Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
COL11A1P12107 AC000367.1-201ENST00000452711 1766 ntBASIC2.33□□□□□ -2.04
COL11A1P12107 RNU6-321P-201ENST00000410912 106 ntBASIC2.33□□□□□ -2.04
COL11A1P12107 AC013404.1-201ENST00000413068 249 ntBASIC2.33□□□□□ -2.04
COL11A1P12107 AC005005.2-201ENST00000420779 380 ntBASIC2.33□□□□□ -2.04
COL11A1P12107 MTCYBP31-201ENST00000438855 1122 ntBASIC2.33□□□□□ -2.04
COL11A1P12107 RPL21P2-201ENST00000440049 481 ntBASIC2.33□□□□□ -2.04
COL11A1P12107 RPS27P5-201ENST00000444247 244 ntBASIC2.33□□□□□ -2.04
COL11A1P12107 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC2.33□□□□□ -2.04
COL11A1P12107 SNORD13-201ENST00000459299 104 ntBASIC2.33□□□□□ -2.04
COL11A1P12107 RPL5P13-201ENST00000462840 709 ntBASIC2.33□□□□□ -2.04
COL11A1P12107 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.33□□□□□ -2.04
COL11A1P12107 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC2.33□□□□□ -2.04
COL11A1P12107 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC2.33□□□□□ -2.04
COL11A1P12107 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC2.33□□□□□ -2.04
COL11A1P12107 MIR4498-201ENST00000577599 66 ntBASIC2.33□□□□□ -2.04
COL11A1P12107 LRRC37A5P-203ENST00000580181 585 ntBASIC2.33□□□□□ -2.04
COL11A1P12107 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC2.33□□□□□ -2.04
COL11A1P12107 AC020658.4-201ENST00000613987 684 ntBASIC2.33□□□□□ -2.04
COL11A1P12107 MTND4P35-201ENST00000604257 1375 ntBASIC2.33□□□□□ -2.04
COL11A1P12107 AC096656.1-201ENST00000623826 1364 ntBASIC2.33□□□□□ -2.04
COL11A1P12107 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
COL11A1P12107 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC2.32□□□□□ -2.04
COL11A1P12107 U3.15-201ENST00000365398 212 ntBASIC2.32□□□□□ -2.04
COL11A1P12107 AC092451.1-201ENST00000480211 153 ntBASIC2.32□□□□□ -2.04
COL11A1P12107 AC087190.1-201ENST00000484462 480 ntBASIC2.32□□□□□ -2.04
COL11A1P12107 RNU6-295P-201ENST00000516901 104 ntBASIC2.32□□□□□ -2.04
COL11A1P12107 HSPE1P18-201ENST00000517602 280 ntBASIC2.32□□□□□ -2.04
COL11A1P12107 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC2.32□□□□□ -2.04
COL11A1P12107 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC2.32□□□□□ -2.04
COL11A1P12107 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC2.32□□□□□ -2.04
COL11A1P12107 FAM60CP-201ENST00000591086 664 ntBASIC2.32□□□□□ -2.04
COL11A1P12107 AC120053.1-201ENST00000607706 736 ntBASIC2.32□□□□□ -2.04
COL11A1P12107 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.32□□□□□ -2.04
COL11A1P12107 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC2.32□□□□□ -2.04
COL11A1P12107 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
COL11A1P12107 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.32□□□□□ -2.04
COL11A1P12107 AC244517.1-201ENST00000606030 2086 ntBASIC2.32□□□□□ -2.04
COL11A1P12107 ZNF271P-202ENST00000465539 1970 ntBASIC2.31□□□□□ -2.04
COL11A1P12107 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
COL11A1P12107 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
COL11A1P12107 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
COL11A1P12107 RNA5SP189-201ENST00000364920 115 ntBASIC2.31□□□□□ -2.04
COL11A1P12107 MIR9-3-201ENST00000385084 90 ntBASIC2.31□□□□□ -2.04
COL11A1P12107 EI24P1-201ENST00000416584 867 ntBASIC2.31□□□□□ -2.04
COL11A1P12107 Z82205.1-201ENST00000428456 297 ntBASIC2.31□□□□□ -2.04
COL11A1P12107 MTCO1P57-201ENST00000432182 261 ntBASIC2.31□□□□□ -2.04
COL11A1P12107 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC2.31□□□□□ -2.04
COL11A1P12107 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.31□□□□□ -2.04
COL11A1P12107 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.31□□□□□ -2.04
COL11A1P12107 AP004242.1-201ENST00000533701 349 ntBASIC2.31□□□□□ -2.04
COL11A1P12107 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.31□□□□□ -2.04
COL11A1P12107 PCNAP1-202ENST00000595299 752 ntBASIC2.31□□□□□ -2.04
COL11A1P12107 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC2.31□□□□□ -2.04
COL11A1P12107 AC093673.2-201ENST00000609674 331 ntBASIC2.31□□□□□ -2.04
COL11A1P12107 AC015726.3-201ENST00000624501 418 ntBASIC2.31□□□□□ -2.04
COL11A1P12107 SNORA50A-202ENST00000629536 136 ntBASIC2.31□□□□□ -2.04
COL11A1P12107 AC119674.1-220ENST00000641502 1048 ntBASIC2.31□□□□□ -2.04
COL11A1P12107 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
COL11A1P12107 AP005901.5-201ENST00000545779 1796 ntBASIC2.31□□□□□ -2.04
COL11A1P12107 MIR153-1-201ENST00000384914 90 ntBASIC2.31□□□□□ -2.04
COL11A1P12107 NPM1P10-201ENST00000398310 865 ntBASIC2.31□□□□□ -2.04
COL11A1P12107 BTBD10P2-201ENST00000404779 676 ntBASIC2.31□□□□□ -2.04
COL11A1P12107 LSM5-205ENST00000409952 687 ntTSL 4 BASIC2.31□□□□□ -2.04
COL11A1P12107 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.31□□□□□ -2.04
COL11A1P12107 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC2.31□□□□□ -2.04
COL11A1P12107 ELOCP11-201ENST00000436690 332 ntBASIC2.31□□□□□ -2.04
COL11A1P12107 ELOCP16-201ENST00000444494 332 ntBASIC2.31□□□□□ -2.04
COL11A1P12107 AC007677.1-201ENST00000445757 515 ntBASIC2.31□□□□□ -2.04
COL11A1P12107 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.31□□□□□ -2.04
COL11A1P12107 SNRPGP3-201ENST00000469405 227 ntBASIC2.31□□□□□ -2.04
COL11A1P12107 RPL21P103-201ENST00000479921 488 ntBASIC2.31□□□□□ -2.04
COL11A1P12107 TTC39CP1-201ENST00000512513 755 ntBASIC2.31□□□□□ -2.04
COL11A1P12107 RNA5SP445-201ENST00000515889 115 ntBASIC2.31□□□□□ -2.04
COL11A1P12107 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC2.31□□□□□ -2.04
COL11A1P12107 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.31□□□□□ -2.04
COL11A1P12107 AC068790.3-201ENST00000602988 553 ntBASIC2.31□□□□□ -2.04
COL11A1P12107 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC2.31□□□□□ -2.04
COL11A1P12107 MIR7973-1-201ENST00000614683 76 ntBASIC2.31□□□□□ -2.04
COL11A1P12107 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
COL11A1P12107 AL359893.1-201ENST00000447628 1580 ntBASIC2.3□□□□□ -2.04
COL11A1P12107 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.3□□□□□ -2.04
COL11A1P12107 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC2.3□□□□□ -2.04
COL11A1P12107 AL356292.1-201ENST00000283110 373 ntBASIC2.3□□□□□ -2.04
COL11A1P12107 RNU1-17P-201ENST00000363022 152 ntBASIC2.3□□□□□ -2.04
COL11A1P12107 Y_RNA.466-201ENST00000384294 113 ntBASIC2.3□□□□□ -2.04
COL11A1P12107 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.3□□□□□ -2.04
COL11A1P12107 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.3□□□□□ -2.04
COL11A1P12107 ARL5AP2-201ENST00000444698 533 ntBASIC2.3□□□□□ -2.04
COL11A1P12107 AC027673.1-201ENST00000456245 405 ntBASIC2.3□□□□□ -2.04
COL11A1P12107 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.3□□□□□ -2.04
COL11A1P12107 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
COL11A1P12107 RPL38P4-201ENST00000502376 214 ntBASIC2.3□□□□□ -2.04
COL11A1P12107 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC2.3□□□□□ -2.04
COL11A1P12107 HMGB3P15-201ENST00000507326 574 ntBASIC2.3□□□□□ -2.04
COL11A1P12107 AC117522.2-201ENST00000510049 657 ntBASIC2.3□□□□□ -2.04
COL11A1P12107 OR5H4P-201ENST00000510851 923 ntBASIC2.3□□□□□ -2.04
COL11A1P12107 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC2.3□□□□□ -2.04
COL11A1P12107 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.3□□□□□ -2.04
COL11A1P12107 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 127.3 ms