Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 AC040168.1-201ENST00000623594 991 ntBASIC3.3□□□□□ -1.88
CHRNA1P02708 AC073476.4-201ENST00000628409 72 ntBASIC3.3□□□□□ -1.88
CHRNA1P02708 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.3□□□□□ -1.88
CHRNA1P02708 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.3□□□□□ -1.88
CHRNA1P02708 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.3□□□□□ -1.88
CHRNA1P02708 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.3□□□□□ -1.88
CHRNA1P02708 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.29□□□□□ -1.88
CHRNA1P02708 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.29□□□□□ -1.88
CHRNA1P02708 FAM35CP-201ENST00000554755 2470 ntBASIC3.29□□□□□ -1.88
CHRNA1P02708 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CHRNA1P02708 SUGT1P1-201ENST00000379514 476 ntBASIC3.29□□□□□ -1.88
CHRNA1P02708 AL079342.2-201ENST00000403367 482 ntBASIC3.29□□□□□ -1.88
CHRNA1P02708 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.29□□□□□ -1.88
CHRNA1P02708 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CHRNA1P02708 MTND4P3-201ENST00000417829 541 ntBASIC3.29□□□□□ -1.88
CHRNA1P02708 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.29□□□□□ -1.88
CHRNA1P02708 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.29□□□□□ -1.88
CHRNA1P02708 RPL23AP22-201ENST00000437556 453 ntBASIC3.29□□□□□ -1.88
CHRNA1P02708 AC093156.1-201ENST00000440382 670 ntBASIC3.29□□□□□ -1.88
CHRNA1P02708 COX6CP18-201ENST00000448769 222 ntBASIC3.29□□□□□ -1.88
CHRNA1P02708 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.29□□□□□ -1.88
CHRNA1P02708 FCF1P6-201ENST00000456841 595 ntBASIC3.29□□□□□ -1.88
CHRNA1P02708 AC069528.1-202ENST00000482888 637 ntBASIC3.29□□□□□ -1.88
CHRNA1P02708 AC118942.1-201ENST00000529674 1035 ntBASIC3.29□□□□□ -1.88
CHRNA1P02708 DEFB130C-202ENST00000530001 230 ntBASIC3.29□□□□□ -1.88
CHRNA1P02708 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.29□□□□□ -1.88
CHRNA1P02708 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CHRNA1P02708 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.29□□□□□ -1.88
CHRNA1P02708 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.29□□□□□ -1.88
CHRNA1P02708 AP001029.3-201ENST00000588063 596 ntBASIC3.29□□□□□ -1.88
CHRNA1P02708 ELOCP29-201ENST00000588193 334 ntBASIC3.29□□□□□ -1.88
CHRNA1P02708 AC073387.2-201ENST00000604797 784 ntBASIC3.29□□□□□ -1.88
CHRNA1P02708 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.29□□□□□ -1.88
CHRNA1P02708 AC068831.7-201ENST00000616954 363 ntBASIC3.29□□□□□ -1.88
CHRNA1P02708 AC018755.4-201ENST00000619715 454 ntBASIC3.29□□□□□ -1.88
CHRNA1P02708 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.29□□□□□ -1.88
CHRNA1P02708 CYP3A51P-201ENST00000633513 256 ntBASIC3.29□□□□□ -1.88
CHRNA1P02708 MFSD8-245ENST00000641743 948 ntBASIC3.29□□□□□ -1.88
CHRNA1P02708 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
CHRNA1P02708 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
CHRNA1P02708 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CHRNA1P02708 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.28□□□□□ -1.88
CHRNA1P02708 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
CHRNA1P02708 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
CHRNA1P02708 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.28□□□□□ -1.88
CHRNA1P02708 RPS3AP26-201ENST00000398259 784 ntBASIC3.28□□□□□ -1.88
CHRNA1P02708 AL591034.1-201ENST00000407447 340 ntBASIC3.28□□□□□ -1.88
CHRNA1P02708 RNU4-65P-201ENST00000410473 140 ntBASIC3.28□□□□□ -1.88
CHRNA1P02708 USP9YP21-201ENST00000420603 432 ntBASIC3.28□□□□□ -1.88
CHRNA1P02708 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.28□□□□□ -1.88
CHRNA1P02708 SEPT7P5-201ENST00000434048 306 ntBASIC3.28□□□□□ -1.88
CHRNA1P02708 SDR42E1P3-201ENST00000438345 502 ntBASIC3.28□□□□□ -1.88
CHRNA1P02708 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC3.28□□□□□ -1.88
CHRNA1P02708 RPS12P18-201ENST00000442381 270 ntBASIC3.28□□□□□ -1.88
CHRNA1P02708 RPL37P4-201ENST00000448908 268 ntBASIC3.28□□□□□ -1.88
CHRNA1P02708 PNPLA4P1-201ENST00000458328 305 ntBASIC3.28□□□□□ -1.88
CHRNA1P02708 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.28□□□□□ -1.88
CHRNA1P02708 AC083906.5-201ENST00000503722 328 ntBASIC3.28□□□□□ -1.88
CHRNA1P02708 HIGD1AP13-201ENST00000509878 289 ntBASIC3.28□□□□□ -1.88
CHRNA1P02708 RNU6-276P-201ENST00000516114 96 ntBASIC3.28□□□□□ -1.88
CHRNA1P02708 RN7SKP282-201ENST00000516824 299 ntBASIC3.28□□□□□ -1.88
CHRNA1P02708 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.28□□□□□ -1.88
CHRNA1P02708 AP001207.2-201ENST00000519490 539 ntBASIC3.28□□□□□ -1.88
CHRNA1P02708 AC068657.1-201ENST00000520807 306 ntBASIC3.28□□□□□ -1.88
CHRNA1P02708 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.28□□□□□ -1.88
CHRNA1P02708 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3.28□□□□□ -1.88
CHRNA1P02708 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CHRNA1P02708 CYCSP39-201ENST00000565821 309 ntBASIC3.28□□□□□ -1.88
CHRNA1P02708 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.28□□□□□ -1.88
CHRNA1P02708 AL606834.3-201ENST00000602615 496 ntBASIC3.28□□□□□ -1.88
CHRNA1P02708 XIAPP1-201ENST00000603162 600 ntBASIC3.28□□□□□ -1.88
CHRNA1P02708 AC055876.5-201ENST00000605667 259 ntBASIC3.28□□□□□ -1.88
CHRNA1P02708 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC3.28□□□□□ -1.88
CHRNA1P02708 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.28□□□□□ -1.88
CHRNA1P02708 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.28□□□□□ -1.88
CHRNA1P02708 AC007318.2-201ENST00000620999 243 ntBASIC3.28□□□□□ -1.88
CHRNA1P02708 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.28□□□□□ -1.88
CHRNA1P02708 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CHRNA1P02708 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CHRNA1P02708 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
CHRNA1P02708 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
CHRNA1P02708 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
CHRNA1P02708 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
CHRNA1P02708 RNU6-707P-201ENST00000364647 95 ntBASIC3.27□□□□□ -1.89
CHRNA1P02708 SNORA18.3-201ENST00000384122 132 ntBASIC3.27□□□□□ -1.89
CHRNA1P02708 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.27□□□□□ -1.89
CHRNA1P02708 RNU6-712P-201ENST00000410558 100 ntBASIC3.27□□□□□ -1.89
CHRNA1P02708 AC245291.1-201ENST00000419501 328 ntBASIC3.27□□□□□ -1.89
CHRNA1P02708 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC3.27□□□□□ -1.89
CHRNA1P02708 RAC1P8-201ENST00000427086 527 ntBASIC3.27□□□□□ -1.89
CHRNA1P02708 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.27□□□□□ -1.89
CHRNA1P02708 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.27□□□□□ -1.89
CHRNA1P02708 ISCA1P2-201ENST00000438679 421 ntBASIC3.27□□□□□ -1.89
CHRNA1P02708 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.27□□□□□ -1.89
CHRNA1P02708 RPL36AP33-201ENST00000450395 310 ntBASIC3.27□□□□□ -1.89
CHRNA1P02708 HMGN1P18-201ENST00000457642 277 ntBASIC3.27□□□□□ -1.89
CHRNA1P02708 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.27□□□□□ -1.89
CHRNA1P02708 AC079203.1-201ENST00000487972 404 ntBASIC3.27□□□□□ -1.89
CHRNA1P02708 RN7SL20P-201ENST00000488827 297 ntBASIC3.27□□□□□ -1.89
CHRNA1P02708 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms