52
LMNB1P20700 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC5.58□□□□□ -1.52
LMNB1P20700 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
LMNB1P20700 AP001029.3-201ENST00000588063 596 ntBASIC5.58□□□□□ -1.52
LMNB1P20700 AC025588.3-201ENST00000604182 274 ntBASIC5.58□□□□□ -1.52
LMNB1P20700 AL121992.2-201ENST00000606262 256 ntBASIC5.58□□□□□ -1.52
LMNB1P20700 AC103710.2-201ENST00000609912 942 ntBASIC5.58□□□□□ -1.52
LMNB1P20700 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC5.58□□□□□ -1.52
LMNB1P20700 MIR8059-201ENST00000620427 81 ntBASIC5.58□□□□□ -1.52
LMNB1P20700 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
LMNB1P20700 AL645937.1-201ENST00000641739 1652 ntBASIC5.58□□□□□ -1.52
LMNB1P20700 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
LMNB1P20700 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
LMNB1P20700 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
LMNB1P20700 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
LMNB1P20700 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 131.7 ms