Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 GABPAP-201ENST00000419271 1356 ntBASIC3.08□□□□□ -1.92
CDX4O14627 ZNF37BP-203ENST00000452306 1352 ntBASIC3.08□□□□□ -1.92
CDX4O14627 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CDX4O14627 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
CDX4O14627 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CDX4O14627 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CDX4O14627 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
CDX4O14627 AC130650.2-201ENST00000618736 2403 ntBASIC3.07□□□□□ -1.92
CDX4O14627 SNORD116-2-201ENST00000384274 95 ntBASIC3.07□□□□□ -1.92
CDX4O14627 Y_RNA.465-201ENST00000384293 102 ntBASIC3.07□□□□□ -1.92
CDX4O14627 SNORD116-6-201ENST00000384711 96 ntBASIC3.07□□□□□ -1.92
CDX4O14627 HMGN2P8-201ENST00000391458 268 ntBASIC3.07□□□□□ -1.92
CDX4O14627 AL049545.1-201ENST00000401856 572 ntBASIC3.07□□□□□ -1.92
CDX4O14627 MIR1261-201ENST00000408659 82 ntBASIC3.07□□□□□ -1.92
CDX4O14627 RNA5SP229-201ENST00000410809 99 ntBASIC3.07□□□□□ -1.92
CDX4O14627 LUZP4P1-201ENST00000415420 344 ntBASIC3.07□□□□□ -1.92
CDX4O14627 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.07□□□□□ -1.92
CDX4O14627 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.07□□□□□ -1.92
CDX4O14627 FGF7P5-201ENST00000441829 291 ntBASIC3.07□□□□□ -1.92
CDX4O14627 NECAP1P2-201ENST00000455668 727 ntBASIC3.07□□□□□ -1.92
CDX4O14627 AL122001.1-201ENST00000457027 370 ntBASIC3.07□□□□□ -1.92
CDX4O14627 AP001086.1-201ENST00000494882 321 ntBASIC3.07□□□□□ -1.92
CDX4O14627 AC010486.2-201ENST00000505572 483 ntBASIC3.07□□□□□ -1.92
CDX4O14627 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.07□□□□□ -1.92
CDX4O14627 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.07□□□□□ -1.92
CDX4O14627 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.07□□□□□ -1.92
CDX4O14627 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.07□□□□□ -1.92
CDX4O14627 OR5AP1P-201ENST00000529730 940 ntBASIC3.07□□□□□ -1.92
CDX4O14627 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC3.07□□□□□ -1.92
CDX4O14627 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.07□□□□□ -1.92
CDX4O14627 AC007834.2-201ENST00000536310 343 ntBASIC3.07□□□□□ -1.92
CDX4O14627 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CDX4O14627 AC023050.2-201ENST00000544968 387 ntBASIC3.07□□□□□ -1.92
CDX4O14627 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CDX4O14627 AC091515.1-201ENST00000548110 679 ntBASIC3.07□□□□□ -1.92
CDX4O14627 AC090502.2-201ENST00000549267 280 ntBASIC3.07□□□□□ -1.92
CDX4O14627 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.07□□□□□ -1.92
CDX4O14627 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.07□□□□□ -1.92
CDX4O14627 AC008088.1-201ENST00000580993 280 ntBASIC3.07□□□□□ -1.92
CDX4O14627 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CDX4O14627 AC004987.4-201ENST00000603383 338 ntBASIC3.07□□□□□ -1.92
CDX4O14627 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC3.07□□□□□ -1.92
CDX4O14627 IGHVIII-44-202ENST00000636235 289 ntBASIC3.07□□□□□ -1.92
CDX4O14627 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.07□□□□□ -1.92
CDX4O14627 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CDX4O14627 AL157700.1-201ENST00000561973 1432 ntBASIC3.07□□□□□ -1.92
CDX4O14627 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.07□□□□□ -1.92
CDX4O14627 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CDX4O14627 FAM35BP-202ENST00000497389 3337 ntBASIC3.07□□□□□ -1.92
CDX4O14627 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
CDX4O14627 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
CDX4O14627 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CDX4O14627 OR1S2-201ENST00000302592 978 ntBASIC3.06□□□□□ -1.92
CDX4O14627 CASP3-203ENST00000393588 677 ntTSL 4 BASIC3.06□□□□□ -1.92
CDX4O14627 AL391417.1-201ENST00000404100 426 ntBASIC3.06□□□□□ -1.92
CDX4O14627 AL024474.1-201ENST00000404655 591 ntBASIC3.06□□□□□ -1.92
CDX4O14627 AL138878.1-201ENST00000405131 347 ntBASIC3.06□□□□□ -1.92
CDX4O14627 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.06□□□□□ -1.92
CDX4O14627 RN7SKP56-201ENST00000410513 331 ntBASIC3.06□□□□□ -1.92
CDX4O14627 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC3.06□□□□□ -1.92
CDX4O14627 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC3.06□□□□□ -1.92
CDX4O14627 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CDX4O14627 AL161449.1-201ENST00000414531 1199 ntBASIC3.06□□□□□ -1.92
CDX4O14627 ELOCP9-201ENST00000418624 239 ntBASIC3.06□□□□□ -1.92
CDX4O14627 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.06□□□□□ -1.92
CDX4O14627 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC3.06□□□□□ -1.92
CDX4O14627 OFD1P18Y-201ENST00000420889 959 ntBASIC3.06□□□□□ -1.92
CDX4O14627 AC012065.2-201ENST00000421295 375 ntBASIC3.06□□□□□ -1.92
CDX4O14627 AL365338.1-201ENST00000422282 858 ntBASIC3.06□□□□□ -1.92
CDX4O14627 AC005517.2-201ENST00000424673 553 ntBASIC3.06□□□□□ -1.92
CDX4O14627 AL672296.1-201ENST00000427780 2158 ntBASIC3.06□□□□□ -1.92
CDX4O14627 GDI2P1-201ENST00000429312 1336 ntBASIC3.06□□□□□ -1.92
CDX4O14627 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.06□□□□□ -1.92
CDX4O14627 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CDX4O14627 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.06□□□□□ -1.92
CDX4O14627 AC093156.1-201ENST00000440382 670 ntBASIC3.06□□□□□ -1.92
CDX4O14627 Z83846.1-201ENST00000446798 265 ntBASIC3.06□□□□□ -1.92
CDX4O14627 RPL23AP67-201ENST00000465341 474 ntBASIC3.06□□□□□ -1.92
CDX4O14627 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC3.06□□□□□ -1.92
CDX4O14627 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CDX4O14627 RPS3AP50-201ENST00000487064 803 ntBASIC3.06□□□□□ -1.92
CDX4O14627 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC3.06□□□□□ -1.92
CDX4O14627 AC068305.1-201ENST00000497406 726 ntBASIC3.06□□□□□ -1.92
CDX4O14627 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.06□□□□□ -1.92
CDX4O14627 AC034244.1-201ENST00000507687 207 ntBASIC3.06□□□□□ -1.92
CDX4O14627 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CDX4O14627 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.06□□□□□ -1.92
CDX4O14627 AC005921.1-201ENST00000510589 286 ntBASIC3.06□□□□□ -1.92
CDX4O14627 AC109445.1-201ENST00000512356 383 ntBASIC3.06□□□□□ -1.92
CDX4O14627 SNORA70.14-201ENST00000516205 110 ntBASIC3.06□□□□□ -1.92
CDX4O14627 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.06□□□□□ -1.92
CDX4O14627 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.06□□□□□ -1.92
CDX4O14627 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CDX4O14627 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC3.06□□□□□ -1.92
CDX4O14627 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC3.06□□□□□ -1.92
CDX4O14627 OR5D17P-201ENST00000531492 978 ntBASIC3.06□□□□□ -1.92
CDX4O14627 AP003385.6-201ENST00000531603 374 ntBASIC3.06□□□□□ -1.92
CDX4O14627 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.06□□□□□ -1.92
CDX4O14627 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.06□□□□□ -1.92
CDX4O14627 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 132 ms