Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
PDGFBP01127 AC109315.1-201ENST00000584143 1347 ntBASIC3.4□□□□□ -1.87
PDGFBP01127 AC090740.1-201ENST00000623193 2262 ntBASIC3.4□□□□□ -1.87
PDGFBP01127 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
PDGFBP01127 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.39□□□□□ -1.87
PDGFBP01127 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
PDGFBP01127 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
PDGFBP01127 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PDGFBP01127 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
PDGFBP01127 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PDGFBP01127 OR5J1P-201ENST00000313544 939 ntBASIC3.39□□□□□ -1.87
PDGFBP01127 RNU5D-1-201ENST00000363299 116 ntBASIC3.39□□□□□ -1.87
PDGFBP01127 SNRPEP2-201ENST00000397592 279 ntBASIC3.39□□□□□ -1.87
PDGFBP01127 RPS3AP26-201ENST00000398259 784 ntBASIC3.39□□□□□ -1.87
PDGFBP01127 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC3.39□□□□□ -1.87
PDGFBP01127 AL513175.2-201ENST00000422071 443 ntBASIC3.39□□□□□ -1.87
PDGFBP01127 GLRXP1-201ENST00000423261 334 ntBASIC3.39□□□□□ -1.87
PDGFBP01127 AC011742.1-201ENST00000431448 434 ntBASIC3.39□□□□□ -1.87
PDGFBP01127 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC3.39□□□□□ -1.87
PDGFBP01127 GTF2IP7-202ENST00000436677 309 ntBASIC3.39□□□□□ -1.87
PDGFBP01127 AC004866.2-201ENST00000438285 481 ntBASIC3.39□□□□□ -1.87
PDGFBP01127 AL356535.1-201ENST00000440335 398 ntBASIC3.39□□□□□ -1.87
PDGFBP01127 FGF7P5-201ENST00000441829 291 ntBASIC3.39□□□□□ -1.87
PDGFBP01127 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.39□□□□□ -1.87
PDGFBP01127 USP9YP34-201ENST00000453983 808 ntBASIC3.39□□□□□ -1.87
PDGFBP01127 Y_RNA.638-201ENST00000459374 113 ntBASIC3.39□□□□□ -1.87
PDGFBP01127 AC023598.1-201ENST00000472521 361 ntBASIC3.39□□□□□ -1.87
PDGFBP01127 AC108729.1-201ENST00000487812 947 ntBASIC3.39□□□□□ -1.87
PDGFBP01127 AC069499.1-201ENST00000489433 509 ntBASIC3.39□□□□□ -1.87
PDGFBP01127 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PDGFBP01127 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC3.39□□□□□ -1.87
PDGFBP01127 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.39□□□□□ -1.87
PDGFBP01127 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.39□□□□□ -1.87
PDGFBP01127 ARL2BPP6-201ENST00000512757 439 ntBASIC3.39□□□□□ -1.87
PDGFBP01127 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.39□□□□□ -1.87
PDGFBP01127 RNU6-311P-201ENST00000516224 102 ntBASIC3.39□□□□□ -1.87
PDGFBP01127 NARSP2-201ENST00000518524 679 ntBASIC3.39□□□□□ -1.87
PDGFBP01127 AP001372.4-201ENST00000524889 472 ntBASIC3.39□□□□□ -1.87
PDGFBP01127 AP001636.2-201ENST00000525517 696 ntBASIC3.39□□□□□ -1.87
PDGFBP01127 AP002404.1-201ENST00000532005 451 ntBASIC3.39□□□□□ -1.87
PDGFBP01127 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.39□□□□□ -1.87
PDGFBP01127 AC010198.2-201ENST00000550612 259 ntBASIC3.39□□□□□ -1.87
PDGFBP01127 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.39□□□□□ -1.87
PDGFBP01127 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.39□□□□□ -1.87
PDGFBP01127 MIR5047-201ENST00000579212 100 ntBASIC3.39□□□□□ -1.87
PDGFBP01127 MIR3162-201ENST00000581818 82 ntBASIC3.39□□□□□ -1.87
PDGFBP01127 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.39□□□□□ -1.87
PDGFBP01127 AC016877.3-201ENST00000606778 504 ntBASIC3.39□□□□□ -1.87
PDGFBP01127 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC3.39□□□□□ -1.87
PDGFBP01127 AC106028.5-201ENST00000610332 395 ntBASIC3.39□□□□□ -1.87
PDGFBP01127 AC023510.2-201ENST00000622162 746 ntBASIC3.39□□□□□ -1.87
PDGFBP01127 AL356585.4-201ENST00000623078 1229 ntBASIC3.39□□□□□ -1.87
PDGFBP01127 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC3.39□□□□□ -1.87
PDGFBP01127 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
PDGFBP01127 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
PDGFBP01127 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.39□□□□□ -1.87
PDGFBP01127 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
PDGFBP01127 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
PDGFBP01127 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PDGFBP01127 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
PDGFBP01127 AC021755.1-201ENST00000559747 1447 ntBASIC3.38□□□□□ -1.87
PDGFBP01127 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
PDGFBP01127 MIR513B-201ENST00000385136 84 ntBASIC3.38□□□□□ -1.87
PDGFBP01127 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC3.38□□□□□ -1.87
PDGFBP01127 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC3.38□□□□□ -1.87
PDGFBP01127 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
PDGFBP01127 BX890604.2-201ENST00000427883 474 ntBASIC3.38□□□□□ -1.87
PDGFBP01127 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.38□□□□□ -1.87
PDGFBP01127 RABEPKP1-201ENST00000440529 1026 ntBASIC3.38□□□□□ -1.87
PDGFBP01127 RPL17P49-201ENST00000443728 411 ntBASIC3.38□□□□□ -1.87
PDGFBP01127 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.38□□□□□ -1.87
PDGFBP01127 SUMO2P2-201ENST00000456482 255 ntBASIC3.38□□□□□ -1.87
PDGFBP01127 RPL31P50-201ENST00000471002 296 ntBASIC3.38□□□□□ -1.87
PDGFBP01127 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.38□□□□□ -1.87
PDGFBP01127 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.38□□□□□ -1.87
PDGFBP01127 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.38□□□□□ -1.87
PDGFBP01127 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.38□□□□□ -1.87
PDGFBP01127 RNU6-579P-201ENST00000516879 102 ntBASIC3.38□□□□□ -1.87
PDGFBP01127 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.38□□□□□ -1.87
PDGFBP01127 AP001804.3-201ENST00000525146 880 ntBASIC3.38□□□□□ -1.87
PDGFBP01127 GTF3AP2-201ENST00000557014 266 ntBASIC3.38□□□□□ -1.87
PDGFBP01127 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC3.38□□□□□ -1.87
PDGFBP01127 AL132657.2-201ENST00000564417 358 ntBASIC3.38□□□□□ -1.87
PDGFBP01127 AP001269.3-201ENST00000588718 329 ntBASIC3.38□□□□□ -1.87
PDGFBP01127 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.38□□□□□ -1.87
PDGFBP01127 BDH2P1-201ENST00000602288 736 ntBASIC3.38□□□□□ -1.87
PDGFBP01127 AC006557.5-201ENST00000603126 811 ntBASIC3.38□□□□□ -1.87
PDGFBP01127 AC080013.4-201ENST00000607624 649 ntBASIC3.38□□□□□ -1.87
PDGFBP01127 AC068831.7-201ENST00000616954 363 ntBASIC3.38□□□□□ -1.87
PDGFBP01127 AC002076.2-201ENST00000617362 122 ntBASIC3.38□□□□□ -1.87
PDGFBP01127 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
PDGFBP01127 AC091905.1-201ENST00000624400 311 ntBASIC3.38□□□□□ -1.87
PDGFBP01127 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC3.38□□□□□ -1.87
PDGFBP01127 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC3.38□□□□□ -1.87
PDGFBP01127 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.38□□□□□ -1.87
PDGFBP01127 IGHVIII-44-202ENST00000636235 289 ntBASIC3.38□□□□□ -1.87
PDGFBP01127 U6.101-201ENST00000637707 76 ntBASIC3.38□□□□□ -1.87
PDGFBP01127 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
PDGFBP01127 AL136360.1-201ENST00000503377 1900 ntBASIC3.38□□□□□ -1.87
PDGFBP01127 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 134.4 ms