Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.73□□□□□ -2.13
ABCA1O95477 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC1.73□□□□□ -2.13
ABCA1O95477 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.73□□□□□ -2.13
ABCA1O95477 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC1.73□□□□□ -2.13
ABCA1O95477 AP000787.2-201ENST00000604432 568 ntBASIC1.73□□□□□ -2.13
ABCA1O95477 U2.15-201ENST00000611544 191 ntBASIC1.73□□□□□ -2.13
ABCA1O95477 U2.16-201ENST00000613119 191 ntBASIC1.73□□□□□ -2.13
ABCA1O95477 U2.12-201ENST00000613778 191 ntBASIC1.73□□□□□ -2.13
ABCA1O95477 U2.20-201ENST00000613956 192 ntBASIC1.73□□□□□ -2.13
ABCA1O95477 U2.9-201ENST00000615427 191 ntBASIC1.73□□□□□ -2.13
ABCA1O95477 U2.11-201ENST00000616345 191 ntBASIC1.73□□□□□ -2.13
ABCA1O95477 U2.2-201ENST00000616535 191 ntBASIC1.73□□□□□ -2.13
ABCA1O95477 U2.3-201ENST00000617785 191 ntBASIC1.73□□□□□ -2.13
ABCA1O95477 U2.19-201ENST00000618602 191 ntBASIC1.73□□□□□ -2.13
ABCA1O95477 RNU2-1-201ENST00000618664 191 ntBASIC1.73□□□□□ -2.13
ABCA1O95477 U2.6-201ENST00000619225 191 ntBASIC1.73□□□□□ -2.13
ABCA1O95477 U2.5-201ENST00000619465 191 ntBASIC1.73□□□□□ -2.13
ABCA1O95477 U2.10-201ENST00000620268 191 ntBASIC1.73□□□□□ -2.13
ABCA1O95477 MIR4496-201ENST00000635896 61 ntBASIC1.73□□□□□ -2.13
ABCA1O95477 AC008432.1-201ENST00000615912 1320 ntBASIC1.73□□□□□ -2.13
ABCA1O95477 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.72□□□□□ -2.13
ABCA1O95477 SNORA7.2-201ENST00000364446 145 ntBASIC1.72□□□□□ -2.13
ABCA1O95477 SNORD65-201ENST00000391079 73 ntBASIC1.72□□□□□ -2.13
ABCA1O95477 MTND4P11-201ENST00000417020 1058 ntBASIC1.72□□□□□ -2.13
ABCA1O95477 AC092427.1-202ENST00000430569 476 ntBASIC1.72□□□□□ -2.13
ABCA1O95477 RPL23AP16-201ENST00000441715 421 ntBASIC1.72□□□□□ -2.13
ABCA1O95477 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.72□□□□□ -2.13
ABCA1O95477 RPL38P4-201ENST00000502376 214 ntBASIC1.72□□□□□ -2.13
ABCA1O95477 AC117522.2-201ENST00000510049 657 ntBASIC1.72□□□□□ -2.13
ABCA1O95477 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC1.72□□□□□ -2.13
ABCA1O95477 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC1.72□□□□□ -2.13
ABCA1O95477 AL161912.3-201ENST00000605404 628 ntBASIC1.72□□□□□ -2.13
ABCA1O95477 AC093673.2-201ENST00000609674 331 ntBASIC1.72□□□□□ -2.13
ABCA1O95477 AL359198.2-201ENST00000611836 194 ntBASIC1.72□□□□□ -2.13
ABCA1O95477 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
ABCA1O95477 VN1R7P-201ENST00000619242 903 ntBASIC1.72□□□□□ -2.13
ABCA1O95477 VPS8-228ENST00000628962 207 ntTSL 5 BASIC1.72□□□□□ -2.13
ABCA1O95477 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
ABCA1O95477 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
ABCA1O95477 RPL31P2-201ENST00000413849 377 ntBASIC1.71□□□□□ -2.13
ABCA1O95477 XKRYP4-201ENST00000414395 483 ntBASIC1.71□□□□□ -2.13
ABCA1O95477 FNDC3CP-201ENST00000420795 1155 ntBASIC1.71□□□□□ -2.13
ABCA1O95477 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC1.71□□□□□ -2.13
ABCA1O95477 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC1.71□□□□□ -2.13
ABCA1O95477 XKRYP5-201ENST00000449659 483 ntBASIC1.71□□□□□ -2.13
ABCA1O95477 PTGES3P5-201ENST00000455109 434 ntBASIC1.71□□□□□ -2.13
ABCA1O95477 TRBV26-201ENST00000456572 344 ntBASIC1.71□□□□□ -2.13
ABCA1O95477 AC005912.1-201ENST00000495392 255 ntBASIC1.71□□□□□ -2.13
ABCA1O95477 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC1.71□□□□□ -2.13
ABCA1O95477 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC1.71□□□□□ -2.13
ABCA1O95477 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC1.71□□□□□ -2.13
ABCA1O95477 AC087241.2-201ENST00000535801 324 ntBASIC1.71□□□□□ -2.13
ABCA1O95477 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC1.71□□□□□ -2.13
ABCA1O95477 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.13
ABCA1O95477 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.71□□□□□ -2.13
ABCA1O95477 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC1.71□□□□□ -2.13
ABCA1O95477 YWHAEP7-203ENST00000622054 312 ntBASIC1.71□□□□□ -2.13
ABCA1O95477 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC1.71□□□□□ -2.14
ABCA1O95477 ADAM3A-203ENST00000461344 2157 ntBASIC1.71□□□□□ -2.14
ABCA1O95477 AL359715.4-201ENST00000606629 1436 ntBASIC1.71□□□□□ -2.14
ABCA1O95477 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
ABCA1O95477 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
ABCA1O95477 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC1.71□□□□□ -2.14
ABCA1O95477 RNU4-62P-201ENST00000410125 130 ntBASIC1.71□□□□□ -2.14
ABCA1O95477 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC1.71□□□□□ -2.14
ABCA1O95477 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC1.71□□□□□ -2.14
ABCA1O95477 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC1.71□□□□□ -2.14
ABCA1O95477 AC129850.1-201ENST00000436203 508 ntBASIC1.71□□□□□ -2.14
ABCA1O95477 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.71□□□□□ -2.14
ABCA1O95477 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC1.71□□□□□ -2.14
ABCA1O95477 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC1.71□□□□□ -2.14
ABCA1O95477 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC1.71□□□□□ -2.14
ABCA1O95477 AC055855.1-201ENST00000489563 579 ntBASIC1.71□□□□□ -2.14
ABCA1O95477 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC1.71□□□□□ -2.14
ABCA1O95477 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC1.71□□□□□ -2.14
ABCA1O95477 AC091488.1-201ENST00000604239 660 ntBASIC1.71□□□□□ -2.14
ABCA1O95477 AC016877.3-201ENST00000606778 504 ntBASIC1.71□□□□□ -2.14
ABCA1O95477 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC1.71□□□□□ -2.14
ABCA1O95477 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC1.71□□□□□ -2.14
ABCA1O95477 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC1.71□□□□□ -2.14
ABCA1O95477 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
ABCA1O95477 AC244517.1-201ENST00000606030 2086 ntBASIC1.7□□□□□ -2.14
ABCA1O95477 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC1.7□□□□□ -2.14
ABCA1O95477 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
ABCA1O95477 RNU1-101P-201ENST00000391171 127 ntBASIC1.7□□□□□ -2.14
ABCA1O95477 AP000567.1-201ENST00000406413 156 ntBASIC1.7□□□□□ -2.14
ABCA1O95477 U3.37-201ENST00000408528 213 ntBASIC1.7□□□□□ -2.14
ABCA1O95477 MTCO1P43-201ENST00000431831 488 ntBASIC1.7□□□□□ -2.14
ABCA1O95477 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.7□□□□□ -2.14
ABCA1O95477 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
ABCA1O95477 SNRPGP9-201ENST00000456025 225 ntBASIC1.7□□□□□ -2.14
ABCA1O95477 AC114982.2-201ENST00000461396 358 ntBASIC1.7□□□□□ -2.14
ABCA1O95477 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
ABCA1O95477 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.7□□□□□ -2.14
ABCA1O95477 AP003467.2-201ENST00000520175 319 ntBASIC1.7□□□□□ -2.14
ABCA1O95477 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC1.7□□□□□ -2.14
ABCA1O95477 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.7□□□□□ -2.14
ABCA1O95477 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
ABCA1O95477 AMZ2P1-203ENST00000565833 850 ntBASIC1.7□□□□□ -2.14
ABCA1O95477 AL110115.1-201ENST00000614396 364 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms