Protein–RNA interactions for Protein: P08670

VIM, Vimentin, humanhuman

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIMP08670 API5P2-201ENST00000397055 1498 ntBASIC3.42□□□□□ -1.86
VIMP08670 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.42□□□□□ -1.86
VIMP08670 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.42□□□□□ -1.86
VIMP08670 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
VIMP08670 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
VIMP08670 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
VIMP08670 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
VIMP08670 FRG1CP-201ENST00000358464 769 ntBASIC3.42□□□□□ -1.86
VIMP08670 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
VIMP08670 RPL21P3-201ENST00000395517 478 ntBASIC3.42□□□□□ -1.86
VIMP08670 RPL7P60-201ENST00000397636 735 ntBASIC3.42□□□□□ -1.86
VIMP08670 AL445189.1-201ENST00000405722 338 ntBASIC3.42□□□□□ -1.86
VIMP08670 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.42□□□□□ -1.86
VIMP08670 MRPL50P2-201ENST00000416821 482 ntBASIC3.42□□□□□ -1.86
VIMP08670 HSPE1P1-201ENST00000421494 318 ntBASIC3.42□□□□□ -1.86
VIMP08670 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
VIMP08670 AC024082.2-201ENST00000434771 238 ntBASIC3.42□□□□□ -1.86
VIMP08670 AC244505.4-201ENST00000434905 287 ntBASIC3.42□□□□□ -1.86
VIMP08670 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.42□□□□□ -1.86
VIMP08670 AL121871.1-201ENST00000443413 436 ntBASIC3.42□□□□□ -1.86
VIMP08670 SSXP5-201ENST00000443473 287 ntBASIC3.42□□□□□ -1.86
VIMP08670 OR6K5P-201ENST00000447050 945 ntBASIC3.42□□□□□ -1.86
VIMP08670 TPT1P12-201ENST00000448968 492 ntBASIC3.42□□□□□ -1.86
VIMP08670 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.42□□□□□ -1.86
VIMP08670 SBDSP1-204ENST00000453858 737 ntBASIC3.42□□□□□ -1.86
VIMP08670 AC146507.2-201ENST00000460608 476 ntBASIC3.42□□□□□ -1.86
VIMP08670 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
VIMP08670 AC118282.1-201ENST00000506408 765 ntBASIC3.42□□□□□ -1.86
VIMP08670 AC010460.1-201ENST00000507087 466 ntBASIC3.42□□□□□ -1.86
VIMP08670 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.42□□□□□ -1.86
VIMP08670 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.42□□□□□ -1.86
VIMP08670 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC3.42□□□□□ -1.86
VIMP08670 RNU6-528P-201ENST00000516926 100 ntBASIC3.42□□□□□ -1.86
VIMP08670 MRPS36P3-201ENST00000519284 130 ntBASIC3.42□□□□□ -1.86
VIMP08670 AC239860.2-201ENST00000525886 270 ntBASIC3.42□□□□□ -1.86
VIMP08670 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.42□□□□□ -1.86
VIMP08670 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.42□□□□□ -1.86
VIMP08670 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.42□□□□□ -1.86
VIMP08670 AL391156.1-201ENST00000554965 554 ntBASIC3.42□□□□□ -1.86
VIMP08670 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.42□□□□□ -1.86
VIMP08670 AC009097.3-201ENST00000563557 1018 ntBASIC3.42□□□□□ -1.86
VIMP08670 COX6CP3-201ENST00000580869 223 ntBASIC3.42□□□□□ -1.86
VIMP08670 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.42□□□□□ -1.86
VIMP08670 AL391001.1-201ENST00000602747 715 ntBASIC3.42□□□□□ -1.86
VIMP08670 AC013444.2-201ENST00000603317 787 ntBASIC3.42□□□□□ -1.86
VIMP08670 AC008745.1-201ENST00000604064 271 ntBASIC3.42□□□□□ -1.86
VIMP08670 AC090186.1-201ENST00000605991 572 ntBASIC3.42□□□□□ -1.86
VIMP08670 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC3.42□□□□□ -1.86
VIMP08670 AC002550.2-201ENST00000621246 394 ntBASIC3.42□□□□□ -1.86
VIMP08670 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.42□□□□□ -1.86
VIMP08670 AC073476.4-201ENST00000628409 72 ntBASIC3.42□□□□□ -1.86
VIMP08670 MIR6830-201ENST00000636015 70 ntBASIC3.42□□□□□ -1.86
VIMP08670 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
VIMP08670 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.42□□□□□ -1.86
VIMP08670 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.42□□□□□ -1.86
VIMP08670 AF117829.1-206ENST00000621883 3802 ntBASIC3.42□□□□□ -1.86
VIMP08670 AC009812.4-201ENST00000569134 1805 ntBASIC3.42□□□□□ -1.86
VIMP08670 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
VIMP08670 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
VIMP08670 TANK-205ENST00000405852 2155 ntTSL 5 BASIC3.41□□□□□ -1.86
VIMP08670 AC032011.1-201ENST00000611703 1549 ntBASIC3.41□□□□□ -1.86
VIMP08670 SPRR2C-201ENST00000290702 219 ntBASIC3.41□□□□□ -1.86
VIMP08670 SNORD113-6-201ENST00000363345 75 ntBASIC3.41□□□□□ -1.86
VIMP08670 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
VIMP08670 RNU6-1207P-201ENST00000384343 107 ntBASIC3.41□□□□□ -1.86
VIMP08670 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
VIMP08670 MTND4P13-201ENST00000402078 1023 ntBASIC3.41□□□□□ -1.86
VIMP08670 RNA5SP44-201ENST00000410446 133 ntBASIC3.41□□□□□ -1.86
VIMP08670 OR8F1P-201ENST00000425243 930 ntBASIC3.41□□□□□ -1.86
VIMP08670 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.41□□□□□ -1.86
VIMP08670 AL591419.1-201ENST00000427423 339 ntBASIC3.41□□□□□ -1.86
VIMP08670 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC3.41□□□□□ -1.86
VIMP08670 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.41□□□□□ -1.86
VIMP08670 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.41□□□□□ -1.86
VIMP08670 AL117351.1-201ENST00000438864 766 ntBASIC3.41□□□□□ -1.86
VIMP08670 THAP5P1-201ENST00000439089 262 ntBASIC3.41□□□□□ -1.86
VIMP08670 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.41□□□□□ -1.86
VIMP08670 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.41□□□□□ -1.86
VIMP08670 AC234775.1-201ENST00000454247 670 ntBASIC3.41□□□□□ -1.86
VIMP08670 AC091564.1-201ENST00000464563 479 ntBASIC3.41□□□□□ -1.86
VIMP08670 AC104563.1-201ENST00000476147 376 ntBASIC3.41□□□□□ -1.86
VIMP08670 RPL7P23-201ENST00000493874 747 ntBASIC3.41□□□□□ -1.86
VIMP08670 AC147055.4-201ENST00000504399 745 ntBASIC3.41□□□□□ -1.86
VIMP08670 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.41□□□□□ -1.86
VIMP08670 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
VIMP08670 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.41□□□□□ -1.86
VIMP08670 AC103783.1-201ENST00000520506 373 ntBASIC3.41□□□□□ -1.86
VIMP08670 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.41□□□□□ -1.86
VIMP08670 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.41□□□□□ -1.86
VIMP08670 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.41□□□□□ -1.86
VIMP08670 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC3.41□□□□□ -1.86
VIMP08670 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC3.41□□□□□ -1.86
VIMP08670 AL354943.1-201ENST00000572103 781 ntBASIC3.41□□□□□ -1.86
VIMP08670 AL031281.1-201ENST00000604049 488 ntBASIC3.41□□□□□ -1.86
VIMP08670 AC011451.2-201ENST00000604303 598 ntBASIC3.41□□□□□ -1.86
VIMP08670 AL390240.1-201ENST00000612950 384 ntBASIC3.41□□□□□ -1.86
VIMP08670 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
VIMP08670 FP236240.3-201ENST00000623061 327 ntBASIC3.41□□□□□ -1.86
VIMP08670 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.41□□□□□ -1.86
VIMP08670 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms