Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 CKS1BP3-201ENST00000600888 237 ntBASIC3.13□□□□□ -1.91
LCMT2O60294 AC010738.1-201ENST00000604970 987 ntBASIC3.13□□□□□ -1.91
LCMT2O60294 AC080013.3-201ENST00000606839 578 ntBASIC3.13□□□□□ -1.91
LCMT2O60294 AC107294.3-201ENST00000609211 526 ntBASIC3.13□□□□□ -1.91
LCMT2O60294 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.13□□□□□ -1.91
LCMT2O60294 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.13□□□□□ -1.91
LCMT2O60294 AC068787.1-201ENST00000623908 691 ntBASIC3.13□□□□□ -1.91
LCMT2O60294 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.13□□□□□ -1.91
LCMT2O60294 AC116618.1-201ENST00000634617 774 ntBASIC3.13□□□□□ -1.91
LCMT2O60294 U6.101-201ENST00000637707 76 ntBASIC3.13□□□□□ -1.91
LCMT2O60294 MTCO1P23-201ENST00000415223 1526 ntBASIC3.13□□□□□ -1.91
LCMT2O60294 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
LCMT2O60294 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.12□□□□□ -1.91
LCMT2O60294 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.12□□□□□ -1.91
LCMT2O60294 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
LCMT2O60294 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
LCMT2O60294 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
LCMT2O60294 RNU1-75P-201ENST00000347264 129 ntBASIC3.12□□□□□ -1.91
LCMT2O60294 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
LCMT2O60294 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.12□□□□□ -1.91
LCMT2O60294 CYCSP45-201ENST00000402289 315 ntBASIC3.12□□□□□ -1.91
LCMT2O60294 AL354719.1-201ENST00000406535 843 ntBASIC3.12□□□□□ -1.91
LCMT2O60294 RNA5SP293-201ENST00000410527 113 ntBASIC3.12□□□□□ -1.91
LCMT2O60294 RNU2-15P-201ENST00000410692 191 ntBASIC3.12□□□□□ -1.91
LCMT2O60294 RNA5SP120-201ENST00000410900 112 ntBASIC3.12□□□□□ -1.91
LCMT2O60294 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
LCMT2O60294 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
LCMT2O60294 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC3.12□□□□□ -1.91
LCMT2O60294 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.12□□□□□ -1.91
LCMT2O60294 AC092427.1-201ENST00000439177 601 ntBASIC3.12□□□□□ -1.91
LCMT2O60294 MTCO2P25-201ENST00000447065 681 ntBASIC3.12□□□□□ -1.91
LCMT2O60294 RPL39P6-201ENST00000448289 150 ntBASIC3.12□□□□□ -1.91
LCMT2O60294 RPL21P134-201ENST00000453468 483 ntBASIC3.12□□□□□ -1.91
LCMT2O60294 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
LCMT2O60294 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.12□□□□□ -1.91
LCMT2O60294 FABP5P12-201ENST00000515543 389 ntBASIC3.12□□□□□ -1.91
LCMT2O60294 RNU6-711P-201ENST00000517255 106 ntBASIC3.12□□□□□ -1.91
LCMT2O60294 SLC2A13P1-201ENST00000531560 322 ntBASIC3.12□□□□□ -1.91
LCMT2O60294 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.12□□□□□ -1.91
LCMT2O60294 HIGD1AP1-201ENST00000550979 275 ntBASIC3.12□□□□□ -1.91
LCMT2O60294 MTND1P24-201ENST00000552175 861 ntBASIC3.12□□□□□ -1.91
LCMT2O60294 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.12□□□□□ -1.91
LCMT2O60294 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.12□□□□□ -1.91
LCMT2O60294 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.12□□□□□ -1.91
LCMT2O60294 MTND4P33-201ENST00000556706 766 ntBASIC3.12□□□□□ -1.91
LCMT2O60294 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.12□□□□□ -1.91
LCMT2O60294 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC3.12□□□□□ -1.91
LCMT2O60294 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC3.12□□□□□ -1.91
LCMT2O60294 AC090695.1-201ENST00000561269 1222 ntBASIC3.12□□□□□ -1.91
LCMT2O60294 MTCO3P24-201ENST00000572729 782 ntBASIC3.12□□□□□ -1.91
LCMT2O60294 AC084757.4-201ENST00000616350 526 ntBASIC3.12□□□□□ -1.91
LCMT2O60294 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
LCMT2O60294 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
LCMT2O60294 PCF11-AS1-201ENST00000602322 1516 ntBASIC3.12□□□□□ -1.91
LCMT2O60294 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
LCMT2O60294 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
LCMT2O60294 AC118273.1-201ENST00000525324 3006 ntBASIC3.11□□□□□ -1.91
LCMT2O60294 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
LCMT2O60294 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
LCMT2O60294 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
LCMT2O60294 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
LCMT2O60294 RNA5SP72-201ENST00000364442 117 ntBASIC3.11□□□□□ -1.91
LCMT2O60294 MIR34B-201ENST00000385076 84 ntBASIC3.11□□□□□ -1.91
LCMT2O60294 AL357075.1-201ENST00000404107 726 ntBASIC3.11□□□□□ -1.91
LCMT2O60294 RNA5SP229-201ENST00000410809 99 ntBASIC3.11□□□□□ -1.91
LCMT2O60294 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.11□□□□□ -1.91
LCMT2O60294 MRPL50P2-201ENST00000416821 482 ntBASIC3.11□□□□□ -1.91
LCMT2O60294 GLRXP1-201ENST00000423261 334 ntBASIC3.11□□□□□ -1.91
LCMT2O60294 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.11□□□□□ -1.91
LCMT2O60294 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC3.11□□□□□ -1.91
LCMT2O60294 SNRPEP4-201ENST00000435815 279 ntBASIC3.11□□□□□ -1.91
LCMT2O60294 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
LCMT2O60294 CST9LP2-201ENST00000437612 320 ntBASIC3.11□□□□□ -1.91
LCMT2O60294 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.11□□□□□ -1.91
LCMT2O60294 MTCYBP34-201ENST00000439552 670 ntBASIC3.11□□□□□ -1.91
LCMT2O60294 MTND2P20-201ENST00000440805 661 ntBASIC3.11□□□□□ -1.91
LCMT2O60294 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.11□□□□□ -1.91
LCMT2O60294 MTCYBP11-201ENST00000447254 1109 ntBASIC3.11□□□□□ -1.91
LCMT2O60294 RPL18AP17-201ENST00000455326 198 ntBASIC3.11□□□□□ -1.91
LCMT2O60294 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC3.11□□□□□ -1.91
LCMT2O60294 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
LCMT2O60294 MTND4LP22-201ENST00000508209 276 ntBASIC3.11□□□□□ -1.91
LCMT2O60294 AC079395.1-201ENST00000510981 262 ntBASIC3.11□□□□□ -1.91
LCMT2O60294 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.11□□□□□ -1.91
LCMT2O60294 AC026412.2-201ENST00000512270 1075 ntBASIC3.11□□□□□ -1.91
LCMT2O60294 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC3.11□□□□□ -1.91
LCMT2O60294 RNU6-1095P-201ENST00000516148 108 ntBASIC3.11□□□□□ -1.91
LCMT2O60294 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.11□□□□□ -1.91
LCMT2O60294 ERHP1-201ENST00000523006 310 ntBASIC3.11□□□□□ -1.91
LCMT2O60294 MTCO2P15-201ENST00000532655 656 ntBASIC3.11□□□□□ -1.91
LCMT2O60294 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
LCMT2O60294 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
LCMT2O60294 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.11□□□□□ -1.91
LCMT2O60294 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.11□□□□□ -1.91
LCMT2O60294 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.11□□□□□ -1.91
LCMT2O60294 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC3.11□□□□□ -1.91
LCMT2O60294 AC022662.1-201ENST00000580252 331 ntBASIC3.11□□□□□ -1.91
LCMT2O60294 AC106900.2-201ENST00000604994 317 ntBASIC3.11□□□□□ -1.91
LCMT2O60294 AC107952.2-201ENST00000606048 486 ntBASIC3.11□□□□□ -1.91
LCMT2O60294 AC034229.4-201ENST00000607861 441 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms