Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 AP003072.4-201ENST00000624580 310 ntBASIC3.6□□□□□ -1.83
CACNA1FO60840 AC119674.1-212ENST00000641155 993 ntBASIC3.6□□□□□ -1.83
CACNA1FO60840 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.59□□□□□ -1.83
CACNA1FO60840 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
CACNA1FO60840 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CACNA1FO60840 AC087359.1-201ENST00000508335 1740 ntBASIC3.59□□□□□ -1.83
CACNA1FO60840 AC092104.1-201ENST00000497346 1441 ntBASIC3.59□□□□□ -1.83
CACNA1FO60840 DCAF13P3-201ENST00000561147 1334 ntBASIC3.59□□□□□ -1.83
CACNA1FO60840 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
CACNA1FO60840 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
CACNA1FO60840 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.59□□□□□ -1.83
CACNA1FO60840 RN7SKP222-201ENST00000410651 315 ntBASIC3.59□□□□□ -1.83
CACNA1FO60840 RNU2-42P-201ENST00000410697 113 ntBASIC3.59□□□□□ -1.83
CACNA1FO60840 LINC01347-201ENST00000417964 355 ntBASIC3.59□□□□□ -1.83
CACNA1FO60840 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC3.59□□□□□ -1.83
CACNA1FO60840 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.59□□□□□ -1.83
CACNA1FO60840 VDAC1P3-201ENST00000434069 851 ntBASIC3.59□□□□□ -1.83
CACNA1FO60840 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC3.59□□□□□ -1.83
CACNA1FO60840 MTND5P2-201ENST00000442927 1142 ntBASIC3.59□□□□□ -1.83
CACNA1FO60840 RPL7P31-201ENST00000450192 724 ntBASIC3.59□□□□□ -1.83
CACNA1FO60840 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC3.59□□□□□ -1.83
CACNA1FO60840 AC092754.2-201ENST00000463506 460 ntBASIC3.59□□□□□ -1.83
CACNA1FO60840 AC010683.1-201ENST00000473673 378 ntBASIC3.59□□□□□ -1.83
CACNA1FO60840 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
CACNA1FO60840 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3.59□□□□□ -1.83
CACNA1FO60840 AC022080.3-201ENST00000544433 482 ntBASIC3.59□□□□□ -1.83
CACNA1FO60840 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC3.59□□□□□ -1.83
CACNA1FO60840 AC055876.1-202ENST00000567053 138 ntBASIC3.59□□□□□ -1.83
CACNA1FO60840 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC3.59□□□□□ -1.83
CACNA1FO60840 AL355816.1-201ENST00000607951 118 ntBASIC3.59□□□□□ -1.83
CACNA1FO60840 AC087821.2-201ENST00000637086 450 ntBASIC3.59□□□□□ -1.83
CACNA1FO60840 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
CACNA1FO60840 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
CACNA1FO60840 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.59□□□□□ -1.84
CACNA1FO60840 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CACNA1FO60840 MIR26A1-201ENST00000362205 77 ntBASIC3.58□□□□□ -1.84
CACNA1FO60840 Y_RNA.111-201ENST00000363248 100 ntBASIC3.58□□□□□ -1.84
CACNA1FO60840 RN7SKP44-201ENST00000363602 316 ntBASIC3.58□□□□□ -1.84
CACNA1FO60840 Y_RNA.500-201ENST00000384466 111 ntBASIC3.58□□□□□ -1.84
CACNA1FO60840 RSL24D1P4-201ENST00000400938 484 ntBASIC3.58□□□□□ -1.84
CACNA1FO60840 AC092745.2-202ENST00000411880 369 ntBASIC3.58□□□□□ -1.84
CACNA1FO60840 RPS3AP44-201ENST00000425466 790 ntBASIC3.58□□□□□ -1.84
CACNA1FO60840 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.58□□□□□ -1.84
CACNA1FO60840 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC3.58□□□□□ -1.84
CACNA1FO60840 MTCO2P16-201ENST00000436962 677 ntBASIC3.58□□□□□ -1.84
CACNA1FO60840 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC3.58□□□□□ -1.84
CACNA1FO60840 AC097499.1-201ENST00000444277 208 ntBASIC3.58□□□□□ -1.84
CACNA1FO60840 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC3.58□□□□□ -1.84
CACNA1FO60840 NPM1P13-201ENST00000452663 865 ntBASIC3.58□□□□□ -1.84
CACNA1FO60840 RPL21P134-201ENST00000453468 483 ntBASIC3.58□□□□□ -1.84
CACNA1FO60840 VN1R104P-201ENST00000505115 1009 ntBASIC3.58□□□□□ -1.84
CACNA1FO60840 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CACNA1FO60840 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.58□□□□□ -1.84
CACNA1FO60840 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC3.58□□□□□ -1.84
CACNA1FO60840 AC022880.1-201ENST00000534017 973 ntBASIC3.58□□□□□ -1.84
CACNA1FO60840 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.58□□□□□ -1.84
CACNA1FO60840 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.58□□□□□ -1.84
CACNA1FO60840 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC3.58□□□□□ -1.84
CACNA1FO60840 AC025260.1-201ENST00000548858 430 ntBASIC3.58□□□□□ -1.84
CACNA1FO60840 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC3.58□□□□□ -1.84
CACNA1FO60840 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.58□□□□□ -1.84
CACNA1FO60840 AC006504.3-201ENST00000586818 523 ntBASIC3.58□□□□□ -1.84
CACNA1FO60840 AC103591.3-201ENST00000608684 209 ntBASIC3.58□□□□□ -1.84
CACNA1FO60840 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CACNA1FO60840 AC121761.2-201ENST00000617300 689 ntBASIC3.58□□□□□ -1.84
CACNA1FO60840 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.58□□□□□ -1.84
CACNA1FO60840 AP000676.3-201ENST00000623299 569 ntBASIC3.58□□□□□ -1.84
CACNA1FO60840 AC091965.5-201ENST00000624785 342 ntBASIC3.58□□□□□ -1.84
CACNA1FO60840 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CACNA1FO60840 AC093536.2-201ENST00000565257 1406 ntBASIC3.58□□□□□ -1.84
CACNA1FO60840 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
CACNA1FO60840 OR11H5P-202ENST00000641612 1325 ntBASIC3.58□□□□□ -1.84
CACNA1FO60840 AL391994.1-201ENST00000254724 282 ntBASIC3.58□□□□□ -1.84
CACNA1FO60840 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.58□□□□□ -1.84
CACNA1FO60840 RNU6-77P-201ENST00000410554 91 ntBASIC3.58□□□□□ -1.84
CACNA1FO60840 AC013404.1-201ENST00000413068 249 ntBASIC3.58□□□□□ -1.84
CACNA1FO60840 AL645937.1-202ENST00000421799 937 ntBASIC3.58□□□□□ -1.84
CACNA1FO60840 C1DP1-201ENST00000426049 402 ntBASIC3.58□□□□□ -1.84
CACNA1FO60840 AL662791.1-201ENST00000441992 928 ntBASIC3.58□□□□□ -1.84
CACNA1FO60840 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.58□□□□□ -1.84
CACNA1FO60840 AC118469.1-201ENST00000442943 488 ntBASIC3.58□□□□□ -1.84
CACNA1FO60840 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC3.58□□□□□ -1.84
CACNA1FO60840 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC3.58□□□□□ -1.84
CACNA1FO60840 S100A11P1-201ENST00000477525 312 ntBASIC3.58□□□□□ -1.84
CACNA1FO60840 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3.58□□□□□ -1.84
CACNA1FO60840 DYNLL1P6-201ENST00000503440 264 ntBASIC3.58□□□□□ -1.84
CACNA1FO60840 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.58□□□□□ -1.84
CACNA1FO60840 LAMTOR3P2-201ENST00000504479 232 ntBASIC3.58□□□□□ -1.84
CACNA1FO60840 AC079395.1-201ENST00000510981 262 ntBASIC3.58□□□□□ -1.84
CACNA1FO60840 RNU6-232P-201ENST00000517144 64 ntBASIC3.58□□□□□ -1.84
CACNA1FO60840 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.58□□□□□ -1.84
CACNA1FO60840 COX6CP8-201ENST00000522620 226 ntBASIC3.58□□□□□ -1.84
CACNA1FO60840 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC3.58□□□□□ -1.84
CACNA1FO60840 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CACNA1FO60840 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.58□□□□□ -1.84
CACNA1FO60840 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC3.58□□□□□ -1.84
CACNA1FO60840 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.58□□□□□ -1.84
CACNA1FO60840 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.58□□□□□ -1.84
CACNA1FO60840 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.58□□□□□ -1.84
CACNA1FO60840 VN1R90P-201ENST00000595717 726 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 137.3 ms