Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.59□□□□□ -1.67
HLA-DOAP06340 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.59□□□□□ -1.67
HLA-DOAP06340 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.59□□□□□ -1.67
HLA-DOAP06340 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC4.59□□□□□ -1.67
HLA-DOAP06340 AC034159.1-201ENST00000513885 583 ntBASIC4.59□□□□□ -1.67
HLA-DOAP06340 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC4.59□□□□□ -1.67
HLA-DOAP06340 RNA5SP164-201ENST00000516533 110 ntBASIC4.59□□□□□ -1.67
HLA-DOAP06340 RNU6-358P-201ENST00000516564 75 ntBASIC4.59□□□□□ -1.67
HLA-DOAP06340 AP003467.2-201ENST00000520175 319 ntBASIC4.59□□□□□ -1.67
HLA-DOAP06340 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC4.59□□□□□ -1.67
HLA-DOAP06340 MTND1P35-201ENST00000526739 508 ntBASIC4.59□□□□□ -1.67
HLA-DOAP06340 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.59□□□□□ -1.67
HLA-DOAP06340 AL390334.1-201ENST00000556395 450 ntBASIC4.59□□□□□ -1.67
HLA-DOAP06340 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.59□□□□□ -1.67
HLA-DOAP06340 AL117336.2-201ENST00000602435 335 ntBASIC4.59□□□□□ -1.67
HLA-DOAP06340 AL365503.1-201ENST00000605247 905 ntBASIC4.59□□□□□ -1.67
HLA-DOAP06340 AL390208.1-201ENST00000605885 644 ntBASIC4.59□□□□□ -1.67
HLA-DOAP06340 AL020991.1-201ENST00000612314 373 ntBASIC4.59□□□□□ -1.67
HLA-DOAP06340 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.59□□□□□ -1.67
HLA-DOAP06340 DLEU1_2.1-201ENST00000617920 342 ntBASIC4.59□□□□□ -1.67
HLA-DOAP06340 AC007742.2-201ENST00000618226 398 ntBASIC4.59□□□□□ -1.67
HLA-DOAP06340 AC091905.1-201ENST00000624400 311 ntBASIC4.59□□□□□ -1.67
HLA-DOAP06340 AC092326.2-201ENST00000624772 1561 ntBASIC4.59□□□□□ -1.67
HLA-DOAP06340 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.68
HLA-DOAP06340 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
HLA-DOAP06340 AC011266.1-201ENST00000624119 3569 ntBASIC4.59□□□□□ -1.68
HLA-DOAP06340 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
HLA-DOAP06340 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DOAP06340 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
HLA-DOAP06340 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DOAP06340 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
HLA-DOAP06340 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DOAP06340 U8.11-201ENST00000384699 133 ntBASIC4.58□□□□□ -1.68
HLA-DOAP06340 U8.12-201ENST00000384701 133 ntBASIC4.58□□□□□ -1.68
HLA-DOAP06340 MIR199A2-201ENST00000385289 110 ntBASIC4.58□□□□□ -1.68
HLA-DOAP06340 RPA3-203ENST00000401447 414 ntTSL 3 BASIC4.58□□□□□ -1.68
HLA-DOAP06340 RPS20P2-201ENST00000402520 389 ntBASIC4.58□□□□□ -1.68
HLA-DOAP06340 AL359704.1-201ENST00000411586 781 ntBASIC4.58□□□□□ -1.68
HLA-DOAP06340 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.58□□□□□ -1.68
HLA-DOAP06340 AC245054.1-201ENST00000420944 258 ntBASIC4.58□□□□□ -1.68
HLA-DOAP06340 AL139247.1-201ENST00000422768 325 ntBASIC4.58□□□□□ -1.68
HLA-DOAP06340 MTND1P14-201ENST00000427400 950 ntBASIC4.58□□□□□ -1.68
HLA-DOAP06340 RPL31P35-201ENST00000431058 377 ntBASIC4.58□□□□□ -1.68
HLA-DOAP06340 FCF1P1-201ENST00000432690 571 ntBASIC4.58□□□□□ -1.68
HLA-DOAP06340 UBDP1-202ENST00000457888 382 ntBASIC4.58□□□□□ -1.68
HLA-DOAP06340 U8.18-201ENST00000459285 133 ntBASIC4.58□□□□□ -1.68
HLA-DOAP06340 RBM43P1-201ENST00000476891 1081 ntBASIC4.58□□□□□ -1.68
HLA-DOAP06340 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC4.58□□□□□ -1.68
HLA-DOAP06340 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC4.58□□□□□ -1.68
HLA-DOAP06340 RNF138P1-201ENST00000502765 546 ntBASIC4.58□□□□□ -1.68
HLA-DOAP06340 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC4.58□□□□□ -1.68
HLA-DOAP06340 SCARNA14-201ENST00000516903 136 ntBASIC4.58□□□□□ -1.68
HLA-DOAP06340 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DOAP06340 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC4.58□□□□□ -1.68
HLA-DOAP06340 GLYCAM1-201ENST00000546596 285 ntBASIC4.58□□□□□ -1.68
HLA-DOAP06340 AC008127.2-201ENST00000549925 1075 ntBASIC4.58□□□□□ -1.68
HLA-DOAP06340 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC4.58□□□□□ -1.68
HLA-DOAP06340 HNRNPCP4-201ENST00000571636 900 ntBASIC4.58□□□□□ -1.68
HLA-DOAP06340 MIR4504-201ENST00000577413 92 ntBASIC4.58□□□□□ -1.68
HLA-DOAP06340 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC4.58□□□□□ -1.68
HLA-DOAP06340 AL391646.1-201ENST00000603860 190 ntBASIC4.58□□□□□ -1.68
HLA-DOAP06340 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC4.58□□□□□ -1.68
HLA-DOAP06340 AC008277.2-201ENST00000605196 797 ntBASIC4.58□□□□□ -1.68
HLA-DOAP06340 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.58□□□□□ -1.68
HLA-DOAP06340 SNORA51-201ENST00000606420 132 ntBASIC4.58□□□□□ -1.68
HLA-DOAP06340 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.58□□□□□ -1.68
HLA-DOAP06340 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.58□□□□□ -1.68
HLA-DOAP06340 AC009033.1-201ENST00000624279 431 ntBASIC4.58□□□□□ -1.68
HLA-DOAP06340 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DOAP06340 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DOAP06340 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DOAP06340 FARSBP1-201ENST00000435808 1778 ntBASIC4.58□□□□□ -1.68
HLA-DOAP06340 ZNF285B-201ENST00000561698 1767 ntBASIC4.58□□□□□ -1.68
HLA-DOAP06340 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.57□□□□□ -1.68
HLA-DOAP06340 XPOTP1-201ENST00000443317 2398 ntBASIC4.57□□□□□ -1.68
HLA-DOAP06340 AC106871.1-201ENST00000568324 3102 ntBASIC4.57□□□□□ -1.68
HLA-DOAP06340 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-DOAP06340 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-DOAP06340 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-DOAP06340 OR11H5P-202ENST00000641612 1325 ntBASIC4.57□□□□□ -1.68
HLA-DOAP06340 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
HLA-DOAP06340 RNU1-108P-201ENST00000362556 161 ntBASIC4.57□□□□□ -1.68
HLA-DOAP06340 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.57□□□□□ -1.68
HLA-DOAP06340 RNU6-343P-201ENST00000364709 104 ntBASIC4.57□□□□□ -1.68
HLA-DOAP06340 RNU6-282P-201ENST00000365357 103 ntBASIC4.57□□□□□ -1.68
HLA-DOAP06340 Y_RNA.381-201ENST00000365666 102 ntBASIC4.57□□□□□ -1.68
HLA-DOAP06340 AMD1P2-201ENST00000412936 992 ntBASIC4.57□□□□□ -1.68
HLA-DOAP06340 JKAMPP1-201ENST00000413804 919 ntBASIC4.57□□□□□ -1.68
HLA-DOAP06340 USP9YP27-201ENST00000418455 438 ntBASIC4.57□□□□□ -1.68
HLA-DOAP06340 AC099336.2-201ENST00000422457 254 ntBASIC4.57□□□□□ -1.68
HLA-DOAP06340 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.57□□□□□ -1.68
HLA-DOAP06340 AC092013.1-201ENST00000438795 332 ntBASIC4.57□□□□□ -1.68
HLA-DOAP06340 RPL23AP16-201ENST00000441715 421 ntBASIC4.57□□□□□ -1.68
HLA-DOAP06340 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC4.57□□□□□ -1.68
HLA-DOAP06340 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
HLA-DOAP06340 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.57□□□□□ -1.68
HLA-DOAP06340 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.57□□□□□ -1.68
HLA-DOAP06340 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC4.57□□□□□ -1.68
HLA-DOAP06340 C1DP4-201ENST00000455429 424 ntBASIC4.57□□□□□ -1.68
HLA-DOAP06340 AC099560.2-201ENST00000457554 255 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms