Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.93□□□□□ -1.94
CLDN9O95484 AC125611.1-201ENST00000549563 229 ntBASIC2.93□□□□□ -1.94
CLDN9O95484 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.93□□□□□ -1.94
CLDN9O95484 AC055876.1-202ENST00000567053 138 ntBASIC2.93□□□□□ -1.94
CLDN9O95484 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.93□□□□□ -1.94
CLDN9O95484 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.93□□□□□ -1.94
CLDN9O95484 AC005000.2-201ENST00000605468 310 ntBASIC2.93□□□□□ -1.94
CLDN9O95484 AL451074.6-201ENST00000608512 729 ntBASIC2.93□□□□□ -1.94
CLDN9O95484 AC006111.3-201ENST00000622137 383 ntBASIC2.93□□□□□ -1.94
CLDN9O95484 AC090897.3-201ENST00000636973 1157 ntBASIC2.93□□□□□ -1.94
CLDN9O95484 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
CLDN9O95484 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CLDN9O95484 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
CLDN9O95484 MTND5P19-201ENST00000424872 1794 ntBASIC2.92□□□□□ -1.94
CLDN9O95484 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
CLDN9O95484 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
CLDN9O95484 MIR22-201ENST00000362190 85 ntBASIC2.92□□□□□ -1.94
CLDN9O95484 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
CLDN9O95484 MIR506-201ENST00000384998 124 ntBASIC2.92□□□□□ -1.94
CLDN9O95484 MIR493-201ENST00000385254 89 ntBASIC2.92□□□□□ -1.94
CLDN9O95484 RNU2-47P-201ENST00000410649 186 ntBASIC2.92□□□□□ -1.94
CLDN9O95484 MRPL50P2-201ENST00000416821 482 ntBASIC2.92□□□□□ -1.94
CLDN9O95484 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC2.92□□□□□ -1.94
CLDN9O95484 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CLDN9O95484 AC004866.2-201ENST00000438285 481 ntBASIC2.92□□□□□ -1.94
CLDN9O95484 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC2.92□□□□□ -1.94
CLDN9O95484 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC2.92□□□□□ -1.94
CLDN9O95484 RPL36AP33-201ENST00000450395 310 ntBASIC2.92□□□□□ -1.94
CLDN9O95484 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.92□□□□□ -1.94
CLDN9O95484 AC108860.1-201ENST00000484521 383 ntBASIC2.92□□□□□ -1.94
CLDN9O95484 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC2.92□□□□□ -1.94
CLDN9O95484 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.92□□□□□ -1.94
CLDN9O95484 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC2.92□□□□□ -1.94
CLDN9O95484 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.92□□□□□ -1.94
CLDN9O95484 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.92□□□□□ -1.94
CLDN9O95484 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.92□□□□□ -1.94
CLDN9O95484 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CLDN9O95484 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CLDN9O95484 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC2.92□□□□□ -1.94
CLDN9O95484 AC106782.4-201ENST00000568264 210 ntBASIC2.92□□□□□ -1.94
CLDN9O95484 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.92□□□□□ -1.94
CLDN9O95484 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.92□□□□□ -1.94
CLDN9O95484 AC245036.5-201ENST00000596330 847 ntBASIC2.92□□□□□ -1.94
CLDN9O95484 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC2.92□□□□□ -1.94
CLDN9O95484 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.92□□□□□ -1.94
CLDN9O95484 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC2.92□□□□□ -1.94
CLDN9O95484 MIR3651-201ENST00000630427 90 ntBASIC2.92□□□□□ -1.94
CLDN9O95484 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
CLDN9O95484 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
CLDN9O95484 OR4G11P-202ENST00000642116 1414 ntBASIC2.92□□□□□ -1.94
CLDN9O95484 FAM35CP-201ENST00000554755 2470 ntBASIC2.92□□□□□ -1.94
CLDN9O95484 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC2.92□□□□□ -1.94
CLDN9O95484 AL353743.1-202ENST00000431724 1695 ntBASIC2.92□□□□□ -1.94
CLDN9O95484 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CLDN9O95484 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CLDN9O95484 AC073325.2-201ENST00000339545 159 ntBASIC2.91□□□□□ -1.94
CLDN9O95484 RNU2-42P-201ENST00000410697 113 ntBASIC2.91□□□□□ -1.94
CLDN9O95484 AC096664.2-201ENST00000411843 406 ntBASIC2.91□□□□□ -1.94
CLDN9O95484 NDUFB4P5-201ENST00000415445 361 ntBASIC2.91□□□□□ -1.94
CLDN9O95484 SSXP9-201ENST00000417503 292 ntBASIC2.91□□□□□ -1.94
CLDN9O95484 AC019178.2-201ENST00000423595 505 ntBASIC2.91□□□□□ -1.94
CLDN9O95484 RPL23AP74-201ENST00000437246 471 ntBASIC2.91□□□□□ -1.94
CLDN9O95484 AC009969.1-201ENST00000438726 172 ntBASIC2.91□□□□□ -1.94
CLDN9O95484 AC092427.1-201ENST00000439177 601 ntBASIC2.91□□□□□ -1.94
CLDN9O95484 TRIM60P18-201ENST00000441518 828 ntBASIC2.91□□□□□ -1.94
CLDN9O95484 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC2.91□□□□□ -1.94
CLDN9O95484 RPL39P6-201ENST00000448289 150 ntBASIC2.91□□□□□ -1.94
CLDN9O95484 AC140076.1-201ENST00000449897 361 ntBASIC2.91□□□□□ -1.94
CLDN9O95484 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
CLDN9O95484 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.91□□□□□ -1.94
CLDN9O95484 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.91□□□□□ -1.94
CLDN9O95484 PNPLA4P1-201ENST00000458328 305 ntBASIC2.91□□□□□ -1.94
CLDN9O95484 RPS15AP17-201ENST00000470598 390 ntBASIC2.91□□□□□ -1.94
CLDN9O95484 RN7SL807P-201ENST00000470923 297 ntBASIC2.91□□□□□ -1.94
CLDN9O95484 RPL7P23-201ENST00000493874 747 ntBASIC2.91□□□□□ -1.94
CLDN9O95484 AC104629.1-201ENST00000494226 508 ntBASIC2.91□□□□□ -1.94
CLDN9O95484 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC2.91□□□□□ -1.94
CLDN9O95484 SUMO2P5-201ENST00000506790 245 ntBASIC2.91□□□□□ -1.94
CLDN9O95484 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC2.91□□□□□ -1.94
CLDN9O95484 SNORD59.2-201ENST00000516873 68 ntBASIC2.91□□□□□ -1.94
CLDN9O95484 RN7SKP272-201ENST00000516988 232 ntBASIC2.91□□□□□ -1.94
CLDN9O95484 RN7SKP57-201ENST00000517248 293 ntBASIC2.91□□□□□ -1.94
CLDN9O95484 AC090136.1-201ENST00000520009 240 ntBASIC2.91□□□□□ -1.94
CLDN9O95484 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC2.91□□□□□ -1.94
CLDN9O95484 SETP7-201ENST00000552169 453 ntBASIC2.91□□□□□ -1.94
CLDN9O95484 AP005205.1-201ENST00000563503 508 ntBASIC2.91□□□□□ -1.94
CLDN9O95484 AC005951.1-201ENST00000576706 485 ntBASIC2.91□□□□□ -1.94
CLDN9O95484 MAGOH2P-202ENST00000584384 429 ntBASIC2.91□□□□□ -1.94
CLDN9O95484 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC2.91□□□□□ -1.94
CLDN9O95484 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.91□□□□□ -1.94
CLDN9O95484 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC2.91□□□□□ -1.94
CLDN9O95484 AC012443.1-201ENST00000605605 231 ntBASIC2.91□□□□□ -1.94
CLDN9O95484 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.91□□□□□ -1.94
CLDN9O95484 AC009570.1-201ENST00000609599 745 ntBASIC2.91□□□□□ -1.94
CLDN9O95484 AC093673.2-201ENST00000609674 331 ntBASIC2.91□□□□□ -1.94
CLDN9O95484 RNU6-1192P-201ENST00000612197 107 ntBASIC2.91□□□□□ -1.94
CLDN9O95484 RNU6-489P-201ENST00000618289 107 ntBASIC2.91□□□□□ -1.94
CLDN9O95484 AC007318.2-201ENST00000620999 243 ntBASIC2.91□□□□□ -1.94
CLDN9O95484 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC2.91□□□□□ -1.94
CLDN9O95484 AP003485.1-201ENST00000625093 753 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 187.2 ms