Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 LARP1BP2-201ENST00000486594 519 ntBASIC4.33□□□□□ -1.72
FOXN3O00409 RPS26P15-201ENST00000488067 348 ntBASIC4.33□□□□□ -1.72
FOXN3O00409 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.33□□□□□ -1.72
FOXN3O00409 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.33□□□□□ -1.72
FOXN3O00409 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
FOXN3O00409 AC005921.1-201ENST00000510589 286 ntBASIC4.33□□□□□ -1.72
FOXN3O00409 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
FOXN3O00409 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC4.33□□□□□ -1.72
FOXN3O00409 RNU6-720P-201ENST00000516363 108 ntBASIC4.33□□□□□ -1.72
FOXN3O00409 SNORA31.20-201ENST00000517111 133 ntBASIC4.33□□□□□ -1.72
FOXN3O00409 IGKV2D-23-201ENST00000518179 286 ntBASIC4.33□□□□□ -1.72
FOXN3O00409 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.33□□□□□ -1.72
FOXN3O00409 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.33□□□□□ -1.72
FOXN3O00409 MTCYBP41-201ENST00000528913 1123 ntBASIC4.33□□□□□ -1.72
FOXN3O00409 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.33□□□□□ -1.72
FOXN3O00409 AC087481.2-201ENST00000565492 330 ntBASIC4.33□□□□□ -1.72
FOXN3O00409 AL356432.3-201ENST00000568952 465 ntBASIC4.33□□□□□ -1.72
FOXN3O00409 MIR3913-1-201ENST00000577744 102 ntBASIC4.33□□□□□ -1.72
FOXN3O00409 MIR3939-201ENST00000582614 106 ntBASIC4.33□□□□□ -1.72
FOXN3O00409 MIR4801-201ENST00000582704 82 ntBASIC4.33□□□□□ -1.72
FOXN3O00409 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC4.33□□□□□ -1.72
FOXN3O00409 AL391813.2-201ENST00000609113 322 ntBASIC4.33□□□□□ -1.72
FOXN3O00409 AL355472.4-201ENST00000610233 626 ntBASIC4.33□□□□□ -1.72
FOXN3O00409 AC022306.2-201ENST00000617563 647 ntBASIC4.33□□□□□ -1.72
FOXN3O00409 AC012150.2-201ENST00000621300 544 ntBASIC4.33□□□□□ -1.72
FOXN3O00409 AL160394.1-201ENST00000624765 724 ntBASIC4.33□□□□□ -1.72
FOXN3O00409 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.33□□□□□ -1.72
FOXN3O00409 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
FOXN3O00409 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
FOXN3O00409 AC009902.3-201ENST00000606235 2172 ntBASIC4.33□□□□□ -1.72
FOXN3O00409 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
FOXN3O00409 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.32□□□□□ -1.72
FOXN3O00409 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
FOXN3O00409 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.32□□□□□ -1.72
FOXN3O00409 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
FOXN3O00409 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
FOXN3O00409 RNA5SP189-201ENST00000364920 115 ntBASIC4.32□□□□□ -1.72
FOXN3O00409 RNU6-1042P-201ENST00000384204 107 ntBASIC4.32□□□□□ -1.72
FOXN3O00409 MIR135A2-201ENST00000384854 100 ntBASIC4.32□□□□□ -1.72
FOXN3O00409 MIR141-201ENST00000384975 95 ntBASIC4.32□□□□□ -1.72
FOXN3O00409 MRPL42P2-201ENST00000403169 426 ntBASIC4.32□□□□□ -1.72
FOXN3O00409 RNU2-37P-201ENST00000410695 177 ntBASIC4.32□□□□□ -1.72
FOXN3O00409 RNU2-16P-201ENST00000410712 136 ntBASIC4.32□□□□□ -1.72
FOXN3O00409 RNA5SP39-201ENST00000411245 120 ntBASIC4.32□□□□□ -1.72
FOXN3O00409 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC4.32□□□□□ -1.72
FOXN3O00409 ELOCP17-201ENST00000414751 326 ntBASIC4.32□□□□□ -1.72
FOXN3O00409 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC4.32□□□□□ -1.72
FOXN3O00409 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC4.32□□□□□ -1.72
FOXN3O00409 AC233728.2-201ENST00000425348 757 ntBASIC4.32□□□□□ -1.72
FOXN3O00409 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.32□□□□□ -1.72
FOXN3O00409 ISCA1P6-201ENST00000427740 390 ntBASIC4.32□□□□□ -1.72
FOXN3O00409 C8orf59P1-201ENST00000429930 303 ntBASIC4.32□□□□□ -1.72
FOXN3O00409 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.32□□□□□ -1.72
FOXN3O00409 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC4.32□□□□□ -1.72
FOXN3O00409 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC4.32□□□□□ -1.72
FOXN3O00409 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.32□□□□□ -1.72
FOXN3O00409 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.32□□□□□ -1.72
FOXN3O00409 RPL7P28-201ENST00000437739 740 ntBASIC4.32□□□□□ -1.72
FOXN3O00409 FTH1P1-201ENST00000437933 532 ntBASIC4.32□□□□□ -1.72
FOXN3O00409 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.32□□□□□ -1.72
FOXN3O00409 TPT1P14-201ENST00000448018 505 ntBASIC4.32□□□□□ -1.72
FOXN3O00409 AL162151.2-201ENST00000448875 158 ntBASIC4.32□□□□□ -1.72
FOXN3O00409 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.32□□□□□ -1.72
FOXN3O00409 RPL38P1-201ENST00000460914 211 ntBASIC4.32□□□□□ -1.72
FOXN3O00409 RN7SL271P-201ENST00000487601 295 ntBASIC4.32□□□□□ -1.72
FOXN3O00409 AC078918.1-201ENST00000498515 228 ntBASIC4.32□□□□□ -1.72
FOXN3O00409 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.32□□□□□ -1.72
FOXN3O00409 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC4.32□□□□□ -1.72
FOXN3O00409 RN7SKP298-201ENST00000515950 94 ntBASIC4.32□□□□□ -1.72
FOXN3O00409 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.32□□□□□ -1.72
FOXN3O00409 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.32□□□□□ -1.72
FOXN3O00409 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC4.32□□□□□ -1.72
FOXN3O00409 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.32□□□□□ -1.72
FOXN3O00409 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC4.32□□□□□ -1.72
FOXN3O00409 SNORD84-203ENST00000584275 78 ntBASIC4.32□□□□□ -1.72
FOXN3O00409 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.32□□□□□ -1.72
FOXN3O00409 AC006254.3-201ENST00000603353 884 ntBASIC4.32□□□□□ -1.72
FOXN3O00409 AC091805.2-201ENST00000603848 235 ntBASIC4.32□□□□□ -1.72
FOXN3O00409 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
FOXN3O00409 WT1-AS_8.1-201ENST00000615200 275 ntBASIC4.32□□□□□ -1.72
FOXN3O00409 AP001506.1-201ENST00000615444 211 ntBASIC4.32□□□□□ -1.72
FOXN3O00409 MLECP1-201ENST00000615893 709 ntBASIC4.32□□□□□ -1.72
FOXN3O00409 AC099654.13-201ENST00000639774 207 ntBASIC4.32□□□□□ -1.72
FOXN3O00409 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.32□□□□□ -1.72
FOXN3O00409 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
FOXN3O00409 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC4.32□□□□□ -1.72
FOXN3O00409 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
FOXN3O00409 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
FOXN3O00409 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
FOXN3O00409 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
FOXN3O00409 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
FOXN3O00409 GABPAP-201ENST00000419271 1356 ntBASIC4.31□□□□□ -1.72
FOXN3O00409 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
FOXN3O00409 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
FOXN3O00409 SNORA60-201ENST00000362396 134 ntBASIC4.31□□□□□ -1.72
FOXN3O00409 Y_RNA.41-201ENST00000362646 102 ntBASIC4.31□□□□□ -1.72
FOXN3O00409 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.31□□□□□ -1.72
FOXN3O00409 Y_RNA.516-201ENST00000384541 124 ntBASIC4.31□□□□□ -1.72
FOXN3O00409 CCDC58P2-201ENST00000417131 366 ntBASIC4.31□□□□□ -1.72
FOXN3O00409 BEND7P1-201ENST00000422058 457 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms