Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 BNIP3P2-201ENST00000441221 577 ntBASIC0.88□□□□□ -2.27
USH2AO75445 PIGFP3-201ENST00000441918 722 ntBASIC0.88□□□□□ -2.27
USH2AO75445 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC0.88□□□□□ -2.27
USH2AO75445 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC0.88□□□□□ -2.27
USH2AO75445 RFC5P1-201ENST00000454419 874 ntBASIC0.88□□□□□ -2.27
USH2AO75445 AC092989.1-201ENST00000481235 277 ntBASIC0.88□□□□□ -2.27
USH2AO75445 HMGB1P41-201ENST00000520234 440 ntBASIC0.88□□□□□ -2.27
USH2AO75445 PNPT1P2-201ENST00000456768 2050 ntBASIC0.88□□□□□ -2.27
USH2AO75445 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC0.88□□□□□ -2.27
USH2AO75445 SNORD114-27-201ENST00000363766 70 ntBASIC0.88□□□□□ -2.27
USH2AO75445 RNU6-1027P-201ENST00000383998 107 ntBASIC0.88□□□□□ -2.27
USH2AO75445 RNU2-6P-201ENST00000411404 190 ntBASIC0.88□□□□□ -2.27
USH2AO75445 AC005534.2-201ENST00000431047 433 ntBASIC0.88□□□□□ -2.27
USH2AO75445 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC0.88□□□□□ -2.27
USH2AO75445 RN7SKP60-201ENST00000516985 239 ntBASIC0.88□□□□□ -2.27
USH2AO75445 MIR4421-201ENST00000578133 69 ntBASIC0.88□□□□□ -2.27
USH2AO75445 AC068790.3-201ENST00000602988 553 ntBASIC0.88□□□□□ -2.27
USH2AO75445 AL645939.4-201ENST00000604495 135 ntBASIC0.88□□□□□ -2.27
USH2AO75445 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC0.88□□□□□ -2.27
USH2AO75445 AC093775.1-201ENST00000624154 1868 ntBASIC0.88□□□□□ -2.27
USH2AO75445 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
USH2AO75445 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
USH2AO75445 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
USH2AO75445 RNU6-492P-201ENST00000363035 104 ntBASIC0.88□□□□□ -2.27
USH2AO75445 GSTA12P-201ENST00000402398 508 ntBASIC0.88□□□□□ -2.27
USH2AO75445 LAP3P1-201ENST00000403648 294 ntBASIC0.88□□□□□ -2.27
USH2AO75445 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC0.88□□□□□ -2.27
USH2AO75445 AL583843.1-201ENST00000456070 346 ntBASIC0.88□□□□□ -2.27
USH2AO75445 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC0.88□□□□□ -2.27
USH2AO75445 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC0.88□□□□□ -2.27
USH2AO75445 Z99129.2-201ENST00000619967 314 ntBASIC0.88□□□□□ -2.27
USH2AO75445 ANKRD18EP-201ENST00000405487 2632 ntBASIC0.88□□□□□ -2.27
USH2AO75445 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC0.88□□□□□ -2.27
USH2AO75445 MTND1P18-201ENST00000448191 573 ntBASIC0.88□□□□□ -2.27
USH2AO75445 MIR98-201ENST00000606724 119 ntBASIC0.88□□□□□ -2.27
USH2AO75445 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC0.88□□□□□ -2.27
USH2AO75445 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
USH2AO75445 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
USH2AO75445 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
USH2AO75445 AC125238.1-201ENST00000448842 249 ntBASIC0.87□□□□□ -2.27
USH2AO75445 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC0.87□□□□□ -2.27
USH2AO75445 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC0.87□□□□□ -2.27
USH2AO75445 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC0.87□□□□□ -2.27
USH2AO75445 AC103987.3-201ENST00000582071 292 ntBASIC0.87□□□□□ -2.27
USH2AO75445 MIR5092-201ENST00000583139 88 ntBASIC0.87□□□□□ -2.27
USH2AO75445 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC0.87□□□□□ -2.27
USH2AO75445 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
USH2AO75445 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC0.87□□□□□ -2.27
USH2AO75445 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC0.87□□□□□ -2.27
USH2AO75445 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC0.87□□□□□ -2.27
USH2AO75445 RNU6-805P-201ENST00000365643 106 ntBASIC0.87□□□□□ -2.27
USH2AO75445 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC0.87□□□□□ -2.27
USH2AO75445 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC0.87□□□□□ -2.27
USH2AO75445 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC0.87□□□□□ -2.27
USH2AO75445 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC0.87□□□□□ -2.27
USH2AO75445 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC0.87□□□□□ -2.27
USH2AO75445 AC245036.5-201ENST00000596330 847 ntBASIC0.87□□□□□ -2.27
USH2AO75445 AC073387.2-201ENST00000604797 784 ntBASIC0.87□□□□□ -2.27
USH2AO75445 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC0.87□□□□□ -2.27
USH2AO75445 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
USH2AO75445 RNU6-666P-201ENST00000363499 107 ntBASIC0.87□□□□□ -2.27
USH2AO75445 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC0.87□□□□□ -2.27
USH2AO75445 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
USH2AO75445 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC0.87□□□□□ -2.27
USH2AO75445 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC0.87□□□□□ -2.27
USH2AO75445 AP000889.2-201ENST00000532684 490 ntBASIC0.87□□□□□ -2.27
USH2AO75445 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC0.87□□□□□ -2.27
USH2AO75445 AL049840.6-202ENST00000603373 279 ntBASIC0.87□□□□□ -2.27
USH2AO75445 AL645944.1-201ENST00000603857 493 ntBASIC0.87□□□□□ -2.27
USH2AO75445 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
USH2AO75445 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC0.87□□□□□ -2.27
USH2AO75445 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC0.87□□□□□ -2.27
USH2AO75445 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
USH2AO75445 HMGB3P8-201ENST00000449709 577 ntBASIC0.87□□□□□ -2.27
USH2AO75445 AL645939.1-201ENST00000453429 797 ntBASIC0.87□□□□□ -2.27
USH2AO75445 AP000852.1-201ENST00000472460 573 ntBASIC0.87□□□□□ -2.27
USH2AO75445 ARL4AP2-201ENST00000507378 601 ntBASIC0.87□□□□□ -2.27
USH2AO75445 AL451049.1-201ENST00000608672 497 ntBASIC0.87□□□□□ -2.27
USH2AO75445 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
USH2AO75445 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
USH2AO75445 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
USH2AO75445 Y_RNA.60-201ENST00000362831 98 ntBASIC0.86□□□□□ -2.27
USH2AO75445 RNA5SP457-201ENST00000363657 124 ntBASIC0.86□□□□□ -2.27
USH2AO75445 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC0.86□□□□□ -2.27
USH2AO75445 AC017099.1-201ENST00000448261 1028 ntBASIC0.86□□□□□ -2.27
USH2AO75445 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC0.86□□□□□ -2.27
USH2AO75445 AC068305.1-201ENST00000497406 726 ntBASIC0.86□□□□□ -2.27
USH2AO75445 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC0.86□□□□□ -2.27
USH2AO75445 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC0.86□□□□□ -2.27
USH2AO75445 IGHV3-76-201ENST00000522465 295 ntBASIC0.86□□□□□ -2.27
USH2AO75445 SNORA67.5-201ENST00000391036 107 ntBASIC0.86□□□□□ -2.27
USH2AO75445 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC0.86□□□□□ -2.27
USH2AO75445 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC0.86□□□□□ -2.27
USH2AO75445 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC0.86□□□□□ -2.27
USH2AO75445 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.86□□□□□ -2.27
USH2AO75445 AC122134.1-201ENST00000565664 1104 ntBASIC0.86□□□□□ -2.27
USH2AO75445 AC092650.2-201ENST00000619984 902 ntBASIC0.86□□□□□ -2.27
USH2AO75445 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
USH2AO75445 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC0.86□□□□□ -2.27
USH2AO75445 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 144.8 ms