Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC2.58□□□□□ -2
SCN2BO60939 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC2.58□□□□□ -2
SCN2BO60939 AC124293.1-201ENST00000530034 493 ntBASIC2.58□□□□□ -2
SCN2BO60939 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.58□□□□□ -2
SCN2BO60939 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.58□□□□□ -2
SCN2BO60939 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC2.58□□□□□ -2
SCN2BO60939 HMGB1P14-201ENST00000557424 591 ntBASIC2.58□□□□□ -2
SCN2BO60939 CYCSP39-201ENST00000565821 309 ntBASIC2.58□□□□□ -2
SCN2BO60939 AL161734.1-201ENST00000609720 557 ntBASIC2.58□□□□□ -2
SCN2BO60939 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SCN2BO60939 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.58□□□□□ -2
SCN2BO60939 TPTE2P4-201ENST00000258589 1605 ntBASIC2.57□□□□□ -2
SCN2BO60939 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.57□□□□□ -2
SCN2BO60939 VTRNA1-1-201ENST00000363120 99 ntBASIC2.57□□□□□ -2
SCN2BO60939 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.57□□□□□ -2
SCN2BO60939 ARF4P3-201ENST00000397387 509 ntBASIC2.57□□□□□ -2
SCN2BO60939 AC092447.6-201ENST00000414578 210 ntBASIC2.57□□□□□ -2
SCN2BO60939 AL513175.2-201ENST00000422071 443 ntBASIC2.57□□□□□ -2
SCN2BO60939 AL009174.1-201ENST00000426577 416 ntBASIC2.57□□□□□ -2
SCN2BO60939 RPL7L1P10-201ENST00000427790 463 ntBASIC2.57□□□□□ -2
SCN2BO60939 AC012497.1-201ENST00000429392 575 ntBASIC2.57□□□□□ -2
SCN2BO60939 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.57□□□□□ -2
SCN2BO60939 RNF2P1-201ENST00000442955 1010 ntBASIC2.57□□□□□ -2
SCN2BO60939 ST13P20-201ENST00000447996 1065 ntBASIC2.57□□□□□ -2
SCN2BO60939 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.57□□□□□ -2
SCN2BO60939 AC093767.1-201ENST00000504523 156 ntBASIC2.57□□□□□ -2
SCN2BO60939 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC2.57□□□□□ -2
SCN2BO60939 AC103833.1-201ENST00000517442 172 ntBASIC2.57□□□□□ -2
SCN2BO60939 IGJP1-201ENST00000522682 475 ntBASIC2.57□□□□□ -2
SCN2BO60939 BPTFP1-201ENST00000579209 492 ntBASIC2.57□□□□□ -2
SCN2BO60939 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC2.57□□□□□ -2
SCN2BO60939 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC2.57□□□□□ -2
SCN2BO60939 AL035413.2-201ENST00000604801 525 ntBASIC2.57□□□□□ -2
SCN2BO60939 AC024560.3-201ENST00000608482 349 ntBASIC2.57□□□□□ -2
SCN2BO60939 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.57□□□□□ -2
SCN2BO60939 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC2.57□□□□□ -2
SCN2BO60939 AC027309.3-201ENST00000623419 351 ntBASIC2.57□□□□□ -2
SCN2BO60939 AP006248.3-201ENST00000623580 594 ntBASIC2.57□□□□□ -2
SCN2BO60939 AC010680.1-201ENST00000590024 3590 ntBASIC2.57□□□□□ -2
SCN2BO60939 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.57□□□□□ -2
SCN2BO60939 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
SCN2BO60939 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
SCN2BO60939 MTND4P13-201ENST00000402078 1023 ntBASIC2.56□□□□□ -2
SCN2BO60939 AL356057.2-201ENST00000403318 432 ntBASIC2.56□□□□□ -2
SCN2BO60939 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.56□□□□□ -2
SCN2BO60939 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.56□□□□□ -2
SCN2BO60939 AC007000.2-201ENST00000442564 487 ntBASIC2.56□□□□□ -2
SCN2BO60939 NANOGNBP1-201ENST00000448444 480 ntBASIC2.56□□□□□ -2
SCN2BO60939 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.56□□□□□ -2
SCN2BO60939 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC2.56□□□□□ -2
SCN2BO60939 snoU13.22-201ENST00000459428 104 ntBASIC2.56□□□□□ -2
SCN2BO60939 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.56□□□□□ -2
SCN2BO60939 SNORA31.21-201ENST00000517180 77 ntBASIC2.56□□□□□ -2
SCN2BO60939 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC2.56□□□□□ -2
SCN2BO60939 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.56□□□□□ -2
SCN2BO60939 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.56□□□□□ -2
SCN2BO60939 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.56□□□□□ -2
SCN2BO60939 AC007954.1-201ENST00000554198 494 ntBASIC2.56□□□□□ -2
SCN2BO60939 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.56□□□□□ -2
SCN2BO60939 GTF2IP8-201ENST00000560687 584 ntBASIC2.56□□□□□ -2
SCN2BO60939 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC2.56□□□□□ -2
SCN2BO60939 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.56□□□□□ -2
SCN2BO60939 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC2.56□□□□□ -2
SCN2BO60939 CYP3A51P-201ENST00000633513 256 ntBASIC2.56□□□□□ -2
SCN2BO60939 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.56□□□□□ -2
SCN2BO60939 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.56□□□□□ -2
SCN2BO60939 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.56□□□□□ -2
SCN2BO60939 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.56□□□□□ -2
SCN2BO60939 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SCN2BO60939 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.55□□□□□ -2
SCN2BO60939 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.55□□□□□ -2
SCN2BO60939 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.55□□□□□ -2
SCN2BO60939 RNU1-105P-201ENST00000363470 161 ntBASIC2.55□□□□□ -2
SCN2BO60939 RNU1-112P-201ENST00000364401 164 ntBASIC2.55□□□□□ -2
SCN2BO60939 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SCN2BO60939 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SCN2BO60939 TMSB4XP8-201ENST00000402089 135 ntBASIC2.55□□□□□ -2
SCN2BO60939 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
SCN2BO60939 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.55□□□□□ -2
SCN2BO60939 TMSB4XP6-201ENST00000415187 135 ntBASIC2.55□□□□□ -2
SCN2BO60939 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.55□□□□□ -2
SCN2BO60939 TMSB4XP1-201ENST00000424567 135 ntBASIC2.55□□□□□ -2
SCN2BO60939 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.55□□□□□ -2
SCN2BO60939 AC092427.1-202ENST00000430569 476 ntBASIC2.55□□□□□ -2
SCN2BO60939 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC2.55□□□□□ -2
SCN2BO60939 RPL23AP74-201ENST00000437246 471 ntBASIC2.55□□□□□ -2
SCN2BO60939 AL121871.1-201ENST00000443413 436 ntBASIC2.55□□□□□ -2
SCN2BO60939 RSL24D1P3-201ENST00000449255 495 ntBASIC2.55□□□□□ -2
SCN2BO60939 MTND5P8-201ENST00000449817 1083 ntBASIC2.55□□□□□ -2
SCN2BO60939 AP000705.1-201ENST00000454567 350 ntBASIC2.55□□□□□ -2
SCN2BO60939 MTND2P6-201ENST00000455337 1030 ntBASIC2.55□□□□□ -2
SCN2BO60939 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.55□□□□□ -2
SCN2BO60939 MTCO3P2-201ENST00000457365 171 ntBASIC2.55□□□□□ -2
SCN2BO60939 S100A11P2-201ENST00000467589 312 ntBASIC2.55□□□□□ -2
SCN2BO60939 RPS15AP34-201ENST00000487776 387 ntBASIC2.55□□□□□ -2
SCN2BO60939 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC2.55□□□□□ -2
SCN2BO60939 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC2.55□□□□□ -2
SCN2BO60939 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC2.55□□□□□ -2
SCN2BO60939 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.55□□□□□ -2
SCN2BO60939 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms