Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 HIGD1AP5-201ENST00000529959 259 ntBASIC2.02□□□□□ -2.09
HMGB3O15347 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
HMGB3O15347 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC2.02□□□□□ -2.09
HMGB3O15347 AC084033.1-201ENST00000550830 633 ntBASIC2.02□□□□□ -2.09
HMGB3O15347 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC2.02□□□□□ -2.09
HMGB3O15347 HMGB1P6-201ENST00000569046 646 ntBASIC2.02□□□□□ -2.09
HMGB3O15347 MIR5004-201ENST00000579078 107 ntBASIC2.02□□□□□ -2.09
HMGB3O15347 AC007448.1-201ENST00000582714 234 ntBASIC2.02□□□□□ -2.09
HMGB3O15347 MIR4658-201ENST00000584344 65 ntBASIC2.02□□□□□ -2.09
HMGB3O15347 TPMTP1-201ENST00000592307 737 ntBASIC2.02□□□□□ -2.09
HMGB3O15347 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.02□□□□□ -2.09
HMGB3O15347 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC2.02□□□□□ -2.09
HMGB3O15347 AC025588.4-201ENST00000615802 908 ntBASIC2.02□□□□□ -2.09
HMGB3O15347 CU459211.1-201ENST00000635667 749 ntBASIC2.02□□□□□ -2.09
HMGB3O15347 CRYM-AS1-204ENST00000637983 556 ntBASIC2.02□□□□□ -2.09
HMGB3O15347 AC130650.2-201ENST00000618736 2403 ntBASIC2.02□□□□□ -2.09
HMGB3O15347 CR848007.1-201ENST00000442354 1699 ntBASIC2.02□□□□□ -2.09
HMGB3O15347 TAB3P1-202ENST00000452645 1634 ntBASIC2.02□□□□□ -2.09
HMGB3O15347 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.01□□□□□ -2.09
HMGB3O15347 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC2.01□□□□□ -2.09
HMGB3O15347 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.01□□□□□ -2.09
HMGB3O15347 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
HMGB3O15347 AL512283.1-201ENST00000606756 1384 ntBASIC2.01□□□□□ -2.09
HMGB3O15347 AC009812.4-201ENST00000569134 1805 ntBASIC2.01□□□□□ -2.09
HMGB3O15347 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.01□□□□□ -2.09
HMGB3O15347 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
HMGB3O15347 ENSAP3-201ENST00000312710 333 ntBASIC2.01□□□□□ -2.09
HMGB3O15347 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
HMGB3O15347 AL596028.1-201ENST00000326971 197 ntBASIC2.01□□□□□ -2.09
HMGB3O15347 RNU1-112P-201ENST00000364401 164 ntBASIC2.01□□□□□ -2.09
HMGB3O15347 SNORA18.3-201ENST00000384122 132 ntBASIC2.01□□□□□ -2.09
HMGB3O15347 MIR649-201ENST00000384843 97 ntBASIC2.01□□□□□ -2.09
HMGB3O15347 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
HMGB3O15347 SNORA48.5-201ENST00000391143 135 ntBASIC2.01□□□□□ -2.09
HMGB3O15347 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
HMGB3O15347 PTMAP2-201ENST00000397627 327 ntBASIC2.01□□□□□ -2.09
HMGB3O15347 ATP5F1P6-201ENST00000402768 767 ntBASIC2.01□□□□□ -2.09
HMGB3O15347 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC2.01□□□□□ -2.09
HMGB3O15347 AL513331.1-201ENST00000411908 397 ntBASIC2.01□□□□□ -2.09
HMGB3O15347 AF274854.1-201ENST00000413236 615 ntBASIC2.01□□□□□ -2.09
HMGB3O15347 Z75741.2-201ENST00000417272 1167 ntBASIC2.01□□□□□ -2.09
HMGB3O15347 RPL36AP36-201ENST00000418616 301 ntBASIC2.01□□□□□ -2.09
HMGB3O15347 PAICSP7-201ENST00000419829 962 ntBASIC2.01□□□□□ -2.09
HMGB3O15347 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.01□□□□□ -2.09
HMGB3O15347 GCA-203ENST00000429691 824 ntTSL 3 BASIC2.01□□□□□ -2.09
HMGB3O15347 AL451074.3-201ENST00000437709 472 ntBASIC2.01□□□□□ -2.09
HMGB3O15347 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.01□□□□□ -2.09
HMGB3O15347 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC2.01□□□□□ -2.09
HMGB3O15347 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC2.01□□□□□ -2.09
HMGB3O15347 AC011816.1-201ENST00000441346 546 ntBASIC2.01□□□□□ -2.09
HMGB3O15347 WASF1P1-201ENST00000447560 1131 ntBASIC2.01□□□□□ -2.09
HMGB3O15347 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC2.01□□□□□ -2.09
HMGB3O15347 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.01□□□□□ -2.09
HMGB3O15347 RPS29P26-201ENST00000477483 171 ntBASIC2.01□□□□□ -2.09
HMGB3O15347 VPS26AP1-201ENST00000483197 979 ntBASIC2.01□□□□□ -2.09
HMGB3O15347 FAM172BP-201ENST00000487497 1089 ntBASIC2.01□□□□□ -2.09
HMGB3O15347 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.01□□□□□ -2.09
HMGB3O15347 MTCO1P31-201ENST00000506355 492 ntBASIC2.01□□□□□ -2.09
HMGB3O15347 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC2.01□□□□□ -2.09
HMGB3O15347 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.01□□□□□ -2.09
HMGB3O15347 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.01□□□□□ -2.09
HMGB3O15347 HIGD1AP6-201ENST00000521833 279 ntBASIC2.01□□□□□ -2.09
HMGB3O15347 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.01□□□□□ -2.09
HMGB3O15347 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC2.01□□□□□ -2.09
HMGB3O15347 AC068339.2-201ENST00000534395 618 ntBASIC2.01□□□□□ -2.09
HMGB3O15347 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.01□□□□□ -2.09
HMGB3O15347 GLYCAM1-201ENST00000546596 285 ntBASIC2.01□□□□□ -2.09
HMGB3O15347 AC004217.3-201ENST00000551552 878 ntBASIC2.01□□□□□ -2.09
HMGB3O15347 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
HMGB3O15347 TRAV28-201ENST00000557548 323 ntBASIC2.01□□□□□ -2.09
HMGB3O15347 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.01□□□□□ -2.09
HMGB3O15347 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC2.01□□□□□ -2.09
HMGB3O15347 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.01□□□□□ -2.09
HMGB3O15347 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.01□□□□□ -2.09
HMGB3O15347 RPS15AP11-201ENST00000594193 385 ntBASIC2.01□□□□□ -2.09
HMGB3O15347 AC006539.2-201ENST00000601729 572 ntBASIC2.01□□□□□ -2.09
HMGB3O15347 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC2.01□□□□□ -2.09
HMGB3O15347 AL645944.1-201ENST00000603857 493 ntBASIC2.01□□□□□ -2.09
HMGB3O15347 AC016542.1-201ENST00000608259 493 ntBASIC2.01□□□□□ -2.09
HMGB3O15347 AC021851.1-201ENST00000608537 1082 ntBASIC2.01□□□□□ -2.09
HMGB3O15347 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.01□□□□□ -2.09
HMGB3O15347 AC245884.12-201ENST00000615364 59 ntBASIC2.01□□□□□ -2.09
HMGB3O15347 AC025016.1-201ENST00000616746 682 ntBASIC2.01□□□□□ -2.09
HMGB3O15347 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.01□□□□□ -2.09
HMGB3O15347 AC098657.3-201ENST00000620434 263 ntBASIC2.01□□□□□ -2.09
HMGB3O15347 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC2.01□□□□□ -2.09
HMGB3O15347 AC083865.1-201ENST00000636634 831 ntBASIC2.01□□□□□ -2.09
HMGB3O15347 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
HMGB3O15347 SNORA68.1-201ENST00000364537 132 ntBASIC2□□□□□ -2.09
HMGB3O15347 SNORA62.3-201ENST00000365110 153 ntBASIC2□□□□□ -2.09
HMGB3O15347 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC2□□□□□ -2.09
HMGB3O15347 RNU6-301P-201ENST00000384277 107 ntBASIC2□□□□□ -2.09
HMGB3O15347 MIR9-1-201ENST00000385198 89 ntBASIC2□□□□□ -2.09
HMGB3O15347 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC2□□□□□ -2.09
HMGB3O15347 AL138827.1-201ENST00000402666 306 ntBASIC2□□□□□ -2.09
HMGB3O15347 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2□□□□□ -2.09
HMGB3O15347 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC2□□□□□ -2.09
HMGB3O15347 AL035410.1-201ENST00000427409 427 ntBASIC2□□□□□ -2.09
HMGB3O15347 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2□□□□□ -2.09
HMGB3O15347 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms