Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 USP9YP8-201ENST00000441913 500 ntBASIC1.68□□□□□ -2.14
SSSCA1O60232 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC1.68□□□□□ -2.14
SSSCA1O60232 AC044797.1-201ENST00000445744 679 ntBASIC1.68□□□□□ -2.14
SSSCA1O60232 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC1.68□□□□□ -2.14
SSSCA1O60232 AC078857.1-201ENST00000469870 667 ntBASIC1.68□□□□□ -2.14
SSSCA1O60232 SETP11-201ENST00000473027 690 ntBASIC1.68□□□□□ -2.14
SSSCA1O60232 AL135752.1-201ENST00000479477 471 ntBASIC1.68□□□□□ -2.14
SSSCA1O60232 RPS27P21-201ENST00000486977 252 ntBASIC1.68□□□□□ -2.14
SSSCA1O60232 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC1.68□□□□□ -2.14
SSSCA1O60232 OR5BM1P-201ENST00000512021 366 ntBASIC1.68□□□□□ -2.14
SSSCA1O60232 AC016065.2-201ENST00000514530 444 ntBASIC1.68□□□□□ -2.14
SSSCA1O60232 SCARNA16.3-201ENST00000516595 184 ntBASIC1.68□□□□□ -2.14
SSSCA1O60232 RNU6-1308P-201ENST00000516817 103 ntBASIC1.68□□□□□ -2.14
SSSCA1O60232 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC1.68□□□□□ -2.14
SSSCA1O60232 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC1.68□□□□□ -2.14
SSSCA1O60232 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.68□□□□□ -2.14
SSSCA1O60232 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
SSSCA1O60232 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.68□□□□□ -2.14
SSSCA1O60232 AC074029.1-201ENST00000552531 1044 ntBASIC1.68□□□□□ -2.14
SSSCA1O60232 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
SSSCA1O60232 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC1.68□□□□□ -2.14
SSSCA1O60232 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC1.68□□□□□ -2.14
SSSCA1O60232 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC1.68□□□□□ -2.14
SSSCA1O60232 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC1.68□□□□□ -2.14
SSSCA1O60232 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC1.68□□□□□ -2.14
SSSCA1O60232 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC1.68□□□□□ -2.14
SSSCA1O60232 AC009090.3-201ENST00000616553 565 ntBASIC1.68□□□□□ -2.14
SSSCA1O60232 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
SSSCA1O60232 uc_338.20-201ENST00000621563 178 ntBASIC1.68□□□□□ -2.14
SSSCA1O60232 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC1.68□□□□□ -2.14
SSSCA1O60232 DUXAP9-208ENST00000622815 614 ntBASIC1.68□□□□□ -2.14
SSSCA1O60232 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC1.68□□□□□ -2.14
SSSCA1O60232 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.68□□□□□ -2.14
SSSCA1O60232 MTND4P35-201ENST00000604257 1375 ntBASIC1.68□□□□□ -2.14
SSSCA1O60232 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
SSSCA1O60232 RNA5SP184-201ENST00000411071 108 ntBASIC1.67□□□□□ -2.14
SSSCA1O60232 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.67□□□□□ -2.14
SSSCA1O60232 RPL21P32-201ENST00000419877 477 ntBASIC1.67□□□□□ -2.14
SSSCA1O60232 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.67□□□□□ -2.14
SSSCA1O60232 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC1.67□□□□□ -2.14
SSSCA1O60232 NUP35P1-201ENST00000422734 947 ntBASIC1.67□□□□□ -2.14
SSSCA1O60232 PTP4A1P7-201ENST00000423476 514 ntBASIC1.67□□□□□ -2.14
SSSCA1O60232 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.67□□□□□ -2.14
SSSCA1O60232 AL513175.1-201ENST00000431492 780 ntBASIC1.67□□□□□ -2.14
SSSCA1O60232 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.67□□□□□ -2.14
SSSCA1O60232 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC1.67□□□□□ -2.14
SSSCA1O60232 AL109933.2-201ENST00000452651 260 ntBASIC1.67□□□□□ -2.14
SSSCA1O60232 CCNB1IP1P3-201ENST00000454702 829 ntBASIC1.67□□□□□ -2.14
SSSCA1O60232 AC233279.1-201ENST00000455300 423 ntBASIC1.67□□□□□ -2.14
SSSCA1O60232 RNU7-26P-201ENST00000458980 63 ntBASIC1.67□□□□□ -2.14
SSSCA1O60232 RPL23AP49-201ENST00000492925 468 ntBASIC1.67□□□□□ -2.14
SSSCA1O60232 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC1.67□□□□□ -2.14
SSSCA1O60232 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC1.67□□□□□ -2.14
SSSCA1O60232 AC087272.1-201ENST00000523624 533 ntBASIC1.67□□□□□ -2.14
SSSCA1O60232 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC1.67□□□□□ -2.14
SSSCA1O60232 AC234778.2-201ENST00000566241 354 ntBASIC1.67□□□□□ -2.14
SSSCA1O60232 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC1.67□□□□□ -2.14
SSSCA1O60232 MIR548Y-201ENST00000582739 110 ntBASIC1.67□□□□□ -2.14
SSSCA1O60232 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.67□□□□□ -2.14
SSSCA1O60232 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.67□□□□□ -2.14
SSSCA1O60232 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.67□□□□□ -2.14
SSSCA1O60232 UBE2Q2P2-203ENST00000613592 761 ntBASIC1.67□□□□□ -2.14
SSSCA1O60232 HMGB1P24-202ENST00000615653 685 ntBASIC1.67□□□□□ -2.14
SSSCA1O60232 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC1.67□□□□□ -2.14
SSSCA1O60232 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC1.67□□□□□ -2.14
SSSCA1O60232 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC1.67□□□□□ -2.14
SSSCA1O60232 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC1.67□□□□□ -2.14
SSSCA1O60232 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC1.67□□□□□ -2.14
SSSCA1O60232 MIR203B-201ENST00000636080 86 ntBASIC1.67□□□□□ -2.14
SSSCA1O60232 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
SSSCA1O60232 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
SSSCA1O60232 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC1.66□□□□□ -2.14
SSSCA1O60232 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
SSSCA1O60232 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
SSSCA1O60232 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
SSSCA1O60232 RNA5SP171-201ENST00000391071 115 ntBASIC1.66□□□□□ -2.14
SSSCA1O60232 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.66□□□□□ -2.14
SSSCA1O60232 AL512504.1-201ENST00000415494 778 ntBASIC1.66□□□□□ -2.14
SSSCA1O60232 AC008280.1-201ENST00000418851 412 ntBASIC1.66□□□□□ -2.14
SSSCA1O60232 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.66□□□□□ -2.14
SSSCA1O60232 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC1.66□□□□□ -2.14
SSSCA1O60232 AL445687.1-201ENST00000439946 251 ntBASIC1.66□□□□□ -2.14
SSSCA1O60232 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC1.66□□□□□ -2.14
SSSCA1O60232 IPO7P1-201ENST00000442031 636 ntBASIC1.66□□□□□ -2.14
SSSCA1O60232 MTCYBP14-201ENST00000457471 715 ntBASIC1.66□□□□□ -2.14
SSSCA1O60232 RN7SL274P-201ENST00000492268 272 ntBASIC1.66□□□□□ -2.14
SSSCA1O60232 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC1.66□□□□□ -2.14
SSSCA1O60232 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC1.66□□□□□ -2.14
SSSCA1O60232 TRAV28-201ENST00000557548 323 ntBASIC1.66□□□□□ -2.14
SSSCA1O60232 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC1.66□□□□□ -2.14
SSSCA1O60232 AC024220.1-201ENST00000603675 484 ntBASIC1.66□□□□□ -2.14
SSSCA1O60232 AC135178.6-201ENST00000605314 398 ntBASIC1.66□□□□□ -2.14
SSSCA1O60232 AL359535.1-201ENST00000612100 1087 ntBASIC1.66□□□□□ -2.14
SSSCA1O60232 MIR7106-201ENST00000612419 65 ntBASIC1.66□□□□□ -2.14
SSSCA1O60232 AC004777.1-201ENST00000624317 287 ntBASIC1.66□□□□□ -2.14
SSSCA1O60232 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
SSSCA1O60232 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
SSSCA1O60232 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.66□□□□□ -2.14
SSSCA1O60232 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
SSSCA1O60232 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC1.65□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 139.1 ms