Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 DNAJC19P6-201ENST00000401853 280 ntBASIC3.56□□□□□ -1.84
COL5A2P05997 RNA5SP293-201ENST00000410527 113 ntBASIC3.56□□□□□ -1.84
COL5A2P05997 RHEBP3-201ENST00000411920 351 ntBASIC3.56□□□□□ -1.84
COL5A2P05997 HMGB3P31-201ENST00000413333 595 ntBASIC3.56□□□□□ -1.84
COL5A2P05997 ELOCP9-201ENST00000418624 239 ntBASIC3.56□□□□□ -1.84
COL5A2P05997 GTF2IP23-201ENST00000423746 351 ntBASIC3.56□□□□□ -1.84
COL5A2P05997 ZYG11AP1-201ENST00000430329 837 ntBASIC3.56□□□□□ -1.84
COL5A2P05997 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.56□□□□□ -1.84
COL5A2P05997 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC3.56□□□□□ -1.84
COL5A2P05997 COX7BP2-201ENST00000437976 242 ntBASIC3.56□□□□□ -1.84
COL5A2P05997 MTND1P34-201ENST00000438556 671 ntBASIC3.56□□□□□ -1.84
COL5A2P05997 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC3.56□□□□□ -1.84
COL5A2P05997 AC118469.1-201ENST00000442943 488 ntBASIC3.56□□□□□ -1.84
COL5A2P05997 AC097499.1-201ENST00000444277 208 ntBASIC3.56□□□□□ -1.84
COL5A2P05997 AL035407.2-201ENST00000454090 378 ntBASIC3.56□□□□□ -1.84
COL5A2P05997 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
COL5A2P05997 RNU6-599P-201ENST00000459383 107 ntBASIC3.56□□□□□ -1.84
COL5A2P05997 RNU6-1193P-201ENST00000459461 107 ntBASIC3.56□□□□□ -1.84
COL5A2P05997 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC3.56□□□□□ -1.84
COL5A2P05997 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC3.56□□□□□ -1.84
COL5A2P05997 SNORA64.4-201ENST00000516632 81 ntBASIC3.56□□□□□ -1.84
COL5A2P05997 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.56□□□□□ -1.84
COL5A2P05997 RPL7P20-201ENST00000520308 745 ntBASIC3.56□□□□□ -1.84
COL5A2P05997 HMGB1P1-201ENST00000522557 636 ntBASIC3.56□□□□□ -1.84
COL5A2P05997 IGKV3-31-201ENST00000523109 329 ntBASIC3.56□□□□□ -1.84
COL5A2P05997 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.56□□□□□ -1.84
COL5A2P05997 DEFB130C-202ENST00000530001 230 ntBASIC3.56□□□□□ -1.84
COL5A2P05997 AC007424.1-203ENST00000554613 687 ntBASIC3.56□□□□□ -1.84
COL5A2P05997 AP001269.3-201ENST00000588718 329 ntBASIC3.56□□□□□ -1.84
COL5A2P05997 AC090425.2-201ENST00000608818 501 ntBASIC3.56□□□□□ -1.84
COL5A2P05997 AC019131.2-201ENST00000609071 870 ntBASIC3.56□□□□□ -1.84
COL5A2P05997 RNU6-368P-201ENST00000620928 107 ntBASIC3.56□□□□□ -1.84
COL5A2P05997 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC3.56□□□□□ -1.84
COL5A2P05997 RNU6-538P-201ENST00000622329 107 ntBASIC3.56□□□□□ -1.84
COL5A2P05997 AC091931.1-201ENST00000623488 728 ntBASIC3.56□□□□□ -1.84
COL5A2P05997 AC103706.2-201ENST00000638080 240 ntBASIC3.56□□□□□ -1.84
COL5A2P05997 AP006437.1-201ENST00000641440 3685 ntBASIC3.56□□□□□ -1.84
COL5A2P05997 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.56□□□□□ -1.84
COL5A2P05997 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
COL5A2P05997 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
COL5A2P05997 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
COL5A2P05997 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
COL5A2P05997 RNU6-353P-201ENST00000364266 108 ntBASIC3.55□□□□□ -1.84
COL5A2P05997 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.55□□□□□ -1.84
COL5A2P05997 AL138878.1-201ENST00000405131 347 ntBASIC3.55□□□□□ -1.84
COL5A2P05997 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC3.55□□□□□ -1.84
COL5A2P05997 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC3.55□□□□□ -1.84
COL5A2P05997 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.55□□□□□ -1.84
COL5A2P05997 BTF3L4P1-201ENST00000413813 468 ntBASIC3.55□□□□□ -1.84
COL5A2P05997 TIMM9P2-201ENST00000419324 266 ntBASIC3.55□□□□□ -1.84
COL5A2P05997 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC3.55□□□□□ -1.84
COL5A2P05997 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.55□□□□□ -1.84
COL5A2P05997 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC3.55□□□□□ -1.84
COL5A2P05997 MTND2P4-201ENST00000445034 1004 ntBASIC3.55□□□□□ -1.84
COL5A2P05997 WASF1P1-201ENST00000447560 1131 ntBASIC3.55□□□□□ -1.84
COL5A2P05997 MTND1P29-201ENST00000448112 647 ntBASIC3.55□□□□□ -1.84
COL5A2P05997 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC3.55□□□□□ -1.84
COL5A2P05997 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
COL5A2P05997 RNU6-1129P-201ENST00000515964 104 ntBASIC3.55□□□□□ -1.84
COL5A2P05997 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC3.55□□□□□ -1.84
COL5A2P05997 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.55□□□□□ -1.84
COL5A2P05997 MTCO3P15-201ENST00000526563 574 ntBASIC3.55□□□□□ -1.84
COL5A2P05997 AP000873.5-201ENST00000533906 236 ntBASIC3.55□□□□□ -1.84
COL5A2P05997 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
COL5A2P05997 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC3.55□□□□□ -1.84
COL5A2P05997 ELOCP32-201ENST00000548625 324 ntBASIC3.55□□□□□ -1.84
COL5A2P05997 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.55□□□□□ -1.84
COL5A2P05997 AC068446.3-201ENST00000555285 382 ntBASIC3.55□□□□□ -1.84
COL5A2P05997 AL049870.4-201ENST00000555741 486 ntBASIC3.55□□□□□ -1.84
COL5A2P05997 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.55□□□□□ -1.84
COL5A2P05997 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.55□□□□□ -1.84
COL5A2P05997 AC090888.1-201ENST00000561335 1141 ntBASIC3.55□□□□□ -1.84
COL5A2P05997 MTND4LP24-201ENST00000572277 291 ntBASIC3.55□□□□□ -1.84
COL5A2P05997 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.55□□□□□ -1.84
COL5A2P05997 AC022069.1-201ENST00000582910 658 ntBASIC3.55□□□□□ -1.84
COL5A2P05997 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.55□□□□□ -1.84
COL5A2P05997 NBR2-204ENST00000587322 63 ntBASIC3.55□□□□□ -1.84
COL5A2P05997 VN1R83P-201ENST00000595685 445 ntBASIC3.55□□□□□ -1.84
COL5A2P05997 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.55□□□□□ -1.84
COL5A2P05997 AL603755.1-201ENST00000619504 163 ntBASIC3.55□□□□□ -1.84
COL5A2P05997 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.55□□□□□ -1.84
COL5A2P05997 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.55□□□□□ -1.84
COL5A2P05997 AC025034.2-201ENST00000623264 286 ntBASIC3.55□□□□□ -1.84
COL5A2P05997 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
COL5A2P05997 MTND4P5-201ENST00000435821 1374 ntBASIC3.55□□□□□ -1.84
COL5A2P05997 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.55□□□□□ -1.84
COL5A2P05997 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
COL5A2P05997 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
COL5A2P05997 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
COL5A2P05997 FAM133CP-201ENST00000332869 704 ntBASIC3.54□□□□□ -1.84
COL5A2P05997 MIR26A1-201ENST00000362205 77 ntBASIC3.54□□□□□ -1.84
COL5A2P05997 MIR592-201ENST00000384959 97 ntBASIC3.54□□□□□ -1.84
COL5A2P05997 TEX41-202ENST00000414256 604 ntTSL 5 BASIC3.54□□□□□ -1.84
COL5A2P05997 LINC01347-201ENST00000417964 355 ntBASIC3.54□□□□□ -1.84
COL5A2P05997 RPS12P23-201ENST00000419579 400 ntBASIC3.54□□□□□ -1.84
COL5A2P05997 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.54□□□□□ -1.84
COL5A2P05997 AL593851.1-201ENST00000426171 157 ntBASIC3.54□□□□□ -1.84
COL5A2P05997 RPS26P40-201ENST00000435209 294 ntBASIC3.54□□□□□ -1.84
COL5A2P05997 AC092170.1-201ENST00000440211 356 ntBASIC3.54□□□□□ -1.84
COL5A2P05997 RPL34P26-201ENST00000445636 354 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms